Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030539
CDS Infomation

pacid=37472391 polypeptide=PGSC0003DMP400020735 locus=PGSC0003DMG400011694 ID=PGSC0003DMT400030539.v4.03 annot-version=v4.03
Sequence

ATGGATCTCCAGGAGTCGATCACCAATCAGACGGACGTTTCTTTCATGCTTGCTAAGCAC
ATTTTCTCAAAAGAGGTTAATGGCGATACCAATCTGGTGCTCTCTCCTCTCTCAATTCAA
ATAGCACTTGGCCTCATTGCTGCTGGCTCTAATGGACCAACTCAAGATCAGCTGCTCTGT
TTTCTCAAGTCAATATCAATTAATGAACTCAACTCTCTTTATTCTTATCTTGTCGACACC
GTCTTTGTTGATGGAAGCCCCAATGGAGGTCCGTGTTTGTCCATTGCTAATGGTGTTTGG
ATCGACCAATCACTTCCTTTCAAGCATTCTTTCAAACACGTTGTGGATAATGTTTACAAG
GCCGCTTCTGAGTATGTTGATTTTCAGAACAAGCCTGCTGAGGTTGCCAATCAAGTGAAT
CAGTGGGCTAAAATGAAGACAAATGATCTCATCAAAGAGATTCTTCCTCCAGACGCGGTG
GATGACATGACGAGGCTCATCTTTGCCAATGCACTATATTTTAAAGGAGAATGGAATGAG
AAGTTCTATGCTTTCGAAACAAAAAACCACGAATTCCATCTCCTCAATGAAGGGTCTGTT
CGAGCACCCTTCATGACTAGCCAGAAGGAGCAGTACATAACAGCCTTTGATGGCTTTAAA
ATGTTGAGGCTTCCTTATAAACAGGGCATGGACACTCGTCGCTTCTGTATGTATTTCATT
CTGCCTGATGCCCGTGATGGATTACCTGCTTTACTGGACAAAATCAGTTCAGAACCTGGA
TTTTTAAACCGGCATTTCCCATATGAAAAAGTTAAAGCACGCAAATTTCTCATCCCTAAA
TTCAAAATAACTTTCGGGTTTGAAGCTACTAAAGTTCTATGGGGGCTTGGCCTCGAATCA
CCTTTCTCTCCGGGTGGTCTCACTGAGATGGTTGATTCCCATATATCTAAGAAACTGTTT
GTTTCAGATGTTTATCACAAGTCCTTCATTGAGGTAAATGAGGAAGGAACTGAAGCTGCA
GCTGTTACCGCTGTCATAGTAATGTTGCAGTCTAAATGCGTGAGCATTGAGAAGGAAATT
GACTTTGTCGCGGACCATCCATTCTTGTTCCTTGTAAGAGAAGAATCTACTGGTGCGATG
TTGTTCCTAGGGAGCGTGATGAATCCTCTTGCTGGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400020735
PEP Infomation

pacid=37472391 transcript=PGSC0003DMT400030539 locus=PGSC0003DMG400011694 ID=PGSC0003DMT400030539.v4.03 annot-version=v4.03
Sequence

MDLQESITNQTDVSFMLAKHIFSKEVNGDTNLVLSPLSIQIALGLIAAGSNGPTQDQLLC
FLKSISINELNSLYSYLVDTVFVDGSPNGGPCLSIANGVWIDQSLPFKHSFKHVVDNVYK
AASEYVDFQNKPAEVANQVNQWAKMKTNDLIKEILPPDAVDDMTRLIFANALYFKGEWNE
KFYAFETKNHEFHLLNEGSVRAPFMTSQKEQYITAFDGFKMLRLPYKQGMDTRRFCMYFI
LPDARDGLPALLDKISSEPGFLNRHFPYEKVKARKFLIPKFKITFGFEATKVLWGLGLES
PFSPGGLTEMVDSHISKKLFVSDVYHKSFIEVNEEGTEAAAVTAVIVMLQSKCVSIEKEI
DFVADHPFLFLVREESTGAMLFLGSVMNPLAG*

Transcript Sequence

Transcript ID

PGSC0003DMT400030539
Transcript Infomation

pacid=37472391 locus=PGSC0003DMG400011694 ID=PGSC0003DMT400030539.v4.03 annot-version=v4.03
Sequence

ATGGATCTCCAGGAGTCGATCACCAATCAGACGGACGTTTCTTTCATGCTTGCTAAGCAC
ATTTTCTCAAAAGAGGTTAATGGCGATACCAATCTGGTGCTCTCTCCTCTCTCAATTCAA
ATAGCACTTGGCCTCATTGCTGCTGGCTCTAATGGACCAACTCAAGATCAGCTGCTCTGT
TTTCTCAAGTCAATATCAATTAATGAACTCAACTCTCTTTATTCTTATCTTGTCGACACC
GTCTTTGTTGATGGAAGCCCCAATGGAGGTCCGTGTTTGTCCATTGCTAATGGTGTTTGG
ATCGACCAATCACTTCCTTTCAAGCATTCTTTCAAACACGTTGTGGATAATGTTTACAAG
GCCGCTTCTGAGTATGTTGATTTTCAGAACAAGCCTGCTGAGGTTGCCAATCAAGTGAAT
CAGTGGGCTAAAATGAAGACAAATGATCTCATCAAAGAGATTCTTCCTCCAGACGCGGTG
GATGACATGACGAGGCTCATCTTTGCCAATGCACTATATTTTAAAGGAGAATGGAATGAG
AAGTTCTATGCTTTCGAAACAAAAAACCACGAATTCCATCTCCTCAATGAAGGGTCTGTT
CGAGCACCCTTCATGACTAGCCAGAAGGAGCAGTACATAACAGCCTTTGATGGCTTTAAA
ATGTTGAGGCTTCCTTATAAACAGGGCATGGACACTCGTCGCTTCTGTATGTATTTCATT
CTGCCTGATGCCCGTGATGGATTACCTGCTTTACTGGACAAAATCAGTTCAGAACCTGGA
TTTTTAAACCGGCATTTCCCATATGAAAAAGTTAAAGCACGCAAATTTCTCATCCCTAAA
TTCAAAATAACTTTCGGGTTTGAAGCTACTAAAGTTCTATGGGGGCTTGGCCTCGAATCA
CCTTTCTCTCCGGGTGGTCTCACTGAGATGGTTGATTCCCATATATCTAAGAAACTGTTT
GTTTCAGATGTTTATCACAAGTCCTTCATTGAGGTAAATGAGGAAGGAACTGAAGCTGCA
GCTGTTACCGCTGTCATAGTAATGTTGCAGTCTAAATGCGTGAGCATTGAGAAGGAAATT
GACTTTGTCGCGGACCATCCATTCTTGTTCCTTGTAAGAGAAGAATCTACTGGTGCGATG
TTGTTCCTAGGGAGCGTGATGAATCCTCTTGCTGGTTAG