Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030533
CDS Infomation

pacid=37472523 polypeptide=PGSC0003DMP400020731 locus=PGSC0003DMG400011692 ID=PGSC0003DMT400030533.v4.03 annot-version=v4.03
Sequence

ATGGGGATTTGCAGAAATGTCAAGACTGAAGAAAATCAACTTCAAAAGAAGGGGGGAACT
AGAGCAGCTCTTTTTGTCTATGTTGTGGCGGGGGTTGATACCATGGCTTTTATTTCAAAG
GGTGTGAGCCTGGTGACTTACTTCTCTGGGTATATGAACTTCAGCTTAACAAAATCTGCC
AACACTGTGACAAACTTCATGGGAACAGCGTTTTTGCTCTCATTATTTGGAGCTTTTCTC
TCAGATACTTACTTCTCCAGATTCAAGACTTGTGTTCTATTTAGCATCATTCAAGTTTTG
GGATATGCACTACTAGGAGTTCAAGCGCATTTCAGCCAACTGAGACCATTTCCCTGCAAG
GATGTACCTTTAAGCCAAAACGATCGATGTGAATCTGCAGATGCAGGCCAATTGGCAATC
TTGTATGGAGGTGTTTATCTGATAGCACTTGGAAACAGTGGAGTAAAAGCAGCTTTGCCA
TCATTGGGTGCTGATCAATTTGATGAAAAGGATCCCAAAGGGGCTGCTAAGCTATCAAGT
TACTTCAATTGGCTGCTGTTCTTCATCACCATTGGAGCCATGCTTGGAGTTACATTGTTT
GTTTGGATAGGTGACAATCAGGGATGGGATTGGTCATTTGGTATCTCCTCTGTAGCAGTT
GGATTGTCAATCCTACTCTTGACCATGGGAAAACAGTTCTACAGATACAATGTTCCTAAA
GGAAGCCCTCTGATGCGTATTTCGCAGGTTCTTGTTGCAGCTTTCAGAAACAGAAATCTC
CCACTACCACAAAACAAAGAAGATTTACATCAGATCAGAAGTGGAGAGGCTGAAAATGGA
ATAGAGATTATTCAAAGGACTGATCAATTCAAATGTTTGGACAGGGCAGCCATACCGAGG
AACAACCAAGAAGCATCCACATCAAATGCTCATGGACCATGGAGCCTTTGTACTATCTCA
CAAGTTGAAGAAACAAAGATTGTAGTCAGAATGCTACCAATTATACTGAGCACCGTCTTC
ATGAACACTTGTATGGCTCAACTCCAGACCTTCACTATCCAACAAAGCATGACAATGAAC
AGGAAAATTGGAAACTTTGAACTCCCAGCGCCTTCCATACCTGTAATTCCTCAAATATTC
CAACTCATCATGATCCCAGTCTATGATCGCATCTTTGTTCCGATAGCAAGAAAATTCACA
GGGATCCCTTCTGGGATTCGACAACTGCAACGTATAGGTGTTGGGCTAATACTTTCAATA
GTATCTATGGCAGTGTCTGCAGTTGTAGAAAGTCGCCGGAAATCAGTTGCCATTGAGCAT
AACATGGTTGACTCAGCCAATCAATTACCTATGAGTGTGTTCTGGCTTGGATTTCAATTT
GTAATATTTGCAACAGCTGAAATACTTACATTGGTAGGGCTGTTGGATTTCTTCTATGCA
GAGAGCACATCAGGCATGAAATCACTGAGTATGGCCATTACTTGGTGTTCACTGGCATTC
GGGTACTTCACAAGCTCAGTAGTGGTGAGTGTAATTAACAAGGTGAGTGGTGGCTGGTTA
GCTAATAACAACTTGAACAGAGACAAGCTCGACTACTTCTACTGGTTGCTCGCAGCAGTC
AGTGTGCTGAACTTTGGCTTCTACTTACTCTGTGCTTCTTGGTACAAGTATAAGAAGCCA
GAACTGAACCAAGAAGGTCCTATCTCTGATGAGAAGCCTAAGGGAAAAACTGAAATGCGT
GTTGTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400020731
PEP Infomation

pacid=37472523 transcript=PGSC0003DMT400030533 locus=PGSC0003DMG400011692 ID=PGSC0003DMT400030533.v4.03 annot-version=v4.03
Sequence

MGICRNVKTEENQLQKKGGTRAALFVYVVAGVDTMAFISKGVSLVTYFSGYMNFSLTKSA
NTVTNFMGTAFLLSLFGAFLSDTYFSRFKTCVLFSIIQVLGYALLGVQAHFSQLRPFPCK
DVPLSQNDRCESADAGQLAILYGGVYLIALGNSGVKAALPSLGADQFDEKDPKGAAKLSS
YFNWLLFFITIGAMLGVTLFVWIGDNQGWDWSFGISSVAVGLSILLLTMGKQFYRYNVPK
GSPLMRISQVLVAAFRNRNLPLPQNKEDLHQIRSGEAENGIEIIQRTDQFKCLDRAAIPR
NNQEASTSNAHGPWSLCTISQVEETKIVVRMLPIILSTVFMNTCMAQLQTFTIQQSMTMN
RKIGNFELPAPSIPVIPQIFQLIMIPVYDRIFVPIARKFTGIPSGIRQLQRIGVGLILSI
VSMAVSAVVESRRKSVAIEHNMVDSANQLPMSVFWLGFQFVIFATAEILTLVGLLDFFYA
ESTSGMKSLSMAITWCSLAFGYFTSSVVVSVINKVSGGWLANNNLNRDKLDYFYWLLAAV
SVLNFGFYLLCASWYKYKKPELNQEGPISDEKPKGKTEMRVV*

Transcript Sequence

Transcript ID

PGSC0003DMT400030533
Transcript Infomation

pacid=37472523 locus=PGSC0003DMG400011692 ID=PGSC0003DMT400030533.v4.03 annot-version=v4.03
Sequence

ATGGGGATTTGCAGAAATGTCAAGACTGAAGAAAATCAACTTCAAAAGAAGGGGGGAACT
AGAGCAGCTCTTTTTGTCTATGTTGTGGCGGGGGTTGATACCATGGCTTTTATTTCAAAG
GGTGTGAGCCTGGTGACTTACTTCTCTGGGTATATGAACTTCAGCTTAACAAAATCTGCC
AACACTGTGACAAACTTCATGGGAACAGCGTTTTTGCTCTCATTATTTGGAGCTTTTCTC
TCAGATACTTACTTCTCCAGATTCAAGACTTGTGTTCTATTTAGCATCATTCAAGTTTTG
GGATATGCACTACTAGGAGTTCAAGCGCATTTCAGCCAACTGAGACCATTTCCCTGCAAG
GATGTACCTTTAAGCCAAAACGATCGATGTGAATCTGCAGATGCAGGCCAATTGGCAATC
TTGTATGGAGGTGTTTATCTGATAGCACTTGGAAACAGTGGAGTAAAAGCAGCTTTGCCA
TCATTGGGTGCTGATCAATTTGATGAAAAGGATCCCAAAGGGGCTGCTAAGCTATCAAGT
TACTTCAATTGGCTGCTGTTCTTCATCACCATTGGAGCCATGCTTGGAGTTACATTGTTT
GTTTGGATAGGTGACAATCAGGGATGGGATTGGTCATTTGGTATCTCCTCTGTAGCAGTT
GGATTGTCAATCCTACTCTTGACCATGGGAAAACAGTTCTACAGATACAATGTTCCTAAA
GGAAGCCCTCTGATGCGTATTTCGCAGGTTCTTGTTGCAGCTTTCAGAAACAGAAATCTC
CCACTACCACAAAACAAAGAAGATTTACATCAGATCAGAAGTGGAGAGGCTGAAAATGGA
ATAGAGATTATTCAAAGGACTGATCAATTCAAATGTTTGGACAGGGCAGCCATACCGAGG
AACAACCAAGAAGCATCCACATCAAATGCTCATGGACCATGGAGCCTTTGTACTATCTCA
CAAGTTGAAGAAACAAAGATTGTAGTCAGAATGCTACCAATTATACTGAGCACCGTCTTC
ATGAACACTTGTATGGCTCAACTCCAGACCTTCACTATCCAACAAAGCATGACAATGAAC
AGGAAAATTGGAAACTTTGAACTCCCAGCGCCTTCCATACCTGTAATTCCTCAAATATTC
CAACTCATCATGATCCCAGTCTATGATCGCATCTTTGTTCCGATAGCAAGAAAATTCACA
GGGATCCCTTCTGGGATTCGACAACTGCAACGTATAGGTGTTGGGCTAATACTTTCAATA
GTATCTATGGCAGTGTCTGCAGTTGTAGAAAGTCGCCGGAAATCAGTTGCCATTGAGCAT
AACATGGTTGACTCAGCCAATCAATTACCTATGAGTGTGTTCTGGCTTGGATTTCAATTT
GTAATATTTGCAACAGCTGAAATACTTACATTGGTAGGGCTGTTGGATTTCTTCTATGCA
GAGAGCACATCAGGCATGAAATCACTGAGTATGGCCATTACTTGGTGTTCACTGGCATTC
GGGTACTTCACAAGCTCAGTAGTGGTGAGTGTAATTAACAAGGTGAGTGGTGGCTGGTTA
GCTAATAACAACTTGAACAGAGACAAGCTCGACTACTTCTACTGGTTGCTCGCAGCAGTC
AGTGTGCTGAACTTTGGCTTCTACTTACTCTGTGCTTCTTGGTACAAGTATAAGAAGCCA
GAACTGAACCAAGAAGGTCCTATCTCTGATGAGAAGCCTAAGGGAAAAACTGAAATGCGT
GTTGTTTAG