Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030515
CDS Infomation

pacid=37475083 polypeptide=PGSC0003DMP400020714 locus=PGSC0003DMG400011686 ID=PGSC0003DMT400030515.v4.03 annot-version=v4.03
Sequence

ATGGATCTTCACGAGTCAATCACCAGCCAGACGGATATTTCTTTCATGCTTGCTAAGCAT
GTTTTCTCCAACGTAGTTAAAGGCGATACCAACCTGGTGCTTTCTCCTCTCTCAATTCAA
ATTGTTCTTGGCCTTATTGCTGCTGGCTCTGATGGACCTACTCAGGATCAGCTTCTCTGT
TTCCTCAAGTCCAAATCCATTGATGAGCTCAACTCTCTTTATTCACATATTACCAATGTA
GTCTTTCGTGATGGCAGCCCCAATGGAGGTTTGCGATTGTCCGTTGCTAATGGCATTTGG
ATCGATCAAACGCTGCCTTTAAAACCGTCTTTCAAGCAGGTCGTGGATAATGTTTACAAG
GCGGCTTCAGAGTATGTTGATTTTCAAAACAAGGCTGCTGAGGTTGTCGATCAAGTCAAC
CAGTGGACTAAAATGAAGACAAATGGTCTCATCGAACACATTCTTGATCGTGATGCAGTG
GACAACATGACAAGGCTGATCTTGGCCAATGCACTATATTTCAAAGGTGAATGGAATGAG
AAGTTCGATGCTTCAGAAACAAATGACCACGAGTTCCATCTCCTCGATGGGTTGCCTATT
CGAGTACCCTTCATGAGTAGCAAGAAAAAGCAGTACATAGCAGCATTTAATGGCTTTAAA
GTATTGAGGCTTCCTTATAAACAGGGAACAGATACGCGTTGCTTCTCAATGTACTTCATT
CTTCCAGATGCACATGATGGATTACCCGCTTTATTTGGCAAAATCAGTACAGAACCTGGA
TTCTTAAATCACCACGTTCCGTTAAGAAAAGTTAGTGTGGGCAAGTTTCTTATCCCTAAA
TTCAAAATAACTTTCAAGTTTGAAGCTTCCGACATTCTAAAGGGACTTGGCCTAACGTTA
CCTTTCTGCGGTGGTGGTCTCACTGAGATGGTTGATTCTACTTTACCTGAGAATCTATCT
GTTTCAAAAGTTTTTCACAAGTCCTTCATTGAGGTAAATGAGGAAGGCACCGAAGCTGCA
GCTGTTACGGTTACTCTAATAATGCCATTGTCCTTGTTTATTGAGAAGGAAATCGACTTT
GTTGCTGATCATTCATTCCTGTTCCTTATAAAAGATGAATCTACTGGTGTCGTATTGTTC
CTTGGGACTGTAATGAATCCTCTAGCTGGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400020714
PEP Infomation

pacid=37475083 transcript=PGSC0003DMT400030515 locus=PGSC0003DMG400011686 ID=PGSC0003DMT400030515.v4.03 annot-version=v4.03
Sequence

MDLHESITSQTDISFMLAKHVFSNVVKGDTNLVLSPLSIQIVLGLIAAGSDGPTQDQLLC
FLKSKSIDELNSLYSHITNVVFRDGSPNGGLRLSVANGIWIDQTLPLKPSFKQVVDNVYK
AASEYVDFQNKAAEVVDQVNQWTKMKTNGLIEHILDRDAVDNMTRLILANALYFKGEWNE
KFDASETNDHEFHLLDGLPIRVPFMSSKKKQYIAAFNGFKVLRLPYKQGTDTRCFSMYFI
LPDAHDGLPALFGKISTEPGFLNHHVPLRKVSVGKFLIPKFKITFKFEASDILKGLGLTL
PFCGGGLTEMVDSTLPENLSVSKVFHKSFIEVNEEGTEAAAVTVTLIMPLSLFIEKEIDF
VADHSFLFLIKDESTGVVLFLGTVMNPLAG*

Transcript Sequence

Transcript ID

PGSC0003DMT400030515
Transcript Infomation

pacid=37475083 locus=PGSC0003DMG400011686 ID=PGSC0003DMT400030515.v4.03 annot-version=v4.03
Sequence

ATGGATCTTCACGAGTCAATCACCAGCCAGACGGATATTTCTTTCATGCTTGCTAAGCAT
GTTTTCTCCAACGTAGTTAAAGGCGATACCAACCTGGTGCTTTCTCCTCTCTCAATTCAA
ATTGTTCTTGGCCTTATTGCTGCTGGCTCTGATGGACCTACTCAGGATCAGCTTCTCTGT
TTCCTCAAGTCCAAATCCATTGATGAGCTCAACTCTCTTTATTCACATATTACCAATGTA
GTCTTTCGTGATGGCAGCCCCAATGGAGGTTTGCGATTGTCCGTTGCTAATGGCATTTGG
ATCGATCAAACGCTGCCTTTAAAACCGTCTTTCAAGCAGGTCGTGGATAATGTTTACAAG
GCGGCTTCAGAGTATGTTGATTTTCAAAACAAGGCTGCTGAGGTTGTCGATCAAGTCAAC
CAGTGGACTAAAATGAAGACAAATGGTCTCATCGAACACATTCTTGATCGTGATGCAGTG
GACAACATGACAAGGCTGATCTTGGCCAATGCACTATATTTCAAAGGTGAATGGAATGAG
AAGTTCGATGCTTCAGAAACAAATGACCACGAGTTCCATCTCCTCGATGGGTTGCCTATT
CGAGTACCCTTCATGAGTAGCAAGAAAAAGCAGTACATAGCAGCATTTAATGGCTTTAAA
GTATTGAGGCTTCCTTATAAACAGGGAACAGATACGCGTTGCTTCTCAATGTACTTCATT
CTTCCAGATGCACATGATGGATTACCCGCTTTATTTGGCAAAATCAGTACAGAACCTGGA
TTCTTAAATCACCACGTTCCGTTAAGAAAAGTTAGTGTGGGCAAGTTTCTTATCCCTAAA
TTCAAAATAACTTTCAAGTTTGAAGCTTCCGACATTCTAAAGGGACTTGGCCTAACGTTA
CCTTTCTGCGGTGGTGGTCTCACTGAGATGGTTGATTCTACTTTACCTGAGAATCTATCT
GTTTCAAAAGTTTTTCACAAGTCCTTCATTGAGGTAAATGAGGAAGGCACCGAAGCTGCA
GCTGTTACGGTTACTCTAATAATGCCATTGTCCTTGTTTATTGAGAAGGAAATCGACTTT
GTTGCTGATCATTCATTCCTGTTCCTTATAAAAGATGAATCTACTGGTGTCGTATTGTTC
CTTGGGACTGTAATGAATCCTCTAGCTGGTTAG