Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030490
CDS Infomation

pacid=37474707 polypeptide=PGSC0003DMP400020698 locus=PGSC0003DMG401011679 ID=PGSC0003DMT400030490.v4.03 annot-version=v4.03
Sequence

ATGGATGCAATTTTGAATCTTCAAGCTGTACCATTAGGAACTGCTCTTACTGTAGGTGGT
CCAGTTGTTGCTCTTGGTGGGATTTCATTTTGGTTACTTAAGGAATATGTTAATGATCAA
AAAAGGAAATCTTCAAATTTTCTCCCACCTGTTCCAGAGGTTCCAGGGTTACCAGTGATT
GGGAATTTGCTGCAGATGACTGAGAAAAAACCACACAAGACATTTACAAATTGGGCTGAA
ACTTATGGACCTATTTATTCCATCAAAACCGGCGCAAATACAATTGTTGTACTCAGTTCT
AGTGAACTTGCTAAGGAGACTATGGTGACTAGATTTTCATCCATCTCAACTAGAAAGCTA
ACAAACGCATTGAGAATCCTTACTTGTGATAAGAGTATAGTTGCAATAAGTGATTACGAT
GAGTTTCACAAGACAGCAAAGCGCCATGTACTGACCAGTGTTCTAGGACCAACTGCTCAG
AGGCGCTTCCGTATCCACAGGGACACCTTGGTAGAAAATGTGTCAAAGCAACTACATGAT
TTGGTTAGGACTGATCCTAACGAAGCAGTTAATCTCAGGAAGTCATTTCAGTCAGAACTT
TTTGGTTTAGCATTGAAACAAACTTTGGGAAAGGATATAGAGGCTATTTATGTGGAGGGA
CTCGATGCCACTTTGCCAAGAGAGGAATTACTCAATATCTTAGTGCTTGATATAATGGAT
GGTGCAATTGATGTGGATTGGAGAGATTTCTTCCCCTATCTAAAATGGGTTCCTAACAAA
AGCTTTGAGCACAGAATTCAGCGTAAACATCTGCGCAGGGAAGCCGTGATGAAGGCCCTA
ATAGCAGATCAAAGGAAACGTATTAATTCGGGAGAGGAACTGAACAGTTATATCGACTAC
TTGTTATCTGAAGCCAATACGTTAACAGAGAAGCAAACTCTGATGTTGCTTTGGGAGGCA
ATTATTGAAACATCAGACACCACACTAGTGAGTACAGAATGGGCAATGTATGAATTGGCG
AAAGATCCCAAACGACAGGAACAACTCTTTTTGGAAATTCAAAATGTTTGTGGATCTAAC
AAGATCACAGAAGAGAAACTTTGCCAACTTCCATACTTATGTGCTGTCTTTCATGAAACA
TTGAGGAAGTATAGTCCTGTGCCTATTGTTCCTCTAAGATATGTCCACGAAGACACGCAG
GTAGGAGGGTACTATATTCCTAAAGGAACTGAGATCGCTATAAATATATACGGTTGCAAT
AGGGACAAGGACGTGTGGGAGTGTCCTGAAGAGTGGAAGCCTGAACGATTTCTTAACGGA
AAGTATGATCCAATGGAATTGCAGAAGACAATGGCGTTCGGGGCTGGAAAAAGGGTATGT
GCTGGTGCTCAGCAAGCAATGACAATTAGCTGCACAGCTATAGCTAGATTGATACAAGAG
TTTAAATGGAGCTTAAAAGAGGGAGAAGAGGAAAATGTTGCAACAATGGGTCTTACTACT
CATAAACTTCACCCAATGCTAGCTCATATCAAGCCAAGAAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400020698
PEP Infomation

pacid=37474707 transcript=PGSC0003DMT400030490 locus=PGSC0003DMG401011679 ID=PGSC0003DMT400030490.v4.03 annot-version=v4.03
Sequence

MDAILNLQAVPLGTALTVGGPVVALGGISFWLLKEYVNDQKRKSSNFLPPVPEVPGLPVI
GNLLQMTEKKPHKTFTNWAETYGPIYSIKTGANTIVVLSSSELAKETMVTRFSSISTRKL
TNALRILTCDKSIVAISDYDEFHKTAKRHVLTSVLGPTAQRRFRIHRDTLVENVSKQLHD
LVRTDPNEAVNLRKSFQSELFGLALKQTLGKDIEAIYVEGLDATLPREELLNILVLDIMD
GAIDVDWRDFFPYLKWVPNKSFEHRIQRKHLRREAVMKALIADQRKRINSGEELNSYIDY
LLSEANTLTEKQTLMLLWEAIIETSDTTLVSTEWAMYELAKDPKRQEQLFLEIQNVCGSN
KITEEKLCQLPYLCAVFHETLRKYSPVPIVPLRYVHEDTQVGGYYIPKGTEIAINIYGCN
RDKDVWECPEEWKPERFLNGKYDPMELQKTMAFGAGKRVCAGAQQAMTISCTAIARLIQE
FKWSLKEGEEENVATMGLTTHKLHPMLAHIKPRN*

Transcript Sequence

Transcript ID

PGSC0003DMT400030490
Transcript Infomation

pacid=37474707 locus=PGSC0003DMG401011679 ID=PGSC0003DMT400030490.v4.03 annot-version=v4.03
Sequence

ATGGATGCAATTTTGAATCTTCAAGCTGTACCATTAGGAACTGCTCTTACTGTAGGTGGT
CCAGTTGTTGCTCTTGGTGGGATTTCATTTTGGTTACTTAAGGAATATGTTAATGATCAA
AAAAGGAAATCTTCAAATTTTCTCCCACCTGTTCCAGAGGTTCCAGGGTTACCAGTGATT
GGGAATTTGCTGCAGATGACTGAGAAAAAACCACACAAGACATTTACAAATTGGGCTGAA
ACTTATGGACCTATTTATTCCATCAAAACCGGCGCAAATACAATTGTTGTACTCAGTTCT
AGTGAACTTGCTAAGGAGACTATGGTGACTAGATTTTCATCCATCTCAACTAGAAAGCTA
ACAAACGCATTGAGAATCCTTACTTGTGATAAGAGTATAGTTGCAATAAGTGATTACGAT
GAGTTTCACAAGACAGCAAAGCGCCATGTACTGACCAGTGTTCTAGGACCAACTGCTCAG
AGGCGCTTCCGTATCCACAGGGACACCTTGGTAGAAAATGTGTCAAAGCAACTACATGAT
TTGGTTAGGACTGATCCTAACGAAGCAGTTAATCTCAGGAAGTCATTTCAGTCAGAACTT
TTTGGTTTAGCATTGAAACAAACTTTGGGAAAGGATATAGAGGCTATTTATGTGGAGGGA
CTCGATGCCACTTTGCCAAGAGAGGAATTACTCAATATCTTAGTGCTTGATATAATGGAT
GGTGCAATTGATGTGGATTGGAGAGATTTCTTCCCCTATCTAAAATGGGTTCCTAACAAA
AGCTTTGAGCACAGAATTCAGCGTAAACATCTGCGCAGGGAAGCCGTGATGAAGGCCCTA
ATAGCAGATCAAAGGAAACGTATTAATTCGGGAGAGGAACTGAACAGTTATATCGACTAC
TTGTTATCTGAAGCCAATACGTTAACAGAGAAGCAAACTCTGATGTTGCTTTGGGAGGCA
ATTATTGAAACATCAGACACCACACTAGTGAGTACAGAATGGGCAATGTATGAATTGGCG
AAAGATCCCAAACGACAGGAACAACTCTTTTTGGAAATTCAAAATGTTTGTGGATCTAAC
AAGATCACAGAAGAGAAACTTTGCCAACTTCCATACTTATGTGCTGTCTTTCATGAAACA
TTGAGGAAGTATAGTCCTGTGCCTATTGTTCCTCTAAGATATGTCCACGAAGACACGCAG
GTAGGAGGGTACTATATTCCTAAAGGAACTGAGATCGCTATAAATATATACGGTTGCAAT
AGGGACAAGGACGTGTGGGAGTGTCCTGAAGAGTGGAAGCCTGAACGATTTCTTAACGGA
AAGTATGATCCAATGGAATTGCAGAAGACAATGGCGTTCGGGGCTGGAAAAAGGGTATGT
GCTGGTGCTCAGCAAGCAATGACAATTAGCTGCACAGCTATAGCTAGATTGATACAAGAG
TTTAAATGGAGCTTAAAAGAGGGAGAAGAGGAAAATGTTGCAACAATGGGTCTTACTACT
CATAAACTTCACCCAATGCTAGCTCATATCAAGCCAAGAAATTGA