Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030473
CDS Infomation

pacid=37431717 polypeptide=PGSC0003DMP400020691 locus=PGSC0003DMG400011670 ID=PGSC0003DMT400030473.v4.03 annot-version=v4.03
Sequence

ATGGGTCATCGACGATTTCTGAGAAGAAATCACAGATTTAGATTAAGCCGAGTACGCTTT
AATGGAAGCACAGAGGAGAGGAATCCACCATTAAAATTATCAGGTTCTAACATTTTGAGA
CAAATTGCTGAAGGGAGAGGAGTAGAGTTGAATGGTAGAAGGAAAAGATCTAGACGAGCA
ACTAAACAATGGAACAAGAGAAGTATATTCTTTGAACTTCCATATTGGGAGTCCAACTTA
TTGCGTCATAATCTAGATTTTATGCATATTGAAAAAAATATATGTGACAATATCATATAT
ACGTTGCTGGATGATAAATCAAAGTCAAAAGATAATGCTAATGCTCGCAAAGATCTAAGA
GAAATGAGAATAAGGCCTGATCTTTGGCTGAAGGATGATGGATCGTATAACCTAGTTGTG
TTTTCACTTATGACTGATAACAAAAAGGTGGACACTAAAAAGTTGTTTCTTACAACTTTG
AAGAATATTAAAGTACCAGATGGCTACTCAAGTAACATTTCCAGATGCGTTGATCTTGCA
CAGAAAAAAAATTATGGGTTGAAAAGTCATGATAGTCATGTTCTTTTAGAGCAGTTACTA
CCATTGGCAATTCGCAATGTGTTGCCAAATCACGTAGTTACAGTTTTGGTGGAATTTTCC
TCATTTTTCAGAGCCCTATCTAGCAAAACTTTGAATCCTTCGGAGCTTGATATTCTCCAG
GAGCGCTTTATAATCACACTTTGTCACCTAGAGATGCTATTTCCTCCATCATTCTTTACT
GTAATGGTTCATTTATCAGTTCATCTAGTAGATGAAGCAAAACTCGGAGGTCCAGTGCAT
TATCGAAACATGTATCCTGTGGAGAGGGAATTAGGTTATTGTAAGCCCTATGTACGAAAT
AAATCACAACCAGAGGGTTGTATAGCTGAGGGTCATATAGCTGAAAAGACTCTTACCTTT
TGTTCTTGGTATATTGAGGATATTGAGACAAGGTTCAACAGACCTAGGCGTGTCCGTGAT
GAACCAACTGATATGCCTTCTGGAATGTCATCTCTCTTCCCTCAATTGGGTAAACCTGCA
TCAGCTTCAGAAAACTTCCCTTTAAATCCTATGCAGAAACTACAAGCTCATCGATATGTT
CTTCTGAATTGTGCAATAGTCACGCCATTTGTGGAAGAATACATAATGAGGAGTTCAAGG
GAAAGAAGACCTTCACCTACAGAGATAGAGAGGAGAGTTAATAAAGAGTTTGTTGATTGG
TTTCAAAAGCAGATTATGAATCAAGACACAATAGATACAATGTCTATCGATCTAAAGTTT
TTAGCACGAGGTCCATCTGTAAATGCAAGAAGATTTACTGCATATAACATCAATGGGTCC
AAATTTCGAACTTTGGCTCGAGAAGAAGGTTTGAAAACACAGAATAGTGGAGTTTTCTTA
ACCTCCAAAACATCATGTGTTGCAAGCAGTGTTGATGGAAATTTAAGGCAAGCAGAGTTA
CCATATTATGGGAAGTTAGAAGATATTATTGAGATTAATTACAATGGACGGTTTAAGGTT
GTTCTTTTCAAATGTAAATGGGCTGATACGACTCGAGATAGAGGGTATCAAAAGGATCGT
TGGAATTTTAATTGTGTTAATTTTTATAGATTGATTCATATTGGTGAACGTGAAGAACAT
GAGCCTTACATCGAAGCATCTCAAGCACAAACAGTGTACTATGTGGATGATATTGTCAAT
AAAGGGTGGAGTGTTGCTGTGCATCTAAAACCAAGAGATTTATATGATATGGGAGAAGTA
ATGGAAGAACAAGTATATGAGAATGAACCATACCAAGAGCAAGAACTCGACCAATTTTTC
ACTGATGGTGATGAGTATGTTCAGCTAGCTACAGATTATATAATTGATGATACAGTAGAG
GCAAATTTTGCTACTAACCTAGCAACAGATGCAATGTCTGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400020691
PEP Infomation

pacid=37431717 transcript=PGSC0003DMT400030473 locus=PGSC0003DMG400011670 ID=PGSC0003DMT400030473.v4.03 annot-version=v4.03
Sequence

MGHRRFLRRNHRFRLSRVRFNGSTEERNPPLKLSGSNILRQIAEGRGVELNGRRKRSRRA
TKQWNKRSIFFELPYWESNLLRHNLDFMHIEKNICDNIIYTLLDDKSKSKDNANARKDLR
EMRIRPDLWLKDDGSYNLVVFSLMTDNKKVDTKKLFLTTLKNIKVPDGYSSNISRCVDLA
QKKNYGLKSHDSHVLLEQLLPLAIRNVLPNHVVTVLVEFSSFFRALSSKTLNPSELDILQ
ERFIITLCHLEMLFPPSFFTVMVHLSVHLVDEAKLGGPVHYRNMYPVERELGYCKPYVRN
KSQPEGCIAEGHIAEKTLTFCSWYIEDIETRFNRPRRVRDEPTDMPSGMSSLFPQLGKPA
SASENFPLNPMQKLQAHRYVLLNCAIVTPFVEEYIMRSSRERRPSPTEIERRVNKEFVDW
FQKQIMNQDTIDTMSIDLKFLARGPSVNARRFTAYNINGSKFRTLAREEGLKTQNSGVFL
TSKTSCVASSVDGNLRQAELPYYGKLEDIIEINYNGRFKVVLFKCKWADTTRDRGYQKDR
WNFNCVNFYRLIHIGEREEHEPYIEASQAQTVYYVDDIVNKGWSVAVHLKPRDLYDMGEV
MEEQVYENEPYQEQELDQFFTDGDEYVQLATDYIIDDTVEANFATNLATDAMSE*

Transcript Sequence

Transcript ID

PGSC0003DMT400030473
Transcript Infomation

pacid=37431717 locus=PGSC0003DMG400011670 ID=PGSC0003DMT400030473.v4.03 annot-version=v4.03
Sequence

ATGGGTCATCGACGATTTCTGAGAAGAAATCACAGATTTAGATTAAGCCGAGTACGCTTT
AATGGAAGCACAGAGGAGAGGAATCCACCATTAAAATTATCAGGTTCTAACATTTTGAGA
CAAATTGCTGAAGGGAGAGGAGTAGAGTTGAATGGTAGAAGGAAAAGATCTAGACGAGCA
ACTAAACAATGGAACAAGAGAAGTATATTCTTTGAACTTCCATATTGGGAGTCCAACTTA
TTGCGTCATAATCTAGATTTTATGCATATTGAAAAAAATATATGTGACAATATCATATAT
ACGTTGCTGGATGATAAATCAAAGTCAAAAGATAATGCTAATGCTCGCAAAGATCTAAGA
GAAATGAGAATAAGGCCTGATCTTTGGCTGAAGGATGATGGATCGTATAACCTAGTTGTG
TTTTCACTTATGACTGATAACAAAAAGGTGGACACTAAAAAGTTGTTTCTTACAACTTTG
AAGAATATTAAAGTACCAGATGGCTACTCAAGTAACATTTCCAGATGCGTTGATCTTGCA
CAGAAAAAAAATTATGGGTTGAAAAGTCATGATAGTCATGTTCTTTTAGAGCAGTTACTA
CCATTGGCAATTCGCAATGTGTTGCCAAATCACGTAGTTACAGTTTTGGTGGAATTTTCC
TCATTTTTCAGAGCCCTATCTAGCAAAACTTTGAATCCTTCGGAGCTTGATATTCTCCAG
GAGCGCTTTATAATCACACTTTGTCACCTAGAGATGCTATTTCCTCCATCATTCTTTACT
GTAATGGTTCATTTATCAGTTCATCTAGTAGATGAAGCAAAACTCGGAGGTCCAGTGCAT
TATCGAAACATGTATCCTGTGGAGAGGGAATTAGGTTATTGTAAGCCCTATGTACGAAAT
AAATCACAACCAGAGGGTTGTATAGCTGAGGGTCATATAGCTGAAAAGACTCTTACCTTT
TGTTCTTGGTATATTGAGGATATTGAGACAAGGTTCAACAGACCTAGGCGTGTCCGTGAT
GAACCAACTGATATGCCTTCTGGAATGTCATCTCTCTTCCCTCAATTGGGTAAACCTGCA
TCAGCTTCAGAAAACTTCCCTTTAAATCCTATGCAGAAACTACAAGCTCATCGATATGTT
CTTCTGAATTGTGCAATAGTCACGCCATTTGTGGAAGAATACATAATGAGGAGTTCAAGG
GAAAGAAGACCTTCACCTACAGAGATAGAGAGGAGAGTTAATAAAGAGTTTGTTGATTGG
TTTCAAAAGCAGATTATGAATCAAGACACAATAGATACAATGTCTATCGATCTAAAGTTT
TTAGCACGAGGTCCATCTGTAAATGCAAGAAGATTTACTGCATATAACATCAATGGGTCC
AAATTTCGAACTTTGGCTCGAGAAGAAGGTTTGAAAACACAGAATAGTGGAGTTTTCTTA
ACCTCCAAAACATCATGTGTTGCAAGCAGTGTTGATGGAAATTTAAGGCAAGCAGAGTTA
CCATATTATGGGAAGTTAGAAGATATTATTGAGATTAATTACAATGGACGGTTTAAGGTT
GTTCTTTTCAAATGTAAATGGGCTGATACGACTCGAGATAGAGGGTATCAAAAGGATCGT
TGGAATTTTAATTGTGTTAATTTTTATAGATTGATTCATATTGGTGAACGTGAAGAACAT
GAGCCTTACATCGAAGCATCTCAAGCACAAACAGTGTACTATGTGGATGATATTGTCAAT
AAAGGGTGGAGTGTTGCTGTGCATCTAAAACCAAGAGATTTATATGATATGGGAGAAGTA
ATGGAAGAACAAGTATATGAGAATGAACCATACCAAGAGCAAGAACTCGACCAATTTTTC
ACTGATGGTGATGAGTATGTTCAGCTAGCTACAGATTATATAATTGATGATACAGTAGAG
GCAAATTTTGCTACTAACCTAGCAACAGATGCAATGTCTGAATGA