Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030465
CDS Infomation

pacid=37431646 polypeptide=PGSC0003DMP400020684 locus=PGSC0003DMG400011668 ID=PGSC0003DMT400030465.v4.03 annot-version=v4.03
Sequence

ATGATGAAATATAGACTTGTAATTTCCTTGTTCCTTCGTGGTCATCTCACTCCCAATTTG
CCATCTTTTCTTCTTCGATCCACCAGTGGTGTTTTCGTTCCCCATGCTAGTTTCCTACAT
GGTGCTCTCTCAAGGTCTACTTCTGGAATCAGGTTCTCTACTTTTACTTCCTCAAGCAAT
TCACATGATGGCAGTGATTATGAACATGAAGATACTACTGATACTGACCCTTCACTAGAT
TATAACGAACTATATTCTGATTTTTCCAAAGAAGATGTTGAAACAATTGAAGCCATTTTC
AAACAACCCGGAACCCATGTGCATAACAAACTTGAGCAATGTGGTGTAAGGCCCACACGC
AATCTAGTTACTGTCATTCTTTCTCGTGCACGAAATAATTGGGAAGTTGCATTCACTTTC
TTCATATGGGCCAGTAAACAAACAGGTTATGTGCACTCTGTGCGTCAATACCATTCTATG
ATATCTATACTTGGAAAAATGAGGAAGTTTGACACTGCATGGTCACTCATTGAGGAAATG
AGAGGTGGTAAAGATAGACCATCTCTTGTGAATCCTCAGACACTCTTGATCATGATAAGG
AAATACTGTGCTGTACATGACGTCGGAAAATCTATCAGTACTTTTTATGCATTTAAACGG
TTTAATTTAGATATTGGAATGGAAGAATTTCAAGACCTTTTGTCTGCCCTTGCTCGCTAC
AAAAATGTAAAAGATGCCGAGCACTTGCTTTTTTGCAATAAGAATGTTTTCCCGTTGAAT
ACCAAGAGTTTGAATATCATTCTCAATGGATGGTGTCTTGCCCTTGATGATTTAAGTGAG
GGAAAGAGGATTTGGAGGTTGATGAAGGAAAAAAGGATTCCTCGTGATATTTTTTCGTAT
TGTAGTATCATGTCTTGCTATTCGAGGGCTGGTAGACTCAATGTTGTGCTTAAGCTTTTC
GATGAGATGAAATTGTGTGGGGTTGCACCTGATGTTAAGGTTTATAATGCTGTCATTCAT
GCTCTTGCAAAAGGCAGGTTGGTTAAACAAGCTAGGAGTGTGATGAAGATGATGGAAGAG
AATGATCTCGCTCCAAACGCTGTTACTTATAACTCATTAATCATGCCTCTCTGCAAAGCT
CAATTACTAGATGAAGCTCAAGAGATCTTCAATGAAATGATTCAACGAGGCATACATCCT
ACTGTCCGAACTTACCATGCATTGCTTCGTAGCCTGAGGACAGGGGAAGAGGTGTTCGAG
CACTTGCAGAAGATGAACACGATGGGATGTATTCCAACTCATGACACTTATATAATGTTA
ATCCGGAAGTTTTGCCGATGGTGCCAACTTGATAATGTTTTCATGTTGTGGGATAAGATG
AGCAAGATCGGCTTGGACCATGATCGAAGTTCATATATAGTGCTGATACATGGACTCTTT
TTGAATGGGAAGCTGGAGCAGTCGTACAAATACTATCAAGAAATGAAGCAAAAAGGTTTA
CTGCCGGAGCCCAAGATAGATGAAATGCTTCAAGCTTGGGTGGCTGGCAGGAGAGATTCT
CAAGAGAATAAAGTAACATGTCATCAGGAGAACAAAAAGGTGGTCAAATTTGAAAAAGCT
GATAAAGAAAGGGATTTCCATAAAAAACCTGAAATGAGAAAAGTTATGAGAGAGCGTGGC
TTTTCTTTCTGGGATCAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400020684
PEP Infomation

pacid=37431646 transcript=PGSC0003DMT400030465 locus=PGSC0003DMG400011668 ID=PGSC0003DMT400030465.v4.03 annot-version=v4.03
Sequence

MMKYRLVISLFLRGHLTPNLPSFLLRSTSGVFVPHASFLHGALSRSTSGIRFSTFTSSSN
SHDGSDYEHEDTTDTDPSLDYNELYSDFSKEDVETIEAIFKQPGTHVHNKLEQCGVRPTR
NLVTVILSRARNNWEVAFTFFIWASKQTGYVHSVRQYHSMISILGKMRKFDTAWSLIEEM
RGGKDRPSLVNPQTLLIMIRKYCAVHDVGKSISTFYAFKRFNLDIGMEEFQDLLSALARY
KNVKDAEHLLFCNKNVFPLNTKSLNIILNGWCLALDDLSEGKRIWRLMKEKRIPRDIFSY
CSIMSCYSRAGRLNVVLKLFDEMKLCGVAPDVKVYNAVIHALAKGRLVKQARSVMKMMEE
NDLAPNAVTYNSLIMPLCKAQLLDEAQEIFNEMIQRGIHPTVRTYHALLRSLRTGEEVFE
HLQKMNTMGCIPTHDTYIMLIRKFCRWCQLDNVFMLWDKMSKIGLDHDRSSYIVLIHGLF
LNGKLEQSYKYYQEMKQKGLLPEPKIDEMLQAWVAGRRDSQENKVTCHQENKKVVKFEKA
DKERDFHKKPEMRKVMRERGFSFWDQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400030465
Transcript Infomation

pacid=37431646 locus=PGSC0003DMG400011668 ID=PGSC0003DMT400030465.v4.03 annot-version=v4.03
Sequence

ATGATGAAATATAGACTTGTAATTTCCTTGTTCCTTCGTGGTCATCTCACTCCCAATTTG
CCATCTTTTCTTCTTCGATCCACCAGTGGTGTTTTCGTTCCCCATGCTAGTTTCCTACAT
GGTGCTCTCTCAAGGTCTACTTCTGGAATCAGGTTCTCTACTTTTACTTCCTCAAGCAAT
TCACATGATGGCAGTGATTATGAACATGAAGATACTACTGATACTGACCCTTCACTAGAT
TATAACGAACTATATTCTGATTTTTCCAAAGAAGATGTTGAAACAATTGAAGCCATTTTC
AAACAACCCGGAACCCATGTGCATAACAAACTTGAGCAATGTGGTGTAAGGCCCACACGC
AATCTAGTTACTGTCATTCTTTCTCGTGCACGAAATAATTGGGAAGTTGCATTCACTTTC
TTCATATGGGCCAGTAAACAAACAGGTTATGTGCACTCTGTGCGTCAATACCATTCTATG
ATATCTATACTTGGAAAAATGAGGAAGTTTGACACTGCATGGTCACTCATTGAGGAAATG
AGAGGTGGTAAAGATAGACCATCTCTTGTGAATCCTCAGACACTCTTGATCATGATAAGG
AAATACTGTGCTGTACATGACGTCGGAAAATCTATCAGTACTTTTTATGCATTTAAACGG
TTTAATTTAGATATTGGAATGGAAGAATTTCAAGACCTTTTGTCTGCCCTTGCTCGCTAC
AAAAATGTAAAAGATGCCGAGCACTTGCTTTTTTGCAATAAGAATGTTTTCCCGTTGAAT
ACCAAGAGTTTGAATATCATTCTCAATGGATGGTGTCTTGCCCTTGATGATTTAAGTGAG
GGAAAGAGGATTTGGAGGTTGATGAAGGAAAAAAGGATTCCTCGTGATATTTTTTCGTAT
TGTAGTATCATGTCTTGCTATTCGAGGGCTGGTAGACTCAATGTTGTGCTTAAGCTTTTC
GATGAGATGAAATTGTGTGGGGTTGCACCTGATGTTAAGGTTTATAATGCTGTCATTCAT
GCTCTTGCAAAAGGCAGGTTGGTTAAACAAGCTAGGAGTGTGATGAAGATGATGGAAGAG
AATGATCTCGCTCCAAACGCTGTTACTTATAACTCATTAATCATGCCTCTCTGCAAAGCT
CAATTACTAGATGAAGCTCAAGAGATCTTCAATGAAATGATTCAACGAGGCATACATCCT
ACTGTCCGAACTTACCATGCATTGCTTCGTAGCCTGAGGACAGGGGAAGAGGTGTTCGAG
CACTTGCAGAAGATGAACACGATGGGATGTATTCCAACTCATGACACTTATATAATGTTA
ATCCGGAAGTTTTGCCGATGGTGCCAACTTGATAATGTTTTCATGTTGTGGGATAAGATG
AGCAAGATCGGCTTGGACCATGATCGAAGTTCATATATAGTGCTGATACATGGACTCTTT
TTGAATGGGAAGCTGGAGCAGTCGTACAAATACTATCAAGAAATGAAGCAAAAAGGTTTA
CTGCCGGAGCCCAAGATAGATGAAATGCTTCAAGCTTGGGTGGCTGGCAGGAGAGATTCT
CAAGAGAATAAAGTAACATGTCATCAGGAGAACAAAAAGGTGGTCAAATTTGAAAAAGCT
GATAAAGAAAGGGATTTCCATAAAAAACCTGAAATGAGAAAAGTTATGAGAGAGCGTGGC
TTTTCTTTCTGGGATCAATAG