Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030414
CDS Infomation

pacid=37445192 polypeptide=PGSC0003DMP400020650 locus=PGSC0003DMG400011646 ID=PGSC0003DMT400030414.v4.03 annot-version=v4.03
Sequence

ATGGCATCTCAGGCGATAAGAGAATGGGTTGGATTTCAGCAGTTTCCTTCAGCCACTCAA
TCGAAGTTAATTGAATTGATAAAGAAATTGAAGCAGGAGAGTGTAAGTACATTGACAATC
CTAGTAATGGGGAAAGGTGGTGTCGGAAAATCTTCAACTGTTAACTCAATTTTAGGGGAA
AGAGCAGTTGCTGTCAGTCCGTTTCAGTCAGAAACTCCAAGACCAGTGATGGTGTCACGT
TCATGGGCAGAATTTACATTGAACATTATCGACACCCCCGGGCTGGTTGAAGGAGGATAT
GTCAATGACCAGGCTCTTGATCTCATAAAGAGGTTCCTCCTGAACAAGACAATTGATGTT
TTGCTCTATGTGGATCGTCTTGATACATATAGAGTGGACAATTTGGATAGGCAGATTGTG
AAGGCCATAACAGATAGTTTTGGCAAGGAAATATGGCATAGAGGACTTGTGGTCCTCACA
CATGCTCAGGTCTCCCCTCCTGATGGATTGAGTTATGACGAGTTCACTTCAAGAAGATCA
GAGGCGCTTTCGAAAATTGTCCGCCTGGGAGCTCGAATTAGGAAACAAGAGGTTAAGGCT
TCTTCAGTTCCTATTGTTTGCGTTGAGAACAGTGGGAGATGTAACAAGAATGAACTTGAC
GAAAAGATTCTACCGAATGGAACTGCATGGATACCCAATTTACTCCAAACTATTACTGAA
GTTGTCGTAAGTGAAAGCAAGGGCATCTTGGTTGATAAAAAATTGATCGAAGGACCAAAT
CCCAACAACAAGGGCAAACTGCTGATTCCTCTTATCGCAGCATTCCAGTATTTCTTTGTT
GTGAAAAGGATCCAGAAGTGGATCAAGAACGATATTGCAAGAGAGAGCAGACCTTCATGG
GCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400020650
PEP Infomation

pacid=37445192 transcript=PGSC0003DMT400030414 locus=PGSC0003DMG400011646 ID=PGSC0003DMT400030414.v4.03 annot-version=v4.03
Sequence

MASQAIREWVGFQQFPSATQSKLIELIKKLKQESVSTLTILVMGKGGVGKSSTVNSILGE
RAVAVSPFQSETPRPVMVSRSWAEFTLNIIDTPGLVEGGYVNDQALDLIKRFLLNKTIDV
LLYVDRLDTYRVDNLDRQIVKAITDSFGKEIWHRGLVVLTHAQVSPPDGLSYDEFTSRRS
EALSKIVRLGARIRKQEVKASSVPIVCVENSGRCNKNELDEKILPNGTAWIPNLLQTITE
VVVSESKGILVDKKLIEGPNPNNKGKLLIPLIAAFQYFFVVKRIQKWIKNDIARESRPSW
A*

Transcript Sequence

Transcript ID

PGSC0003DMT400030414
Transcript Infomation

pacid=37445192 locus=PGSC0003DMG400011646 ID=PGSC0003DMT400030414.v4.03 annot-version=v4.03
Sequence

ATGGCATCTCAGGCGATAAGAGAATGGGTTGGATTTCAGCAGTTTCCTTCAGCCACTCAA
TCGAAGTTAATTGAATTGATAAAGAAATTGAAGCAGGAGAGTGTAAGTACATTGACAATC
CTAGTAATGGGGAAAGGTGGTGTCGGAAAATCTTCAACTGTTAACTCAATTTTAGGGGAA
AGAGCAGTTGCTGTCAGTCCGTTTCAGTCAGAAACTCCAAGACCAGTGATGGTGTCACGT
TCATGGGCAGAATTTACATTGAACATTATCGACACCCCCGGGCTGGTTGAAGGAGGATAT
GTCAATGACCAGGCTCTTGATCTCATAAAGAGGTTCCTCCTGAACAAGACAATTGATGTT
TTGCTCTATGTGGATCGTCTTGATACATATAGAGTGGACAATTTGGATAGGCAGATTGTG
AAGGCCATAACAGATAGTTTTGGCAAGGAAATATGGCATAGAGGACTTGTGGTCCTCACA
CATGCTCAGGTCTCCCCTCCTGATGGATTGAGTTATGACGAGTTCACTTCAAGAAGATCA
GAGGCGCTTTCGAAAATTGTCCGCCTGGGAGCTCGAATTAGGAAACAAGAGGTTAAGGCT
TCTTCAGTTCCTATTGTTTGCGTTGAGAACAGTGGGAGATGTAACAAGAATGAACTTGAC
GAAAAGATTCTACCGAATGGAACTGCATGGATACCCAATTTACTCCAAACTATTACTGAA
GTTGTCGTAAGTGAAAGCAAGGGCATCTTGGTTGATAAAAAATTGATCGAAGGACCAAAT
CCCAACAACAAGGGCAAACTGCTGATTCCTCTTATCGCAGCATTCCAGTATTTCTTTGTT
GTGAAAAGGATCCAGAAGTGGATCAAGAACGATATTGCAAGAGAGAGCAGACCTTCATGG
GCATAA