Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030402
CDS Infomation

pacid=37444850 polypeptide=PGSC0003DMP400020640 locus=PGSC0003DMG400011640 ID=PGSC0003DMT400030402.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCAAAAAATAATACTATGGTTTTTTTATTTTTGCTTGTGACCTTACTAATT
GGAAGTTCATCAGCACAACTTTCAACTAGTTTTTACTCAAAATCATGTCCTAAGCTTTAT
CAAACTGTGAAATCAACAGTGCAATCAGCTATCAAAAAAGAAACCCGAATGGGCGCTTCG
CTTCTTAGGCTTTTCTTCCATGATTGCTTCGTTAACGGATGTGATGGATCACTACTCCTT
GATGACACATCAAGCTTTACTGGAGAAAAAAGGGCTGCTCCAAATGTGAATTCTGTAAGA
GGATTTGAAGTCATTGACAACATCAAATCTGCTGTAGAAAAAGCATGCCCCGGCGTTGTT
TCTTGTGCTGATATTTTAGCTGTTACGGCTCGTGATTCTGTTGTCATTCTTGGAGGGCCT
AATTGGAATGTAAAATTGGGCAGAAGAGATGCCAGGACTGCAAGCCAAGGTGCTGCCAAC
AGCAGCATTCCAGCTCCTACTTTTAACCTAAATAGACTCATCTCAAGTTTTAGTGCTGTT
GGCCTTTCTACCAAGGATATGGTTGCCTTATCTGGTTCTCACACAATTGGACAAGCAAGA
TGCACAACATTTAGGGCACGTATATACAATGAGACCAACAGCATAGATTCATCATTTGCA
AGAACAAGGCAAAATAGTTGTCCAAGAAACTCAGGCTCAGGTGACAACAACTTAGCGCCT
CTAGATCTTCAAACACCTTCGAAATTCGATAACAATTACTTCAAGAATCTTGTGAATAAA
AAGGGTCTTCTACATTCCGATCAACAATTATTCAATGGGGGATCTGCTGATTCGATCGTT
AGGTCTTACATCAATAATCCTAGTAGTTTCAACTCTGATTTTGTGACTGCTATGATCAAG
ATGGGCGATATTCGTCCACTTACTGGATCGAATGGTGAAATTAGGAAGAACTGCCGTAGA
AGAAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400020640
PEP Infomation

pacid=37444850 transcript=PGSC0003DMT400030402 locus=PGSC0003DMG400011640 ID=PGSC0003DMT400030402.v4.03 annot-version=v4.03
Sequence

MASSKNNTMVFLFLLVTLLIGSSSAQLSTSFYSKSCPKLYQTVKSTVQSAIKKETRMGAS
LLRLFFHDCFVNGCDGSLLLDDTSSFTGEKRAAPNVNSVRGFEVIDNIKSAVEKACPGVV
SCADILAVTARDSVVILGGPNWNVKLGRRDARTASQGAANSSIPAPTFNLNRLISSFSAV
GLSTKDMVALSGSHTIGQARCTTFRARIYNETNSIDSSFARTRQNSCPRNSGSGDNNLAP
LDLQTPSKFDNNYFKNLVNKKGLLHSDQQLFNGGSADSIVRSYINNPSSFNSDFVTAMIK
MGDIRPLTGSNGEIRKNCRRRN*

Transcript Sequence

Transcript ID

PGSC0003DMT400030402
Transcript Infomation

pacid=37444850 locus=PGSC0003DMG400011640 ID=PGSC0003DMT400030402.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCAAAAAATAATACTATGGTTTTTTTATTTTTGCTTGTGACCTTACTAATT
GGAAGTTCATCAGCACAACTTTCAACTAGTTTTTACTCAAAATCATGTCCTAAGCTTTAT
CAAACTGTGAAATCAACAGTGCAATCAGCTATCAAAAAAGAAACCCGAATGGGCGCTTCG
CTTCTTAGGCTTTTCTTCCATGATTGCTTCGTTAACGGATGTGATGGATCACTACTCCTT
GATGACACATCAAGCTTTACTGGAGAAAAAAGGGCTGCTCCAAATGTGAATTCTGTAAGA
GGATTTGAAGTCATTGACAACATCAAATCTGCTGTAGAAAAAGCATGCCCCGGCGTTGTT
TCTTGTGCTGATATTTTAGCTGTTACGGCTCGTGATTCTGTTGTCATTCTTGGAGGGCCT
AATTGGAATGTAAAATTGGGCAGAAGAGATGCCAGGACTGCAAGCCAAGGTGCTGCCAAC
AGCAGCATTCCAGCTCCTACTTTTAACCTAAATAGACTCATCTCAAGTTTTAGTGCTGTT
GGCCTTTCTACCAAGGATATGGTTGCCTTATCTGGTTCTCACACAATTGGACAAGCAAGA
TGCACAACATTTAGGGCACGTATATACAATGAGACCAACAGCATAGATTCATCATTTGCA
AGAACAAGGCAAAATAGTTGTCCAAGAAACTCAGGCTCAGGTGACAACAACTTAGCGCCT
CTAGATCTTCAAACACCTTCGAAATTCGATAACAATTACTTCAAGAATCTTGTGAATAAA
AAGGGTCTTCTACATTCCGATCAACAATTATTCAATGGGGGATCTGCTGATTCGATCGTT
AGGTCTTACATCAATAATCCTAGTAGTTTCAACTCTGATTTTGTGACTGCTATGATCAAG
ATGGGCGATATTCGTCCACTTACTGGATCGAATGGTGAAATTAGGAAGAACTGCCGTAGA
AGAAATTAA