Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030376
CDS Infomation

pacid=37458113 polypeptide=PGSC0003DMP400020622 locus=PGSC0003DMG400011624 ID=PGSC0003DMT400030376.v4.03 annot-version=v4.03
Sequence

ATGGATCATAGTACGGGAAAACCGGGATTTTTTAGGAATGTTTTGGTACGTTTATGCCTT
TTTTGTGTTGTGATTGTCTGTTGTCGGTTTGCTTATGTGGTGACTCTCAAAGGGGAAACT
TGTGACCTCGGCGATTTTTGTTTCTTCTCTATACCGGAAAATCTCAATGTTATTTCCGGC
GTCGGACAGCTCGCTGGGTCTGTATCAGCGGTCATGACCACCGAGAATGCCGGAAAATCT
GCTCCGACGAAGCCCAAACTTCCCGATCTATGGGCGAACAAAGATTTCCAAAAGTCGGCC
CAATTTTATTCTTCGGTGTTTGAGGATCTTGTTGCGGATGGTTTTTTGAACCCAAATTCG
AAAACCCTTTGCGTTGAAACGCCGATGGGTGCTGATGTTTTTGCGTTGAGGGAAATTGGG
GTTGCCGATTCCGTTGGGCTTTACAAGAAAGGTTCAAAGCCTTTGGTGATTACAGGTAAA
GCTGTTAAGCAACCCTTTGAAGATGATACATTCGATTTCATATTTTCCGGTGCCGGAATG
ATAGATAAGTCACTTAAGCCGGGAGATTTTGCGGCGGAGATTTGCCGGACTCTAAAACCC
GAAGGGTTTTTGGTTGTCCATACAGGTTCTAATGATACATACAGTTTCAATTCATTCCTT
CATTTGTTTAATTGTTGTACATTGATTAAGTCTAGGAATATTGATGGTTTCGATTCGACT
ATTCGTGAGATTGTTATGAAAAAGGATGTATTTGTTGAAGAAAAAGTGAGTGATTCCAAG
AACAATTGTCGTCATGTTCCCGATTATAAAATGAAACTGATTAAAAAAGCTGAGCCTTTG
ATTAAAGAGGAACCTAAGAAACCATGGATTACACTTAAGAAGAATGCACAGAGCATTAAG
TACTTGTCGTCCATGGCGGATATTAGTTTTAAGCAGAGATATGTCTATGTTGATGTTGGT
TCGAGGAGTTATGGTTCAAGCATTGTGAGTTGGTTCAAGAAACAGTATCCTAAGCAAAAC
AAGACCTTTGAGATATATGCTGTTGAGGCTGACAAGACTTTCCATGGGCAGTATAAGGAG
AAGAAAGGGGTTACTTTGTTGCCATATGCAGCTTGGGTTAAGAATGAGACGTTGTCGTTT
GAGATTAATCAAGATCCGGGTCATAAAGATGTGGCAAAAGGAAGAGGGATGGGAAGAATT
CAACCTGTTGAATCTTCTAGTGAATCTGCAAGTGAGGTGGATGTAATCCAAGGTTTTGAC
TTTGCTGAATGGTTGATGAGCGCGGTATCAGAGAAGGATTATGTGGTGATGAAGATGGAT
GTTGAAGGGACTGAATTCGATTTGATCCCGAGATTGATTGAAACAGGAGCAATTTGCTTG
ATTGATGAAGTGTTTCTTGAATGCCATTACAATAGGTGGCAGAAATGCTGCCCTGGGGAG
AGGTCTTCAAAGTATCCGAATACGTATAGCCAGTGTTTGGATCTCTTCACTTCTCTAAGA
GAAAGTGGAGTTCTTGTTCATCAATGGTGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400020622
PEP Infomation

pacid=37458113 transcript=PGSC0003DMT400030376 locus=PGSC0003DMG400011624 ID=PGSC0003DMT400030376.v4.03 annot-version=v4.03
Sequence

MDHSTGKPGFFRNVLVRLCLFCVVIVCCRFAYVVTLKGETCDLGDFCFFSIPENLNVISG
VGQLAGSVSAVMTTENAGKSAPTKPKLPDLWANKDFQKSAQFYSSVFEDLVADGFLNPNS
KTLCVETPMGADVFALREIGVADSVGLYKKGSKPLVITGKAVKQPFEDDTFDFIFSGAGM
IDKSLKPGDFAAEICRTLKPEGFLVVHTGSNDTYSFNSFLHLFNCCTLIKSRNIDGFDST
IREIVMKKDVFVEEKVSDSKNNCRHVPDYKMKLIKKAEPLIKEEPKKPWITLKKNAQSIK
YLSSMADISFKQRYVYVDVGSRSYGSSIVSWFKKQYPKQNKTFEIYAVEADKTFHGQYKE
KKGVTLLPYAAWVKNETLSFEINQDPGHKDVAKGRGMGRIQPVESSSESASEVDVIQGFD
FAEWLMSAVSEKDYVVMKMDVEGTEFDLIPRLIETGAICLIDEVFLECHYNRWQKCCPGE
RSSKYPNTYSQCLDLFTSLRESGVLVHQWW*

Transcript Sequence

Transcript ID

PGSC0003DMT400030376
Transcript Infomation

pacid=37458113 locus=PGSC0003DMG400011624 ID=PGSC0003DMT400030376.v4.03 annot-version=v4.03
Sequence

ATGGATCATAGTACGGGAAAACCGGGATTTTTTAGGAATGTTTTGGTACGTTTATGCCTT
TTTTGTGTTGTGATTGTCTGTTGTCGGTTTGCTTATGTGGTGACTCTCAAAGGGGAAACT
TGTGACCTCGGCGATTTTTGTTTCTTCTCTATACCGGAAAATCTCAATGTTATTTCCGGC
GTCGGACAGCTCGCTGGGTCTGTATCAGCGGTCATGACCACCGAGAATGCCGGAAAATCT
GCTCCGACGAAGCCCAAACTTCCCGATCTATGGGCGAACAAAGATTTCCAAAAGTCGGCC
CAATTTTATTCTTCGGTGTTTGAGGATCTTGTTGCGGATGGTTTTTTGAACCCAAATTCG
AAAACCCTTTGCGTTGAAACGCCGATGGGTGCTGATGTTTTTGCGTTGAGGGAAATTGGG
GTTGCCGATTCCGTTGGGCTTTACAAGAAAGGTTCAAAGCCTTTGGTGATTACAGGTAAA
GCTGTTAAGCAACCCTTTGAAGATGATACATTCGATTTCATATTTTCCGGTGCCGGAATG
ATAGATAAGTCACTTAAGCCGGGAGATTTTGCGGCGGAGATTTGCCGGACTCTAAAACCC
GAAGGGTTTTTGGTTGTCCATACAGGTTCTAATGATACATACAGTTTCAATTCATTCCTT
CATTTGTTTAATTGTTGTACATTGATTAAGTCTAGGAATATTGATGGTTTCGATTCGACT
ATTCGTGAGATTGTTATGAAAAAGGATGTATTTGTTGAAGAAAAAGTGAGTGATTCCAAG
AACAATTGTCGTCATGTTCCCGATTATAAAATGAAACTGATTAAAAAAGCTGAGCCTTTG
ATTAAAGAGGAACCTAAGAAACCATGGATTACACTTAAGAAGAATGCACAGAGCATTAAG
TACTTGTCGTCCATGGCGGATATTAGTTTTAAGCAGAGATATGTCTATGTTGATGTTGGT
TCGAGGAGTTATGGTTCAAGCATTGTGAGTTGGTTCAAGAAACAGTATCCTAAGCAAAAC
AAGACCTTTGAGATATATGCTGTTGAGGCTGACAAGACTTTCCATGGGCAGTATAAGGAG
AAGAAAGGGGTTACTTTGTTGCCATATGCAGCTTGGGTTAAGAATGAGACGTTGTCGTTT
GAGATTAATCAAGATCCGGGTCATAAAGATGTGGCAAAAGGAAGAGGGATGGGAAGAATT
CAACCTGTTGAATCTTCTAGTGAATCTGCAAGTGAGGTGGATGTAATCCAAGGTTTTGAC
TTTGCTGAATGGTTGATGAGCGCGGTATCAGAGAAGGATTATGTGGTGATGAAGATGGAT
GTTGAAGGGACTGAATTCGATTTGATCCCGAGATTGATTGAAACAGGAGCAATTTGCTTG
ATTGATGAAGTGTTTCTTGAATGCCATTACAATAGGTGGCAGAAATGCTGCCCTGGGGAG
AGGTCTTCAAAGTATCCGAATACGTATAGCCAGTGTTTGGATCTCTTCACTTCTCTAAGA
GAAAGTGGAGTTCTTGTTCATCAATGGTGGTAA