Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030366
CDS Infomation

pacid=37455816 polypeptide=PGSC0003DMP400020617 locus=PGSC0003DMG400011619 ID=PGSC0003DMT400030366.v4.03 annot-version=v4.03
Sequence

ATGGCTCAGATTACAATAGACCCACAAGGTGAGAAAATTGAATCTTTTGTACTGTTGAGT
GGTCACAAGATTCCTGCTATTGGTTTGGGCACTTGGAGAGCTCATAATGCAAGGGATTCT
GTTTATACTGCTATTGTTGAGGCTGGCTACAGGCATGTTGACACAGCGGCAGAGTATGGA
GTCCAAGATGAGGTTGGTCATGGAATTAAGGCAGCTATACATGCAGGAGTAGAGAGATCA
GCCTTATTTGTCACATCTAAACTATGGTGTTATGATTTGTCACTGGAGAGAGTTCGACCT
GCATTGATGAAGACACTCAATGAATTGCAACTGGATTATCTTGATCTTTACCTGATTCAT
TGGCCCTTTCGTCTCAAGGACGGAGCAAGTAGACCTCCAAAAGCAGGGGAAGTGTCTGAC
TTCGATTGGGAAGGCGTTTGGAGAGAAATGGAGAAGTTAGTGAAAGATAAACTCGTACGA
GATATTGGAGTATGTAATTTCACTGTCAAGAAACTTAATAAGCTTTTAGATATTGCACAG
ATAATGCCTTCTGTATGCCAGATGGAGATGCACCCCGGATGGAGAAATGAAAAAATGTTG
GAAGCGTGCAAGAAAAATAATATTCACGTCACAGCGTATTCACCTTTGGGTTCGCGAGAA
GTTGATCTAATTCATCATCCTGTAGTAGAGAGAGTAGCAGGAAAGCTAAATAAAACGCCG
GGGCAGGTGCTAGTGAGGTGGGCTATACAAAGAGGAACGAGTACAATTCCGAAATCTGAT
CACTCAGAAAGAATAAAAGAGAACATTAAAGTGTTTTCATGGGAAATTCCAGAGCTAGAT
TTCCAAGCTATTTGTGATATTCCAGATCAGATGCGAGTATTAGATGGGGAGGAATTGTTT
GTGAACAAGAGTGATGGGCCTTACAAGAGCGTAACAGATATTTGGGACCACGAAATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400020617
PEP Infomation

pacid=37455816 transcript=PGSC0003DMT400030366 locus=PGSC0003DMG400011619 ID=PGSC0003DMT400030366.v4.03 annot-version=v4.03
Sequence

MAQITIDPQGEKIESFVLLSGHKIPAIGLGTWRAHNARDSVYTAIVEAGYRHVDTAAEYG
VQDEVGHGIKAAIHAGVERSALFVTSKLWCYDLSLERVRPALMKTLNELQLDYLDLYLIH
WPFRLKDGASRPPKAGEVSDFDWEGVWREMEKLVKDKLVRDIGVCNFTVKKLNKLLDIAQ
IMPSVCQMEMHPGWRNEKMLEACKKNNIHVTAYSPLGSREVDLIHHPVVERVAGKLNKTP
GQVLVRWAIQRGTSTIPKSDHSERIKENIKVFSWEIPELDFQAICDIPDQMRVLDGEELF
VNKSDGPYKSVTDIWDHEI*

Transcript Sequence

Transcript ID

PGSC0003DMT400030366
Transcript Infomation

pacid=37455816 locus=PGSC0003DMG400011619 ID=PGSC0003DMT400030366.v4.03 annot-version=v4.03
Sequence

ATGGCTCAGATTACAATAGACCCACAAGGTGAGAAAATTGAATCTTTTGTACTGTTGAGT
GGTCACAAGATTCCTGCTATTGGTTTGGGCACTTGGAGAGCTCATAATGCAAGGGATTCT
GTTTATACTGCTATTGTTGAGGCTGGCTACAGGCATGTTGACACAGCGGCAGAGTATGGA
GTCCAAGATGAGGTTGGTCATGGAATTAAGGCAGCTATACATGCAGGAGTAGAGAGATCA
GCCTTATTTGTCACATCTAAACTATGGTGTTATGATTTGTCACTGGAGAGAGTTCGACCT
GCATTGATGAAGACACTCAATGAATTGCAACTGGATTATCTTGATCTTTACCTGATTCAT
TGGCCCTTTCGTCTCAAGGACGGAGCAAGTAGACCTCCAAAAGCAGGGGAAGTGTCTGAC
TTCGATTGGGAAGGCGTTTGGAGAGAAATGGAGAAGTTAGTGAAAGATAAACTCGTACGA
GATATTGGAGTATGTAATTTCACTGTCAAGAAACTTAATAAGCTTTTAGATATTGCACAG
ATAATGCCTTCTGTATGCCAGATGGAGATGCACCCCGGATGGAGAAATGAAAAAATGTTG
GAAGCGTGCAAGAAAAATAATATTCACGTCACAGCGTATTCACCTTTGGGTTCGCGAGAA
GTTGATCTAATTCATCATCCTGTAGTAGAGAGAGTAGCAGGAAAGCTAAATAAAACGCCG
GGGCAGGTGCTAGTGAGGTGGGCTATACAAAGAGGAACGAGTACAATTCCGAAATCTGAT
CACTCAGAAAGAATAAAAGAGAACATTAAAGTGTTTTCATGGGAAATTCCAGAGCTAGAT
TTCCAAGCTATTTGTGATATTCCAGATCAGATGCGAGTATTAGATGGGGAGGAATTGTTT
GTGAACAAGAGTGATGGGCCTTACAAGAGCGTAACAGATATTTGGGACCACGAAATCTAA