Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030272
CDS Infomation

pacid=37457011 polypeptide=PGSC0003DMP400020562 locus=PGSC0003DMG400011578 ID=PGSC0003DMT400030272.v4.03 annot-version=v4.03
Sequence

ATGCACCACCACCACCCTCCTCCACCAACCACCACCAGAACCACCACCTCCACCACCACC
AAAATCTCAACACCCTTTATCATTCTTGCCACCACTATCTTCTCACTTCTCCTTATTCTT
ACCTTCTCCTTCAGTTCCCCTCCACCCCATCCCCACCCCAACCAACCCCACCCTTCCCTT
TTCCCAAATCATCAACCCCATCGTCTCCTTTTTCATCATAACCCAAATGACCAAAATACC
TTTCTACCCCCACCCCCTGCCATAGCTTACCTCATCTCTGGATCCACAAAAGACACTTCA
AGAATCATCCGTTTGCTATTTGCAGTATACCATCCAAGAAATCAGTATCTTCTTCATCTT
GATAGAAAAGCTTCTCAATATGAACGTGATGATCTTGCACTGTATGTTCAATCTGTGCCT
CTTTTTAAAGCTGCCCAGAATGTGAATTTTATTGGAAAAGCTGATTTTGTTTACCCAATG
GGGTCTTCTGCTTTGTCTGCTACTCTTCATGGAGCTTCTATTCTTCTGCGTGTTTCTGCT
CATTGGGATTGGTTTATTAATCTATCTGCTGATGATTATCCACTTGTTACTCAAGATGAT
CTTCTACACATTCTGTCATATATGCCCAAGGATCTTAATTTTGTCAACCACACAAGCTAC
ATTGGGTGGAGAGAGTCCCGGAAGTTGAAACCAATAGTTGTTGATCCTGGGCTCTATCTT
GAAGAGGAAGATGACGTATTTTATGCAACTCAGAAAAGGGAACTGCCTGATGCTTTTCGA
TTATTTTCAGGGTCTTCATCTAGTATCTTGAGTCGGAAGTTTATCGAGTTCTGCATCTTG
GGCACGGATAACCTACCCAGGACTCTGCTAATGTACTTGTCAAATTCACCATCCTCGGCA
TCTGTGTATTTCCCGACCATTCTGTGCAATTCAAGGAAATACAATAGAACAACAATCAAC
CACAACTTGCGGTATGCTTCATTTAACTCAAGACAAGAGGTCCTTCCACTCAATACCAGT
GACTTCAATGACCTGGTGATGAGTGGAGCAGTATTTGCTGCACCATTCGAGGCAAACAAT
CCGATTCTTGACCAGATCGACCATGAACTTCTCCACCACAAGCACGATGAACCAGTCCCT
GGCGGATGGTGTTTAGGTGAAAATGAAACTGATAAATGTACTGTCTGGGGAGACGCTGAA
GTTCTAAGACCAGGTCCAGGAGCACAGAGACTGGAAAAAAGATTTGTCCAGATTTTCAGT
AATGGTACATTTCGTTCTAGTCGATGTATCTACGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400020562
PEP Infomation

pacid=37457011 transcript=PGSC0003DMT400030272 locus=PGSC0003DMG400011578 ID=PGSC0003DMT400030272.v4.03 annot-version=v4.03
Sequence

MHHHHPPPPTTTRTTTSTTTKISTPFIILATTIFSLLLILTFSFSSPPPHPHPNQPHPSL
FPNHQPHRLLFHHNPNDQNTFLPPPPAIAYLISGSTKDTSRIIRLLFAVYHPRNQYLLHL
DRKASQYERDDLALYVQSVPLFKAAQNVNFIGKADFVYPMGSSALSATLHGASILLRVSA
HWDWFINLSADDYPLVTQDDLLHILSYMPKDLNFVNHTSYIGWRESRKLKPIVVDPGLYL
EEEDDVFYATQKRELPDAFRLFSGSSSSILSRKFIEFCILGTDNLPRTLLMYLSNSPSSA
SVYFPTILCNSRKYNRTTINHNLRYASFNSRQEVLPLNTSDFNDLVMSGAVFAAPFEANN
PILDQIDHELLHHKHDEPVPGGWCLGENETDKCTVWGDAEVLRPGPGAQRLEKRFVQIFS
NGTFRSSRCIYE*

Transcript Sequence

Transcript ID

PGSC0003DMT400030272
Transcript Infomation

pacid=37457011 locus=PGSC0003DMG400011578 ID=PGSC0003DMT400030272.v4.03 annot-version=v4.03
Sequence

ATGCACCACCACCACCCTCCTCCACCAACCACCACCAGAACCACCACCTCCACCACCACC
AAAATCTCAACACCCTTTATCATTCTTGCCACCACTATCTTCTCACTTCTCCTTATTCTT
ACCTTCTCCTTCAGTTCCCCTCCACCCCATCCCCACCCCAACCAACCCCACCCTTCCCTT
TTCCCAAATCATCAACCCCATCGTCTCCTTTTTCATCATAACCCAAATGACCAAAATACC
TTTCTACCCCCACCCCCTGCCATAGCTTACCTCATCTCTGGATCCACAAAAGACACTTCA
AGAATCATCCGTTTGCTATTTGCAGTATACCATCCAAGAAATCAGTATCTTCTTCATCTT
GATAGAAAAGCTTCTCAATATGAACGTGATGATCTTGCACTGTATGTTCAATCTGTGCCT
CTTTTTAAAGCTGCCCAGAATGTGAATTTTATTGGAAAAGCTGATTTTGTTTACCCAATG
GGGTCTTCTGCTTTGTCTGCTACTCTTCATGGAGCTTCTATTCTTCTGCGTGTTTCTGCT
CATTGGGATTGGTTTATTAATCTATCTGCTGATGATTATCCACTTGTTACTCAAGATGAT
CTTCTACACATTCTGTCATATATGCCCAAGGATCTTAATTTTGTCAACCACACAAGCTAC
ATTGGGTGGAGAGAGTCCCGGAAGTTGAAACCAATAGTTGTTGATCCTGGGCTCTATCTT
GAAGAGGAAGATGACGTATTTTATGCAACTCAGAAAAGGGAACTGCCTGATGCTTTTCGA
TTATTTTCAGGGTCTTCATCTAGTATCTTGAGTCGGAAGTTTATCGAGTTCTGCATCTTG
GGCACGGATAACCTACCCAGGACTCTGCTAATGTACTTGTCAAATTCACCATCCTCGGCA
TCTGTGTATTTCCCGACCATTCTGTGCAATTCAAGGAAATACAATAGAACAACAATCAAC
CACAACTTGCGGTATGCTTCATTTAACTCAAGACAAGAGGTCCTTCCACTCAATACCAGT
GACTTCAATGACCTGGTGATGAGTGGAGCAGTATTTGCTGCACCATTCGAGGCAAACAAT
CCGATTCTTGACCAGATCGACCATGAACTTCTCCACCACAAGCACGATGAACCAGTCCCT
GGCGGATGGTGTTTAGGTGAAAATGAAACTGATAAATGTACTGTCTGGGGAGACGCTGAA
GTTCTAAGACCAGGTCCAGGAGCACAGAGACTGGAAAAAAGATTTGTCCAGATTTTCAGT
AATGGTACATTTCGTTCTAGTCGATGTATCTACGAATAG