Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030214
CDS Infomation

pacid=37447375 polypeptide=PGSC0003DMP400020526 locus=PGSC0003DMG400011560 ID=PGSC0003DMT400030214.v4.03 annot-version=v4.03
Sequence

ATGGAAATTTCATATTACATACTCATCTTCACTTTCCTATACTTACTAAAGAACCATTTC
CTTGGAAAATTCCAAAATCTCCCACCAAGTCCCTTTATCTCTTTGCCCATTATAGGCCAT
CTATATCTACTCAAGAAAAAACCACTTCATAAAACATTAGCCAACATCTCAGAAAAACAT
GGTCCTTTGCTTTACCTTCGATTTGGATCGCGTCCAGTCTTGGTTGTCTCCTCCCCTTCT
CTTGCAGAGGAATGTTTCACCAAAAACGACATTGTTTTTGCCAATCGTGTGAGGCTGCTT
GCTGGAAAACATCTTGGTTACAACTATACCAGCCTTGTTTGGGCATCCTATGGCCAACAT
TGGCGCAACCTAAGAAGGATTGCTACTCATGAAATCTTGTCCACTCAGAGAGTTCAAATG
TTTGCTGATATCCGTAGAGATGAGGTTCGGGCTCTGCTGCAACGACTTCTAAGGGGGGAA
ACCAGTGGTGGAGATACTAACACAACTGTGGTGGATATGAAGGCGGCTTTCTTTGAGATG
ACACTGAATATCTTGATGATGATGATTGCTGGGAAGAGATACTATGGTGATTCTGCTGGG
AAATTGGAGGAATCTAGGAGGTTTAAAGAGATTGTTATAGAAACTTTCCAAGTGAGTGGT
GCAACAAATATAGGAGATTTTGTGCCACTACTTAAATGGATAGGAGTAAACAAACTTGAG
GATAAGGTTAAGTTACTGCAGGAGAAGAGGGATAAATTCATGCAAGAATTGATTGAAGAG
CACAAGAACCGTCGAAAGGGATCTTCTTTAGAGCAAAAGAACAATACCATGATTGATGTT
CTCTTATCCCTCCAAGATTCAGAGCCTGATTATTACACAGATGAAGTGATAAAGGGCATG
GGAATAGTCATGTTAACAGCAGGGACTGATACTACAGCTAGCACAATGGAATGGGCATTA
TCATTTCTTCTGAACAATCCTGAGGCACTAAAGAAAGTTCAAAATGAAATAGACACTCAC
CTTGGAGAGGCATCAAGATTACTTGATGAATCGGACCTTGCTCAACTCCCTTATCTCCAT
GGAATCATAAACGAAACTCTCCGATTGTGCCCAGCTGCTCCATTACTTGTGCCACACGAG
TCCTCGGATGAGTGTATCGTTGGAAGTTTTCATGTACCCCGTGGGACAATGTTGCTAGTG
AATTTGTGGGCAATACAAAATGATGCTAAATTGTGGGACAAGCCAAATGAGTTCAAGCCT
GAAAGGTTTATCGATTTCAAAGGTCAACGAGACGGGTTCAGGCTAATGCCATTTGGATAT
GGCAGGAGAGGATGTCCAGGTGAGAATTTGGCAATGCATGTGGCTGGTTTGGCATTAGGA
TCACTTATTCAGTGCTTTGAATGGGAGAGAGTAAGTGAAGAGCTGGTTGACATGACTGGA
GGACCTGGACTCACTATGCCCAAAGCAATACCATTGCTAGCAAAATGTAGGCCACGCCAA
AATACTGACAACCTTCTTGCTCATTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400020526
PEP Infomation

pacid=37447375 transcript=PGSC0003DMT400030214 locus=PGSC0003DMG400011560 ID=PGSC0003DMT400030214.v4.03 annot-version=v4.03
Sequence

MEISYYILIFTFLYLLKNHFLGKFQNLPPSPFISLPIIGHLYLLKKKPLHKTLANISEKH
GPLLYLRFGSRPVLVVSSPSLAEECFTKNDIVFANRVRLLAGKHLGYNYTSLVWASYGQH
WRNLRRIATHEILSTQRVQMFADIRRDEVRALLQRLLRGETSGGDTNTTVVDMKAAFFEM
TLNILMMMIAGKRYYGDSAGKLEESRRFKEIVIETFQVSGATNIGDFVPLLKWIGVNKLE
DKVKLLQEKRDKFMQELIEEHKNRRKGSSLEQKNNTMIDVLLSLQDSEPDYYTDEVIKGM
GIVMLTAGTDTTASTMEWALSFLLNNPEALKKVQNEIDTHLGEASRLLDESDLAQLPYLH
GIINETLRLCPAAPLLVPHESSDECIVGSFHVPRGTMLLVNLWAIQNDAKLWDKPNEFKP
ERFIDFKGQRDGFRLMPFGYGRRGCPGENLAMHVAGLALGSLIQCFEWERVSEELVDMTG
GPGLTMPKAIPLLAKCRPRQNTDNLLAHL*

Transcript Sequence

Transcript ID

PGSC0003DMT400030214
Transcript Infomation

pacid=37447375 locus=PGSC0003DMG400011560 ID=PGSC0003DMT400030214.v4.03 annot-version=v4.03
Sequence

ATGGAAATTTCATATTACATACTCATCTTCACTTTCCTATACTTACTAAAGAACCATTTC
CTTGGAAAATTCCAAAATCTCCCACCAAGTCCCTTTATCTCTTTGCCCATTATAGGCCAT
CTATATCTACTCAAGAAAAAACCACTTCATAAAACATTAGCCAACATCTCAGAAAAACAT
GGTCCTTTGCTTTACCTTCGATTTGGATCGCGTCCAGTCTTGGTTGTCTCCTCCCCTTCT
CTTGCAGAGGAATGTTTCACCAAAAACGACATTGTTTTTGCCAATCGTGTGAGGCTGCTT
GCTGGAAAACATCTTGGTTACAACTATACCAGCCTTGTTTGGGCATCCTATGGCCAACAT
TGGCGCAACCTAAGAAGGATTGCTACTCATGAAATCTTGTCCACTCAGAGAGTTCAAATG
TTTGCTGATATCCGTAGAGATGAGGTTCGGGCTCTGCTGCAACGACTTCTAAGGGGGGAA
ACCAGTGGTGGAGATACTAACACAACTGTGGTGGATATGAAGGCGGCTTTCTTTGAGATG
ACACTGAATATCTTGATGATGATGATTGCTGGGAAGAGATACTATGGTGATTCTGCTGGG
AAATTGGAGGAATCTAGGAGGTTTAAAGAGATTGTTATAGAAACTTTCCAAGTGAGTGGT
GCAACAAATATAGGAGATTTTGTGCCACTACTTAAATGGATAGGAGTAAACAAACTTGAG
GATAAGGTTAAGTTACTGCAGGAGAAGAGGGATAAATTCATGCAAGAATTGATTGAAGAG
CACAAGAACCGTCGAAAGGGATCTTCTTTAGAGCAAAAGAACAATACCATGATTGATGTT
CTCTTATCCCTCCAAGATTCAGAGCCTGATTATTACACAGATGAAGTGATAAAGGGCATG
GGAATAGTCATGTTAACAGCAGGGACTGATACTACAGCTAGCACAATGGAATGGGCATTA
TCATTTCTTCTGAACAATCCTGAGGCACTAAAGAAAGTTCAAAATGAAATAGACACTCAC
CTTGGAGAGGCATCAAGATTACTTGATGAATCGGACCTTGCTCAACTCCCTTATCTCCAT
GGAATCATAAACGAAACTCTCCGATTGTGCCCAGCTGCTCCATTACTTGTGCCACACGAG
TCCTCGGATGAGTGTATCGTTGGAAGTTTTCATGTACCCCGTGGGACAATGTTGCTAGTG
AATTTGTGGGCAATACAAAATGATGCTAAATTGTGGGACAAGCCAAATGAGTTCAAGCCT
GAAAGGTTTATCGATTTCAAAGGTCAACGAGACGGGTTCAGGCTAATGCCATTTGGATAT
GGCAGGAGAGGATGTCCAGGTGAGAATTTGGCAATGCATGTGGCTGGTTTGGCATTAGGA
TCACTTATTCAGTGCTTTGAATGGGAGAGAGTAAGTGAAGAGCTGGTTGACATGACTGGA
GGACCTGGACTCACTATGCCCAAAGCAATACCATTGCTAGCAAAATGTAGGCCACGCCAA
AATACTGACAACCTTCTTGCTCATTTGTAA