Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030164
CDS Infomation

pacid=37449331 polypeptide=PGSC0003DMP400020497 locus=PGSC0003DMG400011546 ID=PGSC0003DMT400030164.v4.03 annot-version=v4.03
Sequence

ATGGGAAGAAAGAGTTCGCAGCGAAAGAATGTTGTAATGTTGGATAATGATGACACGGAT
AGCGTGAGTTCATCGTCAACTTCTCGATCAGAGATGATTGTTTCAGGTGCAGAGGATGTT
CAAGTTGATAAGGAGACTTTGCTTGATCAATGTGTCGATGCACTCTATGAAAAAAGGGGA
TCAACAAGAGAGAAGGCCCTTGCGTCTATTATAGAAACCTTCAATAGCGACATACAACAT
GAGTTTGTTGAAAAGAAGTTTGCCACTTTGTTGCAACAATGTTTGAATTCCATTAAGAGG
GGCTCTTCCAAGGAGATAACTTTAGCATCTCATGTTCTTGGACTTCTGGCTTTAACTGCT
GGCCCCGGGGACAAAGCACATGAAATGTTGGAAGAATCAGTGTCTCCTATTACAGAGGCT
CTTAAATCTCGTTCTGACGCATCTAAGATATCTTCGCTACTGGAGTGTTTGGCCATTATC
ACTTTTGTTGGAGGCGAAGAACCAGAGGAAACAGAGAAGTCAATGCAATTGATGTGGCAA
GTCATTCATCCAAAAATTGGCCCTAATGTGGCTACTGCTAAACCTTCACCACCAATGATA
ACAGCAATGGTATCTGCTTGGTCTTTCCTACTTACCACTGTTGGTGGATTGGCACTAAAC
CCGAAAAGCTGGCAAGGGTCAATTTCCTACTTTTCAACTCTGCTGGATAAGGATGATAGA
GCTATCCGCATTGCAGCTGGTGAAGCACTTGCTTTAATTTTTGAAGTCGGGAGTCTTGAA
AAGTTCTCTGTTGAAGATAAAGGATCTAGTGACAGCTCCACAGACGAAGCAAACAAATCT
AAGGATATTTTACATATCCAGGGATTAAGGGCGAAGGTCCTGAATCAGGTGAGAAGTCTC
TCCGTAGAGGCTGGAGGCAAAGGGTCCGCCAAGAAGGACCTAAACAGTCAAAGAAATACA
TTTCGAGATATCTTGGAATTTCTTGAGGAAGGGTATACTCCAGAGAGCTCAATGAAGATT
GGCGGAGACTCGCTTACCACAACTACTTGGTGTCAACTGATACAGTTAAATTTCCTAAAG
CACTTTCTTGGAGGAGGTTTTGTAAAACACATGCAGGAAAATGAGTTCCTTCATACTGTC
TTTGGTTTCACACCGAAGAAAAAAATGCTTTCTGGTATTGAGCATCGTATATCCGGAACT
GAAAAGAGGATGTACAAGTCACCAAACTCGGTCGCTAACAAGGCCAGGACTCAATTTCGA
AACAAGCAAAGGATGTTATCCCAGGATAAGAATGTGGGCTACTACACTGCTGGAAATGAC
ATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400020497
PEP Infomation

pacid=37449331 transcript=PGSC0003DMT400030164 locus=PGSC0003DMG400011546 ID=PGSC0003DMT400030164.v4.03 annot-version=v4.03
Sequence

MGRKSSQRKNVVMLDNDDTDSVSSSSTSRSEMIVSGAEDVQVDKETLLDQCVDALYEKRG
STREKALASIIETFNSDIQHEFVEKKFATLLQQCLNSIKRGSSKEITLASHVLGLLALTA
GPGDKAHEMLEESVSPITEALKSRSDASKISSLLECLAIITFVGGEEPEETEKSMQLMWQ
VIHPKIGPNVATAKPSPPMITAMVSAWSFLLTTVGGLALNPKSWQGSISYFSTLLDKDDR
AIRIAAGEALALIFEVGSLEKFSVEDKGSSDSSTDEANKSKDILHIQGLRAKVLNQVRSL
SVEAGGKGSAKKDLNSQRNTFRDILEFLEEGYTPESSMKIGGDSLTTTTWCQLIQLNFLK
HFLGGGFVKHMQENEFLHTVFGFTPKKKMLSGIEHRISGTEKRMYKSPNSVANKARTQFR
NKQRMLSQDKNVGYYTAGNDI*

Transcript Sequence

Transcript ID

PGSC0003DMT400030164
Transcript Infomation

pacid=37449331 locus=PGSC0003DMG400011546 ID=PGSC0003DMT400030164.v4.03 annot-version=v4.03
Sequence

ATGGGAAGAAAGAGTTCGCAGCGAAAGAATGTTGTAATGTTGGATAATGATGACACGGAT
AGCGTGAGTTCATCGTCAACTTCTCGATCAGAGATGATTGTTTCAGGTGCAGAGGATGTT
CAAGTTGATAAGGAGACTTTGCTTGATCAATGTGTCGATGCACTCTATGAAAAAAGGGGA
TCAACAAGAGAGAAGGCCCTTGCGTCTATTATAGAAACCTTCAATAGCGACATACAACAT
GAGTTTGTTGAAAAGAAGTTTGCCACTTTGTTGCAACAATGTTTGAATTCCATTAAGAGG
GGCTCTTCCAAGGAGATAACTTTAGCATCTCATGTTCTTGGACTTCTGGCTTTAACTGCT
GGCCCCGGGGACAAAGCACATGAAATGTTGGAAGAATCAGTGTCTCCTATTACAGAGGCT
CTTAAATCTCGTTCTGACGCATCTAAGATATCTTCGCTACTGGAGTGTTTGGCCATTATC
ACTTTTGTTGGAGGCGAAGAACCAGAGGAAACAGAGAAGTCAATGCAATTGATGTGGCAA
GTCATTCATCCAAAAATTGGCCCTAATGTGGCTACTGCTAAACCTTCACCACCAATGATA
ACAGCAATGGTATCTGCTTGGTCTTTCCTACTTACCACTGTTGGTGGATTGGCACTAAAC
CCGAAAAGCTGGCAAGGGTCAATTTCCTACTTTTCAACTCTGCTGGATAAGGATGATAGA
GCTATCCGCATTGCAGCTGGTGAAGCACTTGCTTTAATTTTTGAAGTCGGGAGTCTTGAA
AAGTTCTCTGTTGAAGATAAAGGATCTAGTGACAGCTCCACAGACGAAGCAAACAAATCT
AAGGATATTTTACATATCCAGGGATTAAGGGCGAAGGTCCTGAATCAGGTGAGAAGTCTC
TCCGTAGAGGCTGGAGGCAAAGGGTCCGCCAAGAAGGACCTAAACAGTCAAAGAAATACA
TTTCGAGATATCTTGGAATTTCTTGAGGAAGGGTATACTCCAGAGAGCTCAATGAAGATT
GGCGGAGACTCGCTTACCACAACTACTTGGTGTCAACTGATACAGTTAAATTTCCTAAAG
CACTTTCTTGGAGGAGGTTTTGTAAAACACATGCAGGAAAATGAGTTCCTTCATACTGTC
TTTGGTTTCACACCGAAGAAAAAAATGCTTTCTGGTATTGAGCATCGTATATCCGGAACT
GAAAAGAGGATGTACAAGTCACCAAACTCGGTCGCTAACAAGGCCAGGACTCAATTTCGA
AACAAGCAAAGGATGTTATCCCAGGATAAGAATGTGGGCTACTACACTGCTGGAAATGAC
ATCTAA