Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030144
CDS Infomation

pacid=37447607 polypeptide=PGSC0003DMP400020488 locus=PGSC0003DMG400011542 ID=PGSC0003DMT400030144.v4.03 annot-version=v4.03
Sequence

ATGTTTCATCTTCTTTTCCTTGTTACTTTGTTTGTACATGTACAAAGTGTTCCTCAGAAT
AGCTCAATTGTTGAATATCTTCCTGGTTTTGATGGACCTCTTCCTTTTTATCTTGAGACT
GGATACATTGGAATTGGTAAATCTGAGGAAGTACAACTATTTTATTACTTTATTAAATCC
GAATCCGACCCGAGAAAAGATCCGCTCTTGCTATGGCTAACCGGAGGGCCCGGTTGCTCT
TCCTTCACAGGGTTGGCGTACGAAGTAGGTCCATTGGATTTTGGCCAAAAGGCATACAAT
GGTAGCCTACCAATTCTTGTTTCAAGTTCATATTCATGGACCAAGTTCGCGAGCATACTT
TTCTTGGATCAGCCTGCTAATACTGGGTTCTCGTACGCAACAACTTCAGAGGCGTGCAAG
TGTACTGATCTACAAGCGTGCGACCAGGCCTATGAATTTTTAAGAAAGTGGCTTATTAAT
CATCCAGAATTCATTTTGAACCCTTTCTATGTTTCTGGGGATTCATATTCAGGCATTACA
GTTCCAGTTATTGTTCAACTAATATCAGATGGAATTGAAGCAGGAAAAGAGCCATTAATC
AACCTTAAGGGCTATTCACTTGGAAATCCAGTAACATTTCCTGAGGAAGACAATTACCGA
ATTCCTTTTTGTCATGGTATGGGGCTAATATCTGACGAACTTTATGAGTCGTTGAACGAG
TTTTGCAAAGGCGATTACATAAACATAGGTCCTACCAACAAACTATGTGTTGAAAACTTT
AAAATGTTCAAGAATCTTGTGAGTGGTATAAATGAACAGCAAATACTAGAGCCTTTCTGT
GGAAAAGACTCTAACCGACCACACCAATTGTCTAGTGAAAGAAGGTCTCTTGAAGAGGAT
TTCATCTTTCAAAAATACGATGACCTCATCTGTCGAGAAAGTCGTGTCGCCACACGCAAG
ATTTCCACTTATTGGGCAAATGACCCGAGAGTTCAAGAGGCTCTCCATGTTAGAAAGGGA
ACTATAAAAAGACCATGGCTGAGATGTAGGAATAGTATTGTGTCTACAAGTTACACAATT
ACTTTCATGAATAGTATACCGTATCATGTAAATCTTAGTTCAAAAGGTTATCGATCACTT
ATATACAGTGGTGATCACGACATGGTTGTTCCTTTCCAATCGACACAAGCATGGATAAAG
TATCTAAATTATTCAACTATTGATGATTGGCGTCCATGGATGGTTGATGGACAAGTTGCA
GGTTACACAAGGTCTTTCTCAAATCATATGACATACGCAACAGTAAAGGGAGGAGGACAC
ACAGCTCCAGAGGACAAACACAAAGAGAGCTTCCATATGTTTAAAAGATGGATAGCCCAA
CAACCTTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400020488
PEP Infomation

pacid=37447607 transcript=PGSC0003DMT400030144 locus=PGSC0003DMG400011542 ID=PGSC0003DMT400030144.v4.03 annot-version=v4.03
Sequence

MFHLLFLVTLFVHVQSVPQNSSIVEYLPGFDGPLPFYLETGYIGIGKSEEVQLFYYFIKS
ESDPRKDPLLLWLTGGPGCSSFTGLAYEVGPLDFGQKAYNGSLPILVSSSYSWTKFASIL
FLDQPANTGFSYATTSEACKCTDLQACDQAYEFLRKWLINHPEFILNPFYVSGDSYSGIT
VPVIVQLISDGIEAGKEPLINLKGYSLGNPVTFPEEDNYRIPFCHGMGLISDELYESLNE
FCKGDYINIGPTNKLCVENFKMFKNLVSGINEQQILEPFCGKDSNRPHQLSSERRSLEED
FIFQKYDDLICRESRVATRKISTYWANDPRVQEALHVRKGTIKRPWLRCRNSIVSTSYTI
TFMNSIPYHVNLSSKGYRSLIYSGDHDMVVPFQSTQAWIKYLNYSTIDDWRPWMVDGQVA
GYTRSFSNHMTYATVKGGGHTAPEDKHKESFHMFKRWIAQQPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400030144
Transcript Infomation

pacid=37447607 locus=PGSC0003DMG400011542 ID=PGSC0003DMT400030144.v4.03 annot-version=v4.03
Sequence

ATGTTTCATCTTCTTTTCCTTGTTACTTTGTTTGTACATGTACAAAGTGTTCCTCAGAAT
AGCTCAATTGTTGAATATCTTCCTGGTTTTGATGGACCTCTTCCTTTTTATCTTGAGACT
GGATACATTGGAATTGGTAAATCTGAGGAAGTACAACTATTTTATTACTTTATTAAATCC
GAATCCGACCCGAGAAAAGATCCGCTCTTGCTATGGCTAACCGGAGGGCCCGGTTGCTCT
TCCTTCACAGGGTTGGCGTACGAAGTAGGTCCATTGGATTTTGGCCAAAAGGCATACAAT
GGTAGCCTACCAATTCTTGTTTCAAGTTCATATTCATGGACCAAGTTCGCGAGCATACTT
TTCTTGGATCAGCCTGCTAATACTGGGTTCTCGTACGCAACAACTTCAGAGGCGTGCAAG
TGTACTGATCTACAAGCGTGCGACCAGGCCTATGAATTTTTAAGAAAGTGGCTTATTAAT
CATCCAGAATTCATTTTGAACCCTTTCTATGTTTCTGGGGATTCATATTCAGGCATTACA
GTTCCAGTTATTGTTCAACTAATATCAGATGGAATTGAAGCAGGAAAAGAGCCATTAATC
AACCTTAAGGGCTATTCACTTGGAAATCCAGTAACATTTCCTGAGGAAGACAATTACCGA
ATTCCTTTTTGTCATGGTATGGGGCTAATATCTGACGAACTTTATGAGTCGTTGAACGAG
TTTTGCAAAGGCGATTACATAAACATAGGTCCTACCAACAAACTATGTGTTGAAAACTTT
AAAATGTTCAAGAATCTTGTGAGTGGTATAAATGAACAGCAAATACTAGAGCCTTTCTGT
GGAAAAGACTCTAACCGACCACACCAATTGTCTAGTGAAAGAAGGTCTCTTGAAGAGGAT
TTCATCTTTCAAAAATACGATGACCTCATCTGTCGAGAAAGTCGTGTCGCCACACGCAAG
ATTTCCACTTATTGGGCAAATGACCCGAGAGTTCAAGAGGCTCTCCATGTTAGAAAGGGA
ACTATAAAAAGACCATGGCTGAGATGTAGGAATAGTATTGTGTCTACAAGTTACACAATT
ACTTTCATGAATAGTATACCGTATCATGTAAATCTTAGTTCAAAAGGTTATCGATCACTT
ATATACAGTGGTGATCACGACATGGTTGTTCCTTTCCAATCGACACAAGCATGGATAAAG
TATCTAAATTATTCAACTATTGATGATTGGCGTCCATGGATGGTTGATGGACAAGTTGCA
GGTTACACAAGGTCTTTCTCAAATCATATGACATACGCAACAGTAAAGGGAGGAGGACAC
ACAGCTCCAGAGGACAAACACAAAGAGAGCTTCCATATGTTTAAAAGATGGATAGCCCAA
CAACCTTTGTAA