Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030110
CDS Infomation

pacid=37448950 polypeptide=PGSC0003DMP400020469 locus=PGSC0003DMG400011537 ID=PGSC0003DMT400030110.v4.03 annot-version=v4.03
Sequence

ATGAGAGAATGCATTTCAATCCACATCGGACAGGCCGGAATTCAGGTCGGAAATGCATGC
TGGGAGCTTTATTGCCTTGAACATGGCATTCAGCCTGATGGCCAGATGCCGAGTGACAAG
ACTGTTGGAGGAGGTGATGATGCATTTAACACCTTCTTCAGTGAAACTGGAGCTGGAAAG
CATGTTCCTCGTGCTGTTTTTGTAGATCTTGAGCCTACTGTCATTGATGAAGTCAGGACA
GGAACATACAGACAGCTCTTTCACCCTGAGCAACTCATTAGTGGCAAAGAAGATGCAGCC
AACAACTTTGCCCGTGGCCATTATACAATTGGGAAAGAAATAGTTGATCTTTGTTTGGAC
CGCATTAGGAAGCTTTCAGATAACTGTACTGGTCTTCAAGGTTTCCTGGTTTTTAATGCT
GTTGGTGGTGGCACTGGTTCTGGTCTTGGGTCACTTTTACTGGAGCGTCTCTCAGTTGAC
TATGGCAAGAAATCAAAACTTGGATTCACAATTTATCCCTCACCACACGTCTCAACATCT
GTTGTGGAACCTTACAACAGTGTGCTTTCAACTCACTCCCTGCTTGAGCACACTGATGTT
GCAATTCTTCTGGACAATGAGGCCATTTATGACATTTGCAAGCGCTCACTGGACATTGAG
CGCCCCACATACACCAACCTTAACCGCCTTATTTCACAGGTCATTTCTTCTCTGACTACT
TCTTTGAGGTTTGATGGTGCCCTGAATGTTGATGTGAATGAGTTCCAGACAAATCTTGTA
CCCTATCCCAGAATCCATTTTATGCTTTCTTCCTATGCTCCGGTCATTTCAGCTGAGAAG
GCTTACCACGAGCAGCTCTCAGTTGCAGAGATCACAAACAGCGCATTTGAACCCTCTTCT
ATGATGGTTAAGTGTGACCCTCGCCATGGCAAGTACATGGCCTGCTGTCTCATGTTCCGT
GGTGATGTTGTGCCAAAGGATGTCAACGCTGCTGTGGCCACCATCAAGACCAAGCGCACT
ATCCAATTTGTCGACTGGTGTCCTACTGGTTTCAAGTGTGGTATCAACTACCAACCACCT
ACTGTGGTTCCTGGAGGCGACCTTGCCAAGGTGCAAAGAGCTGTGTGCATGATCTCTAAC
TCAACTAGTGTTGCAGAGGTCTTCTCTCGCATTGACCACAAGTTTGATCTGATGTATGCC
AAGCGTGCTTTTGTGCACTGGTACGTTGGTGAGGGTATGGAGGAAGGTGAGTTCAGTGAA
GCCCGTGAGGACCTTGCTGCTCTTGAAAAGGATTACGAGGAGGTTGGTGCTGAATTGGAA
GATGAAGATGGTGGCGATGAAGGAGACGAGTACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400020469
PEP Infomation

pacid=37448950 transcript=PGSC0003DMT400030110 locus=PGSC0003DMG400011537 ID=PGSC0003DMT400030110.v4.03 annot-version=v4.03
Sequence

MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPHVSTS
VVEPYNSVLSTHSLLEHTDVAILLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMVKCDPRHGKYMACCLMFRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAELEDEDGGDEGDEY*

Transcript Sequence

Transcript ID

PGSC0003DMT400030110
Transcript Infomation

pacid=37448950 locus=PGSC0003DMG400011537 ID=PGSC0003DMT400030110.v4.03 annot-version=v4.03
Sequence

ATGAGAGAATGCATTTCAATCCACATCGGACAGGCCGGAATTCAGGTCGGAAATGCATGC
TGGGAGCTTTATTGCCTTGAACATGGCATTCAGCCTGATGGCCAGATGCCGAGTGACAAG
ACTGTTGGAGGAGGTGATGATGCATTTAACACCTTCTTCAGTGAAACTGGAGCTGGAAAG
CATGTTCCTCGTGCTGTTTTTGTAGATCTTGAGCCTACTGTCATTGATGAAGTCAGGACA
GGAACATACAGACAGCTCTTTCACCCTGAGCAACTCATTAGTGGCAAAGAAGATGCAGCC
AACAACTTTGCCCGTGGCCATTATACAATTGGGAAAGAAATAGTTGATCTTTGTTTGGAC
CGCATTAGGAAGCTTTCAGATAACTGTACTGGTCTTCAAGGTTTCCTGGTTTTTAATGCT
GTTGGTGGTGGCACTGGTTCTGGTCTTGGGTCACTTTTACTGGAGCGTCTCTCAGTTGAC
TATGGCAAGAAATCAAAACTTGGATTCACAATTTATCCCTCACCACACGTCTCAACATCT
GTTGTGGAACCTTACAACAGTGTGCTTTCAACTCACTCCCTGCTTGAGCACACTGATGTT
GCAATTCTTCTGGACAATGAGGCCATTTATGACATTTGCAAGCGCTCACTGGACATTGAG
CGCCCCACATACACCAACCTTAACCGCCTTATTTCACAGGTCATTTCTTCTCTGACTACT
TCTTTGAGGTTTGATGGTGCCCTGAATGTTGATGTGAATGAGTTCCAGACAAATCTTGTA
CCCTATCCCAGAATCCATTTTATGCTTTCTTCCTATGCTCCGGTCATTTCAGCTGAGAAG
GCTTACCACGAGCAGCTCTCAGTTGCAGAGATCACAAACAGCGCATTTGAACCCTCTTCT
ATGATGGTTAAGTGTGACCCTCGCCATGGCAAGTACATGGCCTGCTGTCTCATGTTCCGT
GGTGATGTTGTGCCAAAGGATGTCAACGCTGCTGTGGCCACCATCAAGACCAAGCGCACT
ATCCAATTTGTCGACTGGTGTCCTACTGGTTTCAAGTGTGGTATCAACTACCAACCACCT
ACTGTGGTTCCTGGAGGCGACCTTGCCAAGGTGCAAAGAGCTGTGTGCATGATCTCTAAC
TCAACTAGTGTTGCAGAGGTCTTCTCTCGCATTGACCACAAGTTTGATCTGATGTATGCC
AAGCGTGCTTTTGTGCACTGGTACGTTGGTGAGGGTATGGAGGAAGGTGAGTTCAGTGAA
GCCCGTGAGGACCTTGCTGCTCTTGAAAAGGATTACGAGGAGGTTGGTGCTGAATTGGAA
GATGAAGATGGTGGCGATGAAGGAGACGAGTACTGA