Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030052
CDS Infomation

pacid=37472657 polypeptide=PGSC0003DMP400020416 locus=PGSC0003DMG400011531 ID=PGSC0003DMT400030052.v4.03 annot-version=v4.03
Sequence

ATGAGTCAGTTTTCGTTTACTTCTTCTTCGAGCTCTAATTTCACTCTCTTCTATCATTCT
CAGAATCATAATCCTTCAAAGTTTCATGTTTCCTCCCCCTTTAGAACATCCCAGCCATCG
CCTTCACATCCTATTTTACCTCCCTTATGTTCCCGTGAGCCGTCTTCCTCATCACCACTT
CTTGAAGAAAAGCCAGAAACATCACAATCTTCTTCTAAGTTTGATCCTCAAGATAGACTA
AGTTACAATGATGAAGTTGCTGATGAGATCAGCACTACGAAGAAGTCCTTGGAAGAGTTA
CTTGTTGTTCGTAGGCCGGTGAAGGATCCTTACGTGGAAAATGATGATGAAAAAGGGGAA
GCGGTGAGTAACTTTGAGGATTCTCAAGAGAGAAATGATCTTCTGGAAGAACAACCATCT
TCCTCATCATTTCCACTTGATGCCGGCCTTAAGAAATTTGCAAAAAAAGTGCCAATTTTT
GAGCCAAGCAGGCTGGAATCTGACTCCGGAGAGAAGCCACTTAAAGTCAATTTAGATTTA
GCTCTGTATAAGGCAAAGATTTTGGCTCGAAAGTTTCAGTATGCAGATGCAGAGAAAATT
TTGCAACAGTGTATTGATGTCTGGCCAGAAGATGGGAGATCATATGTTGCTTTGGGAAAG
ATTTTGAGTAAGCAATCAAAACTAAATGAAGCCAGAACTGTTTACGAAAAAGGCTGCCAG
GCAACACAAGGAGAAAATCCTTACATTTGGCAGTGTTGGGCTATTCTGGAAAATAGGATG
GGTAATTTACGAAGAGCTAGAGAACTATTTGATGCCGCGACAGTTGCTGACAAGAAGCAT
ATTGCAGCTTGGCATGGATGGGCAGTTTTAGAGCTGAAGCAGGGGAATATAAAGAAGGCA
AGAAATCTTCTTGGCAAAGGCCTAAAGTTTTGTGGAGGTAATGAGTACGTATATCAAACT
CTTGCACTCCTCGAAGCTAAAGCAAAACGATATGAAAGAGCACGATATTTGTTCAAGCAG
GCAACAAGGTGTAACCGAAAAAGTTGTGCTAGTTGGCTGGCATGGGCTCAACTAGAGGCT
CAGTTAGAGAATAACCGTACCGCTAGGCAGCTGTTTGAGAAAGCAGTTCAAGCCAGTCCG
AAAAATAGGTTCGCGTGGCATGTATGGGGAGTTTTTGAAGCTAATCTAGGAAATATTGAC
CAAGGAAGGAAACTTCTAACAATAGGGCACATGGTGAATCCTAGAGATCCTGTTCTTCTC
CAGTCACTTGGTTTGATAGAATACAAGAACTCCAGTGCAAACCTTGCACGAGTTCTATTC
CGAAGGGCATCTCAACTGGATCCAAGGCATCAACCAGTTTGGATTGCTTGGGGTTGGATG
GAGTGGAAAGAAGGAAACATTTCCACAGCTCGGGAACTATACCAGAAAGCTCTATCGATC
AACTCAACAACTGAAAGTGCAGCACGCTGTCTTCAGGCTTGGGGTGTTTTGGAGCAAAGA
GCTGGAAATTTATCAGCTGCTCGAAGATTATTTAGATCGTCTCTGAATATAAACTCTCAG
AGCTATATAACATGGATGACATGGGCAAATTTGGAGGAAGATCAAGGTAACTCTATCCGT
GCAGAGGAAATTCGTAACCTCTACTTTCAACAGCGTACTGAAGTTGTTGATGATGAGTCG
TGGATTATGGGCTTCTTAGACGTCATTGATCCAGCGATTGATAGCATAAAGAGGCTCTTG
AATTTAGATCAAAACTCTTATTACAAGGTAAAAGAGTCTACTTCTAATACTACTGCTGGA
GACGACGTTGAGGGGAGCACAGAAGAATCAGCTTCCCCCTCCTCGGCTAACGTCAATGAC
AATAACATAGATACAGGAAGCGGCTTTGATTTAGATGGTTTTATCCGTGTAATGCTGTCT
TTGGACCCTTCAAAACTGGAAGTTCAGCTTACAGCATCTCTGAAGGACCCTCCGAAAATT
GCCAGAACCACTAATGGGGTGTGGCGACCAGCGACAAAAACTAGTAGAACATCAACAACA
CTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400020416
PEP Infomation

pacid=37472657 transcript=PGSC0003DMT400030052 locus=PGSC0003DMG400011531 ID=PGSC0003DMT400030052.v4.03 annot-version=v4.03
Sequence

MSQFSFTSSSSSNFTLFYHSQNHNPSKFHVSSPFRTSQPSPSHPILPPLCSREPSSSSPL
LEEKPETSQSSSKFDPQDRLSYNDEVADEISTTKKSLEELLVVRRPVKDPYVENDDEKGE
AVSNFEDSQERNDLLEEQPSSSSFPLDAGLKKFAKKVPIFEPSRLESDSGEKPLKVNLDL
ALYKAKILARKFQYADAEKILQQCIDVWPEDGRSYVALGKILSKQSKLNEARTVYEKGCQ
ATQGENPYIWQCWAILENRMGNLRRARELFDAATVADKKHIAAWHGWAVLELKQGNIKKA
RNLLGKGLKFCGGNEYVYQTLALLEAKAKRYERARYLFKQATRCNRKSCASWLAWAQLEA
QLENNRTARQLFEKAVQASPKNRFAWHVWGVFEANLGNIDQGRKLLTIGHMVNPRDPVLL
QSLGLIEYKNSSANLARVLFRRASQLDPRHQPVWIAWGWMEWKEGNISTARELYQKALSI
NSTTESAARCLQAWGVLEQRAGNLSAARRLFRSSLNINSQSYITWMTWANLEEDQGNSIR
AEEIRNLYFQQRTEVVDDESWIMGFLDVIDPAIDSIKRLLNLDQNSYYKVKESTSNTTAG
DDVEGSTEESASPSSANVNDNNIDTGSGFDLDGFIRVMLSLDPSKLEVQLTASLKDPPKI
ARTTNGVWRPATKTSRTSTTL*

Transcript Sequence

Transcript ID

PGSC0003DMT400030052
Transcript Infomation

pacid=37472657 locus=PGSC0003DMG400011531 ID=PGSC0003DMT400030052.v4.03 annot-version=v4.03
Sequence

ATGAGTCAGTTTTCGTTTACTTCTTCTTCGAGCTCTAATTTCACTCTCTTCTATCATTCT
CAGAATCATAATCCTTCAAAGTTTCATGTTTCCTCCCCCTTTAGAACATCCCAGCCATCG
CCTTCACATCCTATTTTACCTCCCTTATGTTCCCGTGAGCCGTCTTCCTCATCACCACTT
CTTGAAGAAAAGCCAGAAACATCACAATCTTCTTCTAAGTTTGATCCTCAAGATAGACTA
AGTTACAATGATGAAGTTGCTGATGAGATCAGCACTACGAAGAAGTCCTTGGAAGAGTTA
CTTGTTGTTCGTAGGCCGGTGAAGGATCCTTACGTGGAAAATGATGATGAAAAAGGGGAA
GCGGTGAGTAACTTTGAGGATTCTCAAGAGAGAAATGATCTTCTGGAAGAACAACCATCT
TCCTCATCATTTCCACTTGATGCCGGCCTTAAGAAATTTGCAAAAAAAGTGCCAATTTTT
GAGCCAAGCAGGCTGGAATCTGACTCCGGAGAGAAGCCACTTAAAGTCAATTTAGATTTA
GCTCTGTATAAGGCAAAGATTTTGGCTCGAAAGTTTCAGTATGCAGATGCAGAGAAAATT
TTGCAACAGTGTATTGATGTCTGGCCAGAAGATGGGAGATCATATGTTGCTTTGGGAAAG
ATTTTGAGTAAGCAATCAAAACTAAATGAAGCCAGAACTGTTTACGAAAAAGGCTGCCAG
GCAACACAAGGAGAAAATCCTTACATTTGGCAGTGTTGGGCTATTCTGGAAAATAGGATG
GGTAATTTACGAAGAGCTAGAGAACTATTTGATGCCGCGACAGTTGCTGACAAGAAGCAT
ATTGCAGCTTGGCATGGATGGGCAGTTTTAGAGCTGAAGCAGGGGAATATAAAGAAGGCA
AGAAATCTTCTTGGCAAAGGCCTAAAGTTTTGTGGAGGTAATGAGTACGTATATCAAACT
CTTGCACTCCTCGAAGCTAAAGCAAAACGATATGAAAGAGCACGATATTTGTTCAAGCAG
GCAACAAGGTGTAACCGAAAAAGTTGTGCTAGTTGGCTGGCATGGGCTCAACTAGAGGCT
CAGTTAGAGAATAACCGTACCGCTAGGCAGCTGTTTGAGAAAGCAGTTCAAGCCAGTCCG
AAAAATAGGTTCGCGTGGCATGTATGGGGAGTTTTTGAAGCTAATCTAGGAAATATTGAC
CAAGGAAGGAAACTTCTAACAATAGGGCACATGGTGAATCCTAGAGATCCTGTTCTTCTC
CAGTCACTTGGTTTGATAGAATACAAGAACTCCAGTGCAAACCTTGCACGAGTTCTATTC
CGAAGGGCATCTCAACTGGATCCAAGGCATCAACCAGTTTGGATTGCTTGGGGTTGGATG
GAGTGGAAAGAAGGAAACATTTCCACAGCTCGGGAACTATACCAGAAAGCTCTATCGATC
AACTCAACAACTGAAAGTGCAGCACGCTGTCTTCAGGCTTGGGGTGTTTTGGAGCAAAGA
GCTGGAAATTTATCAGCTGCTCGAAGATTATTTAGATCGTCTCTGAATATAAACTCTCAG
AGCTATATAACATGGATGACATGGGCAAATTTGGAGGAAGATCAAGGTAACTCTATCCGT
GCAGAGGAAATTCGTAACCTCTACTTTCAACAGCGTACTGAAGTTGTTGATGATGAGTCG
TGGATTATGGGCTTCTTAGACGTCATTGATCCAGCGATTGATAGCATAAAGAGGCTCTTG
AATTTAGATCAAAACTCTTATTACAAGGTAAAAGAGTCTACTTCTAATACTACTGCTGGA
GACGACGTTGAGGGGAGCACAGAAGAATCAGCTTCCCCCTCCTCGGCTAACGTCAATGAC
AATAACATAGATACAGGAAGCGGCTTTGATTTAGATGGTTTTATCCGTGTAATGCTGTCT
TTGGACCCTTCAAAACTGGAAGTTCAGCTTACAGCATCTCTGAAGGACCCTCCGAAAATT
GCCAGAACCACTAATGGGGTGTGGCGACCAGCGACAAAAACTAGTAGAACATCAACAACA
CTTTGA