Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030044
CDS Infomation

pacid=37471664 polypeptide=PGSC0003DMP400020412 locus=PGSC0003DMG400011528 ID=PGSC0003DMT400030044.v4.03 annot-version=v4.03
Sequence

ATGGCTGATGCCTTTGTGTCATTTGCAGTTCAAAAATTGAGTGATTTCCTCAGTAGCCAA
GTTTCCCTGAGAACAAATCTCAGAGAGGAAGTTGAGTGGCTGATAAAAGAGCTACACATC
ATAAAGTCATACCTCGGAGATGCAGAACAAAAGCAAACTGGAGATAATAGAGTTCAACAA
TGGCTGTTTGAAATCAACTCTATTGCTAATGACGCTGTTGCTATACTCGAGACTTACAGC
TTCGAGGCTGGTAAACATGCTAGTTGTCTCAAGGCTTGTGCTTGCATATGTAGGAAGGAG
AAGAAATTCTACAATGTGCTCGAGGAGATTCAATCACTCAAGCAGCGAATCATAGATGTC
TCTGGCAAGCAAGAGAATTATGGTATTACAAATATCAATTATAATGCAGGAGAAGGGCCA
AGTAATCAGGTTACAACATTGAGGAGAACTACCTCACATGTGGATGACCAGAATTACGTT
TTTGTTGGACTTCAGGATGTTGTAGAAAAATTGCTAGATGAACTTCTCAGAGCAGAGGCT
CGTCCAAGCGTCATCTCCATTTGCGGAATGGGTGGTTTAGGCAAGACCACACTTGCGAGA
AACCTCTATATCAATCCTAATATAGTCAATAGCTTCCATATGCGTGCTTGGATATGTGCT
CCTGAAGAGTACAACACCGTGGATGTCCTCAAGAATATCATAAAATCCATCCAATCTTGC
AGCAAGGAAATTCTAGATTGGTTGGAAAGGATGACAGAAAGAGATTTAGCAATATACCTT
CGTGCTCTTTTAAAAAAACGCAAATACCTTGTCGTGGTTGATGATCTATGGCATAGAGAA
GCGTGGGAGAGTTTGAAAAAAGCATTCCGAGATGGCAAGAAAGGCAGCAGAGTCATTATT
ACCACGCGCAGAGTGGATATCGCTAAAACAGCAGACGAAGGTTTTGTCCATAATCTCCGT
TTCCTAAGCCAAGACGAAAGTTGGGATCTCTTTTGTAGGAAACAACTCCATGTTCAAGCA
ATGGTTCCAAAAATGGAAAGGTTAGCTAGGGATATGGTGGAAAAGTGTGGAGGCTTACCT
CTTTCAATTGTTGTATTGAGCGGACTACTTTCGCATAAAAGGGGGCTAGACGAATGGCAA
AAGGTGAAAGATCACCTTTGGGAGAACATTATTGAAGATGAATGTATTGAAATCCCCAAC
ATATTATCATTAAGCTACAACGATTTGTCAATTGCGCTCAAGCAATGTTTTTTGTACTTT
GGTATTTTTCCAAAAGATCAAGTGGTCGAGGCTGAAAACATAATACGCTTGTGGATGGCG
GAAGGTTTCATACCAAGAGGAGAAGAAAGAATGGAGGATGTCGCTGAAGGCTTCTTGAAT
GAGCTGAAAAGACGAAGCTTAGTTCAAGTGGTAGATACATTCTGGGAAAAAGTTGAAGTA
TGTAGTGTTCATGATTTACTTCATGATCTTGCGATCCATAAGGCATTGAAGGTAAACTTC
TTTGACATTTATGATCCAATAAACCATTCCATATCCTCTTCATGTATCAGACATGGCATT
CATAGTCAAGAGAAAAGGTACCTCTCACTTGATCTTTCTAACTTGAAGTTGAGGTCAATT
ATGTTCTTCAATCTAGGATTTCGTAACATGAGTCATATAAACTTCAGTAGTGTGTTCCAA
CATGTATATGTGTTGTACATGGATATTATTGATGGCACTTTACCTGATGCCGTAGGAAGT
TTGTACCACCTCAAGTTCTTAAGATTGACAGGTGTTATTCATGATTTACCCTCCTCCATT
GGCAGCCTTAAGAATTTACAAACACTTTGTGTCAAATGTAATTTCAAACAGTTCTGCCAA
CTACCCCCCGAAACAGCTGACCTAATAAATTTAAGATATTTAGGTGTTCCCTATTCAGAA
CCTCTGAATCGTATAAGAAAACTCACAAGTCTTCAAGCTCTCGAAGGCGTCTCTTGTGAT
CAGTGGAAAGATGTTGATCCTGTTGATTTAGTCAATCTTCAAGAATTAAGCATGATTAGT
ATTACCAAATCTTACTCCCTCAACAAGATTAGCAACTTGAAAAACCTTAGCACTCTCAAG
TTGTTGTGTTATGCTGATGAATCATTCCCATCTCTTGAATTTCTTATTTCTTGTCATAAC
CTCAAGAAATTGTTGTTAGAAGGTAGAATAGAGAAACTGCCTTTGTTTCCAAATTCCATC
ACAATGCTGACTCTTGTCGACTCAAAACTCATGGAAGATCCGATGTTTATTTTGGGAATG
TTGCCAAACCTAAGGAATCTCTGTTTGTTTAGAGCTTATCAAGGAAAAGAAATAATCTGC
AGTGATAACAGTTTTAGTCAACTGAAGTTCCTTAGTCTTGATTGTCTTTGGAACCTAGAA
AGATGGAATTTAGCAACAAGTGCCATGCCTCTGATCAAAGCTCTTCGTATCGATCGCTGT
CTAAAGCTGAACCAAATTCCTGAGAGAATGAAGGATGTGGAGCCATTGCCTATTGAAGAG
AAATTAAATGCGCTGAAGCTTTTCAACCATATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400020412
PEP Infomation

pacid=37471664 transcript=PGSC0003DMT400030044 locus=PGSC0003DMG400011528 ID=PGSC0003DMT400030044.v4.03 annot-version=v4.03
Sequence

MADAFVSFAVQKLSDFLSSQVSLRTNLREEVEWLIKELHIIKSYLGDAEQKQTGDNRVQQ
WLFEINSIANDAVAILETYSFEAGKHASCLKACACICRKEKKFYNVLEEIQSLKQRIIDV
SGKQENYGITNINYNAGEGPSNQVTTLRRTTSHVDDQNYVFVGLQDVVEKLLDELLRAEA
RPSVISICGMGGLGKTTLARNLYINPNIVNSFHMRAWICAPEEYNTVDVLKNIIKSIQSC
SKEILDWLERMTERDLAIYLRALLKKRKYLVVVDDLWHREAWESLKKAFRDGKKGSRVII
TTRRVDIAKTADEGFVHNLRFLSQDESWDLFCRKQLHVQAMVPKMERLARDMVEKCGGLP
LSIVVLSGLLSHKRGLDEWQKVKDHLWENIIEDECIEIPNILSLSYNDLSIALKQCFLYF
GIFPKDQVVEAENIIRLWMAEGFIPRGEERMEDVAEGFLNELKRRSLVQVVDTFWEKVEV
CSVHDLLHDLAIHKALKVNFFDIYDPINHSISSSCIRHGIHSQEKRYLSLDLSNLKLRSI
MFFNLGFRNMSHINFSSVFQHVYVLYMDIIDGTLPDAVGSLYHLKFLRLTGVIHDLPSSI
GSLKNLQTLCVKCNFKQFCQLPPETADLINLRYLGVPYSEPLNRIRKLTSLQALEGVSCD
QWKDVDPVDLVNLQELSMISITKSYSLNKISNLKNLSTLKLLCYADESFPSLEFLISCHN
LKKLLLEGRIEKLPLFPNSITMLTLVDSKLMEDPMFILGMLPNLRNLCLFRAYQGKEIIC
SDNSFSQLKFLSLDCLWNLERWNLATSAMPLIKALRIDRCLKLNQIPERMKDVEPLPIEE
KLNALKLFNHM*

Transcript Sequence

Transcript ID

PGSC0003DMT400030044
Transcript Infomation

pacid=37471664 locus=PGSC0003DMG400011528 ID=PGSC0003DMT400030044.v4.03 annot-version=v4.03
Sequence

ATGGCTGATGCCTTTGTGTCATTTGCAGTTCAAAAATTGAGTGATTTCCTCAGTAGCCAA
GTTTCCCTGAGAACAAATCTCAGAGAGGAAGTTGAGTGGCTGATAAAAGAGCTACACATC
ATAAAGTCATACCTCGGAGATGCAGAACAAAAGCAAACTGGAGATAATAGAGTTCAACAA
TGGCTGTTTGAAATCAACTCTATTGCTAATGACGCTGTTGCTATACTCGAGACTTACAGC
TTCGAGGCTGGTAAACATGCTAGTTGTCTCAAGGCTTGTGCTTGCATATGTAGGAAGGAG
AAGAAATTCTACAATGTGCTCGAGGAGATTCAATCACTCAAGCAGCGAATCATAGATGTC
TCTGGCAAGCAAGAGAATTATGGTATTACAAATATCAATTATAATGCAGGAGAAGGGCCA
AGTAATCAGGTTACAACATTGAGGAGAACTACCTCACATGTGGATGACCAGAATTACGTT
TTTGTTGGACTTCAGGATGTTGTAGAAAAATTGCTAGATGAACTTCTCAGAGCAGAGGCT
CGTCCAAGCGTCATCTCCATTTGCGGAATGGGTGGTTTAGGCAAGACCACACTTGCGAGA
AACCTCTATATCAATCCTAATATAGTCAATAGCTTCCATATGCGTGCTTGGATATGTGCT
CCTGAAGAGTACAACACCGTGGATGTCCTCAAGAATATCATAAAATCCATCCAATCTTGC
AGCAAGGAAATTCTAGATTGGTTGGAAAGGATGACAGAAAGAGATTTAGCAATATACCTT
CGTGCTCTTTTAAAAAAACGCAAATACCTTGTCGTGGTTGATGATCTATGGCATAGAGAA
GCGTGGGAGAGTTTGAAAAAAGCATTCCGAGATGGCAAGAAAGGCAGCAGAGTCATTATT
ACCACGCGCAGAGTGGATATCGCTAAAACAGCAGACGAAGGTTTTGTCCATAATCTCCGT
TTCCTAAGCCAAGACGAAAGTTGGGATCTCTTTTGTAGGAAACAACTCCATGTTCAAGCA
ATGGTTCCAAAAATGGAAAGGTTAGCTAGGGATATGGTGGAAAAGTGTGGAGGCTTACCT
CTTTCAATTGTTGTATTGAGCGGACTACTTTCGCATAAAAGGGGGCTAGACGAATGGCAA
AAGGTGAAAGATCACCTTTGGGAGAACATTATTGAAGATGAATGTATTGAAATCCCCAAC
ATATTATCATTAAGCTACAACGATTTGTCAATTGCGCTCAAGCAATGTTTTTTGTACTTT
GGTATTTTTCCAAAAGATCAAGTGGTCGAGGCTGAAAACATAATACGCTTGTGGATGGCG
GAAGGTTTCATACCAAGAGGAGAAGAAAGAATGGAGGATGTCGCTGAAGGCTTCTTGAAT
GAGCTGAAAAGACGAAGCTTAGTTCAAGTGGTAGATACATTCTGGGAAAAAGTTGAAGTA
TGTAGTGTTCATGATTTACTTCATGATCTTGCGATCCATAAGGCATTGAAGGTAAACTTC
TTTGACATTTATGATCCAATAAACCATTCCATATCCTCTTCATGTATCAGACATGGCATT
CATAGTCAAGAGAAAAGGTACCTCTCACTTGATCTTTCTAACTTGAAGTTGAGGTCAATT
ATGTTCTTCAATCTAGGATTTCGTAACATGAGTCATATAAACTTCAGTAGTGTGTTCCAA
CATGTATATGTGTTGTACATGGATATTATTGATGGCACTTTACCTGATGCCGTAGGAAGT
TTGTACCACCTCAAGTTCTTAAGATTGACAGGTGTTATTCATGATTTACCCTCCTCCATT
GGCAGCCTTAAGAATTTACAAACACTTTGTGTCAAATGTAATTTCAAACAGTTCTGCCAA
CTACCCCCCGAAACAGCTGACCTAATAAATTTAAGATATTTAGGTGTTCCCTATTCAGAA
CCTCTGAATCGTATAAGAAAACTCACAAGTCTTCAAGCTCTCGAAGGCGTCTCTTGTGAT
CAGTGGAAAGATGTTGATCCTGTTGATTTAGTCAATCTTCAAGAATTAAGCATGATTAGT
ATTACCAAATCTTACTCCCTCAACAAGATTAGCAACTTGAAAAACCTTAGCACTCTCAAG
TTGTTGTGTTATGCTGATGAATCATTCCCATCTCTTGAATTTCTTATTTCTTGTCATAAC
CTCAAGAAATTGTTGTTAGAAGGTAGAATAGAGAAACTGCCTTTGTTTCCAAATTCCATC
ACAATGCTGACTCTTGTCGACTCAAAACTCATGGAAGATCCGATGTTTATTTTGGGAATG
TTGCCAAACCTAAGGAATCTCTGTTTGTTTAGAGCTTATCAAGGAAAAGAAATAATCTGC
AGTGATAACAGTTTTAGTCAACTGAAGTTCCTTAGTCTTGATTGTCTTTGGAACCTAGAA
AGATGGAATTTAGCAACAAGTGCCATGCCTCTGATCAAAGCTCTTCGTATCGATCGCTGT
CTAAAGCTGAACCAAATTCCTGAGAGAATGAAGGATGTGGAGCCATTGCCTATTGAAGAG
AAATTAAATGCGCTGAAGCTTTTCAACCATATGTGA