Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030042
CDS Infomation

pacid=37476190 polypeptide=PGSC0003DMP400020411 locus=PGSC0003DMG400011527 ID=PGSC0003DMT400030042.v4.03 annot-version=v4.03
Sequence

ATGGCTGATGCCTTTGTGTCATTTGCAGTTCAAAAATTGGGTGATTTCCTCATTCAGGAA
ATTAACCTACGTTTAAGCCTAAGAGAGGATATGCAGTGGCTCCGAAACGAGCTTCTCTTC
ATGCAGTCTTTCCTCAAAGATGCAGAACTAAAACAATGTGGAGATCATAGAGTTCAACAA
TGGGTGTTTGAAATCAATTCTGTTGCGAATGATGCTGTCGCTATACTCGAGACTTACAGC
TTTGAGACTAGTAAACGTGCTAGTCGTCTCAAGGCTTGCGCTTGCATATGTAGGAAACAG
AAGAAATTCCACAATGTCGCTGAGGAGATTCAATCACTCAAGCAACGAGTCATGGATATC
TCTCGTAAACGAGATACTTATGGTATTACAAATATCAATAGTAATGCTGGAGAAGGGCCA
AGTAATCAGGTTAGAACATTGAGGAGAACTACCTCATATATAGATGATGATCACATTTTT
GTTGGCTTTCAGGATGTTGTACACACATTGCTATCTGAACTTCTCAAAGCAGAGCCTCGT
CGAAGAGTCCTCTCCGTTTATGGAATGGGCGGTTTAGGCAAGACCACTCTTGCGAGGAAA
CTTTACACCAGTCCTAATATAGCCTCTAGCTTCCTTACACGAGCTTGGATATGTGTTTCT
CAAGAGTACAACACAATGGATCTTCTTAAAACTATCATAAAATCCATCCAAGGTTGCGCC
AAGGAAACTCTAGATTTGTTGGAAAAGATGGCAGAAATAGATCTAGAAAATCACCTTCGT
AAACTATTAACAGAACGCAAATACCTTGTGGTGGTTGATGATGTATGGCAGAGAGAAGCA
TGGGAGAGTTTGAAAAGAGCATTCCCGGATAGCAAGAATGGCAGCAGAGTCATTATTACC
ACACGCAAAGAGGATGTTGCTGAAAGAGCAGACGACAGAGGATTTGTCCATAAACTTCGT
TTCCTAACCCAAGGAGAAAGTTGGGATCTCTTTTGTAGGAAACTGCTTGATGTTCGAGCA
ATGGTTCCAGAAATGGAAAGTCTAGCTAAGGATATGGTGGAGAAGTGTAGAGGCTTACCT
CTTGCAATTGTTGTATTGAGCGGACTACTTTCGCATAAAAAGGGGCTAGACGAATGGCAA
AAGGTGAAAGATCACCTTTGGAAGAACATCATTGAAGATAAATCTATTGAAATCTCCAAC
ATACTATCATTAAGCTACAATGATTTGTCAACTCCGCTCAAGCAGTGTTTTCTCTACTTT
GGTATTTTTCCAGAAGATCAAGTGCTCGAGGCTGATAACATAATACGGTTGTGGATGGCG
GAGGGTTTCATACCCAGAGGAGAAGAAAGAATGGAGGATGTTGCTGAAGGCTTCTTGAAT
CAGCTGATAAGACGAAGCTTGGTTCAAGTGACTAAAACATTTTGGGAAAAAGTTACTGAA
TGTAGGGTTCATGATTTACTCCATGATCTTGCGATACAAAAGGCATTGGAGGTAAACTTC
TTTGACGTTTATGATCCAAGAAGCCACTCCATATCCTCTTTATGTATCAGACATACCATT
CATAGTCAAAGAGAAAGGTACCTCTCACTTGATCTTTCTAACTTAAAGTTGAGATCAATT
ATGTTCTTCGATCCAGATTTTTGTAAGATGTGTCTTATAAACTCCAGTAGTGTGTTCCAA
CATCTATATGTGTTGTACTTGGAGATGCGTGTTGACGACAGGTATTTTGTATTTGTACCT
GATGCCATAGGAAGTTTGTACCACCTCAAGTTCTTAAGATTAGGAGGTATCCATGATCTT
CCGTCTTCCATTGGCAACCTCAAGAATCTACAGACACTTGTTGTCAATGAGGGCAGACAC
AATTGTGTACTACCCCCCGAGACAGCTGACCTAATAAATCTAAGATATTTAGATGCTCTG
TATTCACCACCTCTGAAACGTCTAAGCAAACTCACTAGTCTTCATGTTTTTAAAGGCATT
GGTTGTAATCAGTGGGAAGATATTGACCCTGTTGATTTGGTCAATCTTCGAGAATTAAGT
ATGCGTTATATTAACATATATTACTCCCTAAGCAAGATTAGAAGATTGAAAAACCTTAGT
ACTCTCAGATTGTTTTGTGATGAACGTATTGTAACAGACTTATATCGATTCCCATCCCTT
AATTTTCTTAATTGTTGTGAAAAGCTCCAGAAATTGTGGTTAAAAGGGAAAATAGAGATA
CTGCCAGATCTGTTTCCAAATTCCATCACCATGATGGTTCTTTGGAGGTCACAACTCACA
AAAGATCCGATGCCTATTTTGGGAATGTTGCCAAACCTAAGAGATCTCATATTGCAAGAA
GCTTATAATGGAAAAGAAATAATGTGCAGTGATAACAGCTTCCGTCAACTAGAGTTCCTT
CATCTCTATCATCTTTGGAATCTAGAAAGATGGCATTTAGCCACAAGTGCCATGCCTCTC
ATTAAAGGTCTTGCTATCGATCGCTGTCCAAAGCTGAAGGAGATTCCAGAGAGAATGAAA
GATGTTGAAGAGAAGTTAAATGTGGTGGATCTTCACAAGCATATGGGAGGTTTTATTTTT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400020411
PEP Infomation

pacid=37476190 transcript=PGSC0003DMT400030042 locus=PGSC0003DMG400011527 ID=PGSC0003DMT400030042.v4.03 annot-version=v4.03
Sequence

MADAFVSFAVQKLGDFLIQEINLRLSLREDMQWLRNELLFMQSFLKDAELKQCGDHRVQQ
WVFEINSVANDAVAILETYSFETSKRASRLKACACICRKQKKFHNVAEEIQSLKQRVMDI
SRKRDTYGITNINSNAGEGPSNQVRTLRRTTSYIDDDHIFVGFQDVVHTLLSELLKAEPR
RRVLSVYGMGGLGKTTLARKLYTSPNIASSFLTRAWICVSQEYNTMDLLKTIIKSIQGCA
KETLDLLEKMAEIDLENHLRKLLTERKYLVVVDDVWQREAWESLKRAFPDSKNGSRVIIT
TRKEDVAERADDRGFVHKLRFLTQGESWDLFCRKLLDVRAMVPEMESLAKDMVEKCRGLP
LAIVVLSGLLSHKKGLDEWQKVKDHLWKNIIEDKSIEISNILSLSYNDLSTPLKQCFLYF
GIFPEDQVLEADNIIRLWMAEGFIPRGEERMEDVAEGFLNQLIRRSLVQVTKTFWEKVTE
CRVHDLLHDLAIQKALEVNFFDVYDPRSHSISSLCIRHTIHSQRERYLSLDLSNLKLRSI
MFFDPDFCKMCLINSSSVFQHLYVLYLEMRVDDRYFVFVPDAIGSLYHLKFLRLGGIHDL
PSSIGNLKNLQTLVVNEGRHNCVLPPETADLINLRYLDALYSPPLKRLSKLTSLHVFKGI
GCNQWEDIDPVDLVNLRELSMRYINIYYSLSKIRRLKNLSTLRLFCDERIVTDLYRFPSL
NFLNCCEKLQKLWLKGKIEILPDLFPNSITMMVLWRSQLTKDPMPILGMLPNLRDLILQE
AYNGKEIMCSDNSFRQLEFLHLYHLWNLERWHLATSAMPLIKGLAIDRCPKLKEIPERMK
DVEEKLNVVDLHKHMGGFIF*

Transcript Sequence

Transcript ID

PGSC0003DMT400030042
Transcript Infomation

pacid=37476190 locus=PGSC0003DMG400011527 ID=PGSC0003DMT400030042.v4.03 annot-version=v4.03
Sequence

ATGGCTGATGCCTTTGTGTCATTTGCAGTTCAAAAATTGGGTGATTTCCTCATTCAGGAA
ATTAACCTACGTTTAAGCCTAAGAGAGGATATGCAGTGGCTCCGAAACGAGCTTCTCTTC
ATGCAGTCTTTCCTCAAAGATGCAGAACTAAAACAATGTGGAGATCATAGAGTTCAACAA
TGGGTGTTTGAAATCAATTCTGTTGCGAATGATGCTGTCGCTATACTCGAGACTTACAGC
TTTGAGACTAGTAAACGTGCTAGTCGTCTCAAGGCTTGCGCTTGCATATGTAGGAAACAG
AAGAAATTCCACAATGTCGCTGAGGAGATTCAATCACTCAAGCAACGAGTCATGGATATC
TCTCGTAAACGAGATACTTATGGTATTACAAATATCAATAGTAATGCTGGAGAAGGGCCA
AGTAATCAGGTTAGAACATTGAGGAGAACTACCTCATATATAGATGATGATCACATTTTT
GTTGGCTTTCAGGATGTTGTACACACATTGCTATCTGAACTTCTCAAAGCAGAGCCTCGT
CGAAGAGTCCTCTCCGTTTATGGAATGGGCGGTTTAGGCAAGACCACTCTTGCGAGGAAA
CTTTACACCAGTCCTAATATAGCCTCTAGCTTCCTTACACGAGCTTGGATATGTGTTTCT
CAAGAGTACAACACAATGGATCTTCTTAAAACTATCATAAAATCCATCCAAGGTTGCGCC
AAGGAAACTCTAGATTTGTTGGAAAAGATGGCAGAAATAGATCTAGAAAATCACCTTCGT
AAACTATTAACAGAACGCAAATACCTTGTGGTGGTTGATGATGTATGGCAGAGAGAAGCA
TGGGAGAGTTTGAAAAGAGCATTCCCGGATAGCAAGAATGGCAGCAGAGTCATTATTACC
ACACGCAAAGAGGATGTTGCTGAAAGAGCAGACGACAGAGGATTTGTCCATAAACTTCGT
TTCCTAACCCAAGGAGAAAGTTGGGATCTCTTTTGTAGGAAACTGCTTGATGTTCGAGCA
ATGGTTCCAGAAATGGAAAGTCTAGCTAAGGATATGGTGGAGAAGTGTAGAGGCTTACCT
CTTGCAATTGTTGTATTGAGCGGACTACTTTCGCATAAAAAGGGGCTAGACGAATGGCAA
AAGGTGAAAGATCACCTTTGGAAGAACATCATTGAAGATAAATCTATTGAAATCTCCAAC
ATACTATCATTAAGCTACAATGATTTGTCAACTCCGCTCAAGCAGTGTTTTCTCTACTTT
GGTATTTTTCCAGAAGATCAAGTGCTCGAGGCTGATAACATAATACGGTTGTGGATGGCG
GAGGGTTTCATACCCAGAGGAGAAGAAAGAATGGAGGATGTTGCTGAAGGCTTCTTGAAT
CAGCTGATAAGACGAAGCTTGGTTCAAGTGACTAAAACATTTTGGGAAAAAGTTACTGAA
TGTAGGGTTCATGATTTACTCCATGATCTTGCGATACAAAAGGCATTGGAGGTAAACTTC
TTTGACGTTTATGATCCAAGAAGCCACTCCATATCCTCTTTATGTATCAGACATACCATT
CATAGTCAAAGAGAAAGGTACCTCTCACTTGATCTTTCTAACTTAAAGTTGAGATCAATT
ATGTTCTTCGATCCAGATTTTTGTAAGATGTGTCTTATAAACTCCAGTAGTGTGTTCCAA
CATCTATATGTGTTGTACTTGGAGATGCGTGTTGACGACAGGTATTTTGTATTTGTACCT
GATGCCATAGGAAGTTTGTACCACCTCAAGTTCTTAAGATTAGGAGGTATCCATGATCTT
CCGTCTTCCATTGGCAACCTCAAGAATCTACAGACACTTGTTGTCAATGAGGGCAGACAC
AATTGTGTACTACCCCCCGAGACAGCTGACCTAATAAATCTAAGATATTTAGATGCTCTG
TATTCACCACCTCTGAAACGTCTAAGCAAACTCACTAGTCTTCATGTTTTTAAAGGCATT
GGTTGTAATCAGTGGGAAGATATTGACCCTGTTGATTTGGTCAATCTTCGAGAATTAAGT
ATGCGTTATATTAACATATATTACTCCCTAAGCAAGATTAGAAGATTGAAAAACCTTAGT
ACTCTCAGATTGTTTTGTGATGAACGTATTGTAACAGACTTATATCGATTCCCATCCCTT
AATTTTCTTAATTGTTGTGAAAAGCTCCAGAAATTGTGGTTAAAAGGGAAAATAGAGATA
CTGCCAGATCTGTTTCCAAATTCCATCACCATGATGGTTCTTTGGAGGTCACAACTCACA
AAAGATCCGATGCCTATTTTGGGAATGTTGCCAAACCTAAGAGATCTCATATTGCAAGAA
GCTTATAATGGAAAAGAAATAATGTGCAGTGATAACAGCTTCCGTCAACTAGAGTTCCTT
CATCTCTATCATCTTTGGAATCTAGAAAGATGGCATTTAGCCACAAGTGCCATGCCTCTC
ATTAAAGGTCTTGCTATCGATCGCTGTCCAAAGCTGAAGGAGATTCCAGAGAGAATGAAA
GATGTTGAAGAGAAGTTAAATGTGGTGGATCTTCACAAGCATATGGGAGGTTTTATTTTT
TAA