Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400030011
CDS Infomation

pacid=37472979 polypeptide=PGSC0003DMP400020396 locus=PGSC0003DMG400011517 ID=PGSC0003DMT400030011.v4.03 annot-version=v4.03
Sequence

ATGGCTGATGCCGTTGTGTCATTTGCAGTTCAAAAATTGGGTGATTTCCTCATTCAGGAA
GTTAACCTACGTTTAAGTCTAAGAGAGGATATGAAGTGGATGAGAACTGAGCTTCTCTTC
ATGCAGTCTTTCCTCAAAGATACAGAACTAAAACAATATGGAGATCATACAATTCAACAA
TGGGTAACTGAGATGAACTCTATTGCTAATGACGCTGTTGCTATACTCGAGACTTACAGT
TTAGAGGCTGGTAAAGGTGCTAGTCGTCTCAAGGCGTGCGCTTGCATATGTAGGAAGGAG
AAGAAATTCTACAATGTCGCCAAGGAGATTCAATCACTCAAGCAACGAATCATGGATATC
TCTCGTAAAAGAGATACTTATAGTATTACAAATATCAATAGTAATGCTGGAGAAGGAACA
AGTAATCAGGTTACAACACTGAGGAGAACTACCTCATATGTGGATGACCAGGATTACATT
TTTGTTGGACTTCAGGATGTTGTAGAATCATTGCTAGCTGAACTTCTCAAAGCAGAGCCT
CGTCGAAACGTCCTCTCCATTCATGGGATGGGTGGATTGGGCAAGACCACTCTTGCCAGA
AACCTCTACAACAGTCCTAATATAGTCTCAAGCTTCCCTACTCGCACTTGGATATGTGTT
TCTCAAGAGTACAACACAATGGATCTTTTTAAGACTATCATAAAATCCATCCAAGGTTGC
GCCAAGGAAACTCTAGATTTGTTGGAAAAGATGGCAGAAACAGATCTAGAAAATCACCTT
CGTGATCTATTAGAAGGATGCAAATACCTTGTGGTGGTTGATGATGTGTGGCAGAAAGAA
GCATGGGAGAGTTTGAAAAGAGCATTTCCGGATAGAAATAATGGCAGCAGAGTTATTATC
ACCACGCGCAACCAGGATGTCGCTGAAAGAGCAAACAACAGAGGTTTTGTCCATAAACTT
CGTTTCCTAAAACAAGAAGAAAGTTGGGATCTCTTTTGTAGGAAACTACTTGATGTTCGA
GCAATGGTTCCAGCAATGGAAAGTCTAGCTAAGGATATGGTGGAAAAATGTAGAGGCTTA
CCTCTTGCAATTGTTGTATTGAGTGGACTACTTTCGCATAGATGGGGGCTAGACAAATGG
CAAAACGTGAAAGACTGCCTTTGGAAGGACATTGAAGAAGACTCTATTGAAATCTCCTAC
ATACTATCATTAAGCTTCAACGATTTGTCAGCTGCGCTCAAGAAGTGTTTTCTCTACTTT
GGTGTTTTTCCAGAAGATCAAGTGATCGATGCTGACGACATAATGCGGTTGTGGATGACA
GAGGGTTTCATCATACCAAGAGGAGAAGAAAGAATGGAGGATGTCGCTGAAGGCTTCTTG
AATGAGCTGATAAGACGAAGCTTGGTTCAAGTAGCTCAAACATTTTGGGAAAAAGTTACT
GTATGTAGGGTTCATGATTTACTTCGTGATCTTGCCATACAAAAGGCATTGGAGGTAAAC
TTCTTTGACATTTATGATCCAAGAAAGAACTTGAAATCCACTTCATGTATAAGACATGCC
ATTCATAGTGAAGGAGAAAGGTACCTCTCATCACTTGATCTTTCTAACTCGAAGTTGAGG
TCAATTATGTTCTTTGATCCACATATTTGTAATGTGTTCCAACATATAGATGTGTTCCGA
CATATATATGTGTTGTACTTGGATATTGATTATGGTAAAGTTATACCTGATGCCATAGGG
AGTTTGTACAACCTCAAGTTGTTACGCTTGAGTGTTGTCAGTAAAATTCCCTCCTCCATC
GGCAACCTCAAGAATCTACAGACACTTGTTGTTGTCAATATGGACAGACGCTTTTGCCAA
CTACCCCCCGAAACAGCTGACCTAATAAATTTAAGACATTTAGTTGTTCCATATTCTATA
CCTCTGGCAGGTATAAGCAAACTCACTAGTCTTCAAGTTCTTCGCCTTGATTGTGATCAG
TGGAAAGAAGTTGACCCAGTTGATTTAGTCAATCTTCGAGAATTAGAGATGCGTAATATA
TACAAATCTTACTCCCTAAACAACATTAGCAGCTTGAAAAACCTTAACACTCTCAAATTG
TGTATTTTGCTTGGTCCACAATCTACATATCCATTCCCATCCCTTGAATTTGTTAATAGT
TGTGAAAAGCTCCAGAAATTGTTGTTAGGTGGGAGATTAGAGAAACTGCCTGTGTTTCCA
GATTCCATCACAATGATATTTCTTTGGGAGTCAAGACTGACAAAAGATCCGATGCCTATT
TTGGGAATGTTACCAAACCTAAGGAATCTCGAATTAGAAGCAGCTTATGAAGGAGAAGAA
ATAATGTGCAGTGATTACAGCTTCAGTCAACTAGAGCTCCTTCATCTTTATGGTCTTGAC
AACTTAGAAAGATGGCATTTAGGCACAAATGCCATGCCTCTCATTAAAGATCTTGTTATC
CATCATTGTCCAAAGCTGAGGGAGATTCCAGAGAGAATGAAAGACGTGAAGCATTTCAAA
CGTATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400020396
PEP Infomation

pacid=37472979 transcript=PGSC0003DMT400030011 locus=PGSC0003DMG400011517 ID=PGSC0003DMT400030011.v4.03 annot-version=v4.03
Sequence

MADAVVSFAVQKLGDFLIQEVNLRLSLREDMKWMRTELLFMQSFLKDTELKQYGDHTIQQ
WVTEMNSIANDAVAILETYSLEAGKGASRLKACACICRKEKKFYNVAKEIQSLKQRIMDI
SRKRDTYSITNINSNAGEGTSNQVTTLRRTTSYVDDQDYIFVGLQDVVESLLAELLKAEP
RRNVLSIHGMGGLGKTTLARNLYNSPNIVSSFPTRTWICVSQEYNTMDLFKTIIKSIQGC
AKETLDLLEKMAETDLENHLRDLLEGCKYLVVVDDVWQKEAWESLKRAFPDRNNGSRVII
TTRNQDVAERANNRGFVHKLRFLKQEESWDLFCRKLLDVRAMVPAMESLAKDMVEKCRGL
PLAIVVLSGLLSHRWGLDKWQNVKDCLWKDIEEDSIEISYILSLSFNDLSAALKKCFLYF
GVFPEDQVIDADDIMRLWMTEGFIIPRGEERMEDVAEGFLNELIRRSLVQVAQTFWEKVT
VCRVHDLLRDLAIQKALEVNFFDIYDPRKNLKSTSCIRHAIHSEGERYLSSLDLSNSKLR
SIMFFDPHICNVFQHIDVFRHIYVLYLDIDYGKVIPDAIGSLYNLKLLRLSVVSKIPSSI
GNLKNLQTLVVVNMDRRFCQLPPETADLINLRHLVVPYSIPLAGISKLTSLQVLRLDCDQ
WKEVDPVDLVNLRELEMRNIYKSYSLNNISSLKNLNTLKLCILLGPQSTYPFPSLEFVNS
CEKLQKLLLGGRLEKLPVFPDSITMIFLWESRLTKDPMPILGMLPNLRNLELEAAYEGEE
IMCSDYSFSQLELLHLYGLDNLERWHLGTNAMPLIKDLVIHHCPKLREIPERMKDVKHFK
RI*

Transcript Sequence

Transcript ID

PGSC0003DMT400030011
Transcript Infomation

pacid=37472979 locus=PGSC0003DMG400011517 ID=PGSC0003DMT400030011.v4.03 annot-version=v4.03
Sequence

ATGGCTGATGCCGTTGTGTCATTTGCAGTTCAAAAATTGGGTGATTTCCTCATTCAGGAA
GTTAACCTACGTTTAAGTCTAAGAGAGGATATGAAGTGGATGAGAACTGAGCTTCTCTTC
ATGCAGTCTTTCCTCAAAGATACAGAACTAAAACAATATGGAGATCATACAATTCAACAA
TGGGTAACTGAGATGAACTCTATTGCTAATGACGCTGTTGCTATACTCGAGACTTACAGT
TTAGAGGCTGGTAAAGGTGCTAGTCGTCTCAAGGCGTGCGCTTGCATATGTAGGAAGGAG
AAGAAATTCTACAATGTCGCCAAGGAGATTCAATCACTCAAGCAACGAATCATGGATATC
TCTCGTAAAAGAGATACTTATAGTATTACAAATATCAATAGTAATGCTGGAGAAGGAACA
AGTAATCAGGTTACAACACTGAGGAGAACTACCTCATATGTGGATGACCAGGATTACATT
TTTGTTGGACTTCAGGATGTTGTAGAATCATTGCTAGCTGAACTTCTCAAAGCAGAGCCT
CGTCGAAACGTCCTCTCCATTCATGGGATGGGTGGATTGGGCAAGACCACTCTTGCCAGA
AACCTCTACAACAGTCCTAATATAGTCTCAAGCTTCCCTACTCGCACTTGGATATGTGTT
TCTCAAGAGTACAACACAATGGATCTTTTTAAGACTATCATAAAATCCATCCAAGGTTGC
GCCAAGGAAACTCTAGATTTGTTGGAAAAGATGGCAGAAACAGATCTAGAAAATCACCTT
CGTGATCTATTAGAAGGATGCAAATACCTTGTGGTGGTTGATGATGTGTGGCAGAAAGAA
GCATGGGAGAGTTTGAAAAGAGCATTTCCGGATAGAAATAATGGCAGCAGAGTTATTATC
ACCACGCGCAACCAGGATGTCGCTGAAAGAGCAAACAACAGAGGTTTTGTCCATAAACTT
CGTTTCCTAAAACAAGAAGAAAGTTGGGATCTCTTTTGTAGGAAACTACTTGATGTTCGA
GCAATGGTTCCAGCAATGGAAAGTCTAGCTAAGGATATGGTGGAAAAATGTAGAGGCTTA
CCTCTTGCAATTGTTGTATTGAGTGGACTACTTTCGCATAGATGGGGGCTAGACAAATGG
CAAAACGTGAAAGACTGCCTTTGGAAGGACATTGAAGAAGACTCTATTGAAATCTCCTAC
ATACTATCATTAAGCTTCAACGATTTGTCAGCTGCGCTCAAGAAGTGTTTTCTCTACTTT
GGTGTTTTTCCAGAAGATCAAGTGATCGATGCTGACGACATAATGCGGTTGTGGATGACA
GAGGGTTTCATCATACCAAGAGGAGAAGAAAGAATGGAGGATGTCGCTGAAGGCTTCTTG
AATGAGCTGATAAGACGAAGCTTGGTTCAAGTAGCTCAAACATTTTGGGAAAAAGTTACT
GTATGTAGGGTTCATGATTTACTTCGTGATCTTGCCATACAAAAGGCATTGGAGGTAAAC
TTCTTTGACATTTATGATCCAAGAAAGAACTTGAAATCCACTTCATGTATAAGACATGCC
ATTCATAGTGAAGGAGAAAGGTACCTCTCATCACTTGATCTTTCTAACTCGAAGTTGAGG
TCAATTATGTTCTTTGATCCACATATTTGTAATGTGTTCCAACATATAGATGTGTTCCGA
CATATATATGTGTTGTACTTGGATATTGATTATGGTAAAGTTATACCTGATGCCATAGGG
AGTTTGTACAACCTCAAGTTGTTACGCTTGAGTGTTGTCAGTAAAATTCCCTCCTCCATC
GGCAACCTCAAGAATCTACAGACACTTGTTGTTGTCAATATGGACAGACGCTTTTGCCAA
CTACCCCCCGAAACAGCTGACCTAATAAATTTAAGACATTTAGTTGTTCCATATTCTATA
CCTCTGGCAGGTATAAGCAAACTCACTAGTCTTCAAGTTCTTCGCCTTGATTGTGATCAG
TGGAAAGAAGTTGACCCAGTTGATTTAGTCAATCTTCGAGAATTAGAGATGCGTAATATA
TACAAATCTTACTCCCTAAACAACATTAGCAGCTTGAAAAACCTTAACACTCTCAAATTG
TGTATTTTGCTTGGTCCACAATCTACATATCCATTCCCATCCCTTGAATTTGTTAATAGT
TGTGAAAAGCTCCAGAAATTGTTGTTAGGTGGGAGATTAGAGAAACTGCCTGTGTTTCCA
GATTCCATCACAATGATATTTCTTTGGGAGTCAAGACTGACAAAAGATCCGATGCCTATT
TTGGGAATGTTACCAAACCTAAGGAATCTCGAATTAGAAGCAGCTTATGAAGGAGAAGAA
ATAATGTGCAGTGATTACAGCTTCAGTCAACTAGAGCTCCTTCATCTTTATGGTCTTGAC
AACTTAGAAAGATGGCATTTAGGCACAAATGCCATGCCTCTCATTAAAGATCTTGTTATC
CATCATTGTCCAAAGCTGAGGGAGATTCCAGAGAGAATGAAAGACGTGAAGCATTTCAAA
CGTATATGA