Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029881
CDS Infomation

pacid=37475409 polypeptide=PGSC0003DMP400020324 locus=PGSC0003DMG400011482 ID=PGSC0003DMT400029881.v4.03 annot-version=v4.03
Sequence

ATGACAAGAATTGTAGCTCAAAATGTATCACCAGTAAGAGATTGCGTACCTCTTTATGAT
CGGAGACAAATGTTAGAAATGTCGTCGCCGACGTTTGCTCAGTTGTTGAACAACGTCGGA
GATCATGTCACCGGGGACGAAACTGAAACTTCAGTTCACCAAGTTCTGACAATGGAACTT
CCGGTGCAGCAATCAATTCCATTTGTATTGTCGTTCAGTAACCTGACGTACAGCGTGAGA
GTCCGCCGGAAAAGTATTTTTCCGGCGATCTCCGGCCGCCGGGCAGATGAACCGCGGAGC
ACGAGGACGAAGGTGCTTTTGAATGATATATCAGGAGAGGCGCGTGACGGAGAACTACTC
GCGGTGCTCGGCGCGTCTGGTTCGGGGAAATCGACGTTGATCGATGCTTTAGCTAATCGA
ATTGCGAAGGAGAGCTTGAAAGGGGAGGTGAAATTGAACGGTGAGCCATTGCATTCGAAG
TTGCTGAAAGTGATATCAGCGTACGTAATGCAAGATGATCTCCTTTATCCGATGCTTACC
GTGGAAGAAACGTTGATGTTCTCAGCAGAGTTTCGGCTTCCACGAACTCTATCGAAATCG
AAGAAGAAAGGTAGAGTTCAAGCTTTAATCGATCAATTAGGACTCCGAAATGCAGCCAAA
ACTATAATCGGCGATGAAGGCCACCGAGGAGTCTCCGGAGGTGAAAGACGGAGAGTTTCA
ATCGGAATCGACATCATCCATGACCCAATCATTTTATTCCTCGATGAACCTACTTCCGGT
CTCGATTCCACCAGTGCTTTCATGGTGGTTAAAGTTCTTCAGCGAATCGCACAGAGCGGA
AGTATTGTGATAATGTCGATTCATCAACCAAGTTATCGAATTCTCGGCTTACTTGATCGA
TTGATCTTCTTATCACGCGGACAAACAGTTTACAGTGGTTCGCCATTGAATTTGCCCCAA
TTTTTCGCGGATTTTGGTCATTCAATTCCGGAAAACGAGAACAAAACAGAGTTCGCGCTT
GATTTAATCCGCGAACTCGAAGGTTCACCTGATGGAACAGATAATTTAGTTGAATTCAAC
AGAAAATGGAAAAATACTAATCGGAATTCTGCAGCAACGCCGGCGAGATATGATTTGTCA
TTAAAGGAAGCAATAAGTGCAAGCATTTCTAGAGGGAAATTGGTTTCTGGTGCAGCGAAT
GATGCTGCTAATCCTACTTCTATGGTTCCTACTTTTGCAAATCCAATATGGACCGAAATG
GCAGTACTGTCAAAGCGGTCATTCACAAACTCATGGCGTATGCCGGAGATTTTCTTCGTC
CGTTTCGGTGCAGTAATGGTCACGGGTTTCATCCTCGCCACCATGTTCTGGCGGCTCGAC
GATTCCCCTAAAGGTGTAAGGGAACGGATTGGGTTTTTCGCGTTCGCCATGTCAACAACT
TACTATACATGCGCGGACGCATTGCCCGTTTTCATTCATGAGAGGTTCATTTTCATGAGG
GAAACGGCTTACAATGCTTATCGGAGATCGTCTTATTGTCTCTCTCACGCTTTGGTTTCG
ATACCAGCATTGATATTCCTCTCTATATCGTTCGCAGCCCTGACTTTCTGGGCTGTTGGC
CTAGACGGTGGAGCTTCGGGCTTTCTGTTCTATTTATCTGTCGTCCTTGCTTCGTTTTGG
GCTGGTAATTCATTCGTCACGTTCCTCTCTGGTGTCATTCCTCATGTCATGATCGGATAT
GTAATCGTTGTAGCAATTTTCGCGTATTACCTCCTCTTCAGTGGTTTCTTCTTGAATCGT
GATAGGATCCCGTCTTACTGGATATGGTTTCATTACCTCTCGCTCGTGAAATACCCATAT
GAAGCAGTGTTGCAGAACGAATTCAAAGACCCCACGAAATGCTTCGTTCGTGGGATTCAA
TTGTTTGATAACAGCCCACTTGGGGATATTTCTATTTCGTTGAAGGAGAAACTGTTGGAC
AGTATAAGCAAAACGTTGAACGTCAGGATAACAAGTTCCACATGTGTGATGACTGGTGCA
GATATATTGGTGCAACAAGGGATAACTCAATTGAACAAATGGAATTGCTTGTGGGTAACA
ATTGCATGGGGATTTTTCTTTAGGATTTTGTTTTATTTCTCTTTGTTATTGGGAAGTAAA
AACAAAAGAAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400020324
PEP Infomation

pacid=37475409 transcript=PGSC0003DMT400029881 locus=PGSC0003DMG400011482 ID=PGSC0003DMT400029881.v4.03 annot-version=v4.03
Sequence

MTRIVAQNVSPVRDCVPLYDRRQMLEMSSPTFAQLLNNVGDHVTGDETETSVHQVLTMEL
PVQQSIPFVLSFSNLTYSVRVRRKSIFPAISGRRADEPRSTRTKVLLNDISGEARDGELL
AVLGASGSGKSTLIDALANRIAKESLKGEVKLNGEPLHSKLLKVISAYVMQDDLLYPMLT
VEETLMFSAEFRLPRTLSKSKKKGRVQALIDQLGLRNAAKTIIGDEGHRGVSGGERRRVS
IGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDR
LIFLSRGQTVYSGSPLNLPQFFADFGHSIPENENKTEFALDLIRELEGSPDGTDNLVEFN
RKWKNTNRNSAATPARYDLSLKEAISASISRGKLVSGAANDAANPTSMVPTFANPIWTEM
AVLSKRSFTNSWRMPEIFFVRFGAVMVTGFILATMFWRLDDSPKGVRERIGFFAFAMSTT
YYTCADALPVFIHERFIFMRETAYNAYRRSSYCLSHALVSIPALIFLSISFAALTFWAVG
LDGGASGFLFYLSVVLASFWAGNSFVTFLSGVIPHVMIGYVIVVAIFAYYLLFSGFFLNR
DRIPSYWIWFHYLSLVKYPYEAVLQNEFKDPTKCFVRGIQLFDNSPLGDISISLKEKLLD
SISKTLNVRITSSTCVMTGADILVQQGITQLNKWNCLWVTIAWGFFFRILFYFSLLLGSK
NKRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400029881
Transcript Infomation

pacid=37475409 locus=PGSC0003DMG400011482 ID=PGSC0003DMT400029881.v4.03 annot-version=v4.03
Sequence

ATGACAAGAATTGTAGCTCAAAATGTATCACCAGTAAGAGATTGCGTACCTCTTTATGAT
CGGAGACAAATGTTAGAAATGTCGTCGCCGACGTTTGCTCAGTTGTTGAACAACGTCGGA
GATCATGTCACCGGGGACGAAACTGAAACTTCAGTTCACCAAGTTCTGACAATGGAACTT
CCGGTGCAGCAATCAATTCCATTTGTATTGTCGTTCAGTAACCTGACGTACAGCGTGAGA
GTCCGCCGGAAAAGTATTTTTCCGGCGATCTCCGGCCGCCGGGCAGATGAACCGCGGAGC
ACGAGGACGAAGGTGCTTTTGAATGATATATCAGGAGAGGCGCGTGACGGAGAACTACTC
GCGGTGCTCGGCGCGTCTGGTTCGGGGAAATCGACGTTGATCGATGCTTTAGCTAATCGA
ATTGCGAAGGAGAGCTTGAAAGGGGAGGTGAAATTGAACGGTGAGCCATTGCATTCGAAG
TTGCTGAAAGTGATATCAGCGTACGTAATGCAAGATGATCTCCTTTATCCGATGCTTACC
GTGGAAGAAACGTTGATGTTCTCAGCAGAGTTTCGGCTTCCACGAACTCTATCGAAATCG
AAGAAGAAAGGTAGAGTTCAAGCTTTAATCGATCAATTAGGACTCCGAAATGCAGCCAAA
ACTATAATCGGCGATGAAGGCCACCGAGGAGTCTCCGGAGGTGAAAGACGGAGAGTTTCA
ATCGGAATCGACATCATCCATGACCCAATCATTTTATTCCTCGATGAACCTACTTCCGGT
CTCGATTCCACCAGTGCTTTCATGGTGGTTAAAGTTCTTCAGCGAATCGCACAGAGCGGA
AGTATTGTGATAATGTCGATTCATCAACCAAGTTATCGAATTCTCGGCTTACTTGATCGA
TTGATCTTCTTATCACGCGGACAAACAGTTTACAGTGGTTCGCCATTGAATTTGCCCCAA
TTTTTCGCGGATTTTGGTCATTCAATTCCGGAAAACGAGAACAAAACAGAGTTCGCGCTT
GATTTAATCCGCGAACTCGAAGGTTCACCTGATGGAACAGATAATTTAGTTGAATTCAAC
AGAAAATGGAAAAATACTAATCGGAATTCTGCAGCAACGCCGGCGAGATATGATTTGTCA
TTAAAGGAAGCAATAAGTGCAAGCATTTCTAGAGGGAAATTGGTTTCTGGTGCAGCGAAT
GATGCTGCTAATCCTACTTCTATGGTTCCTACTTTTGCAAATCCAATATGGACCGAAATG
GCAGTACTGTCAAAGCGGTCATTCACAAACTCATGGCGTATGCCGGAGATTTTCTTCGTC
CGTTTCGGTGCAGTAATGGTCACGGGTTTCATCCTCGCCACCATGTTCTGGCGGCTCGAC
GATTCCCCTAAAGGTGTAAGGGAACGGATTGGGTTTTTCGCGTTCGCCATGTCAACAACT
TACTATACATGCGCGGACGCATTGCCCGTTTTCATTCATGAGAGGTTCATTTTCATGAGG
GAAACGGCTTACAATGCTTATCGGAGATCGTCTTATTGTCTCTCTCACGCTTTGGTTTCG
ATACCAGCATTGATATTCCTCTCTATATCGTTCGCAGCCCTGACTTTCTGGGCTGTTGGC
CTAGACGGTGGAGCTTCGGGCTTTCTGTTCTATTTATCTGTCGTCCTTGCTTCGTTTTGG
GCTGGTAATTCATTCGTCACGTTCCTCTCTGGTGTCATTCCTCATGTCATGATCGGATAT
GTAATCGTTGTAGCAATTTTCGCGTATTACCTCCTCTTCAGTGGTTTCTTCTTGAATCGT
GATAGGATCCCGTCTTACTGGATATGGTTTCATTACCTCTCGCTCGTGAAATACCCATAT
GAAGCAGTGTTGCAGAACGAATTCAAAGACCCCACGAAATGCTTCGTTCGTGGGATTCAA
TTGTTTGATAACAGCCCACTTGGGGATATTTCTATTTCGTTGAAGGAGAAACTGTTGGAC
AGTATAAGCAAAACGTTGAACGTCAGGATAACAAGTTCCACATGTGTGATGACTGGTGCA
GATATATTGGTGCAACAAGGGATAACTCAATTGAACAAATGGAATTGCTTGTGGGTAACA
ATTGCATGGGGATTTTTCTTTAGGATTTTGTTTTATTTCTCTTTGTTATTGGGAAGTAAA
AACAAAAGAAGGTAA