Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029795
CDS Infomation

pacid=37479227 polypeptide=PGSC0003DMP400020279 locus=PGSC0003DMG400011448 ID=PGSC0003DMT400029795.v4.03 annot-version=v4.03
Sequence

ATGCTGAGTGTGTTACGGGTGCATCTCCCGTCCGATATACCGATCGTAGGCTGTGAACTC
ACGCCTTATGTCCTCTTACGACGGCCAAACAAGGATAAGTCTGTTATTTCTGAGGATGTT
TCAGAGTCTGCACCGATTGATGGATATTTCTTGAGATACAAGTGGTATCGTATACAAAGT
GATAAAAAAGTTGCCATCTGTAGTATCCATCCATCTGAGCAAGCCACATTGCAGTGCCTT
GGGTGTGTGAAGGCCAAAATCCCAGTCACTAAGAGTTACCATTGCTCACCTAAATGCTTC
TCAGATGCATGGCAACATCATCGTGTTCTGCATGAACGTGCTGCTAGTGCTGTAAATGAA
AATGGAAACGAGGAGGAAGAAATATTTGGGCGATTTAATAGTACTGGGTCTGGTGTTACT
AATGCAAGTTTGGCTTCTTCTCAATCAAGTGGCAGCTTGGCGAATGGAACCACACCTTTA
TATCCTGCAGCAATAACCCAGAGAAATGGCAGTGAAACCTGGTTTGAAGTTGGACGGGCT
AAAACATATACGCCATCTGCAGATGATATTGGTCACGCGCTTAAATTTGAATGTGTTGTT
GTAGATGCAGAAACAAAATTACCTGTTGGACCTTCTAGTACCATATTGACGTCCCGAGTT
ATTCCAGCTCCGTGTCCAACTCCACGTCGCATGTTTTCAGTTAGCGGAGTTGATATTCCT
GGACATCTGGATTTGGATGGTCGATTATCTTCTTCAGGAACTTTCACTGTGCTCTCCTAC
AATATTCTGTCTGATGCCTATGCAACAAACGAATTATACAGTTATTGCCCCTCTTGGTCT
CTTTCTTGGACATATCGTAGACAGAATCTTTTGCGCGAAATAGTTGGCTACCGTGCAGAC
ATTGTTTGTCTTCAAGAGGTTCAAAGTAATCATTTTGAGGAGTTCTTTGCTCCTGAGCTG
GATAAACACGGTTACCAAGCTCTGTTTAAAAGAAAAACAGCTGAGGTGTTTAGTGGGAGT
ATTAACAATATTGATGGTTGTGCTACATTTTTCCGCCGAGATAGATTCTCACATGTTAAA
AAATATGAGGTCGAGTTTAATAAAGCTGCACAATCTTTGACTGATGCTGTGGTTCCCATT
GCCCAAAAGAAGACTGCATTAAATCGTTTGGTTAAGGATAATGTTGCACTTATAGTGGTT
TTGGAAGCGAAGTTCAGCAACCAGGGGGTTGACAACCCTGGGAAGCGTCAACTAGTTTGT
GTGGCCAACACACATGTAAACGTTCAGCAAGAATTAAGGGATGTCAAACTGTGGCAGGTT
CACACACTTCTTAAAGGACTTGAAAAAATCGCTGCCAGTGCTGACATCCCAATGCTTGTC
TGTGGGGATTTTAATTCGATGCCCGGAAGTGCTCCTCATACACTTCTTGCTTTGGGGAAA
GTTGATCCAATGCATCAAGATCTAGTAGTGGATCCTCTTGGTATTTTGCGTCCAGCTTCA
AAGTTAACACACCAGCTCCCATTGGTTAGTGCTTATTCATCCTTTGCCAGAATGGGGGTG
GGACTTGGACTAGAGCAGCAAAGGAGGAGGATGGATCCTAATACCAATGAGCCCTTGTTT
ACCAACTGCACGAGAGATTTTATTGGCACTCATGATTATATATTCTACTCAGCTGATTCA
TTAACTGTTGAATCTTTATTGGAGCTCTTGGATGAAGAAAGCTTGAGAAAAGACACAGCA
CTTCCCTCTCCAGAGTGGTCCTCTGATCATATAGCACTCTTAGCTGAGTTCCGGTGCAAG
CCGAGAACTAGACGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400020279
PEP Infomation

pacid=37479227 transcript=PGSC0003DMT400029795 locus=PGSC0003DMG400011448 ID=PGSC0003DMT400029795.v4.03 annot-version=v4.03
Sequence

MLSVLRVHLPSDIPIVGCELTPYVLLRRPNKDKSVISEDVSESAPIDGYFLRYKWYRIQS
DKKVAICSIHPSEQATLQCLGCVKAKIPVTKSYHCSPKCFSDAWQHHRVLHERAASAVNE
NGNEEEEIFGRFNSTGSGVTNASLASSQSSGSLANGTTPLYPAAITQRNGSETWFEVGRA
KTYTPSADDIGHALKFECVVVDAETKLPVGPSSTILTSRVIPAPCPTPRRMFSVSGVDIP
GHLDLDGRLSSSGTFTVLSYNILSDAYATNELYSYCPSWSLSWTYRRQNLLREIVGYRAD
IVCLQEVQSNHFEEFFAPELDKHGYQALFKRKTAEVFSGSINNIDGCATFFRRDRFSHVK
KYEVEFNKAAQSLTDAVVPIAQKKTALNRLVKDNVALIVVLEAKFSNQGVDNPGKRQLVC
VANTHVNVQQELRDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSMPGSAPHTLLALGK
VDPMHQDLVVDPLGILRPASKLTHQLPLVSAYSSFARMGVGLGLEQQRRRMDPNTNEPLF
TNCTRDFIGTHDYIFYSADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCK
PRTRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400029795
Transcript Infomation

pacid=37479227 locus=PGSC0003DMG400011448 ID=PGSC0003DMT400029795.v4.03 annot-version=v4.03
Sequence

ATGCTGAGTGTGTTACGGGTGCATCTCCCGTCCGATATACCGATCGTAGGCTGTGAACTC
ACGCCTTATGTCCTCTTACGACGGCCAAACAAGGATAAGTCTGTTATTTCTGAGGATGTT
TCAGAGTCTGCACCGATTGATGGATATTTCTTGAGATACAAGTGGTATCGTATACAAAGT
GATAAAAAAGTTGCCATCTGTAGTATCCATCCATCTGAGCAAGCCACATTGCAGTGCCTT
GGGTGTGTGAAGGCCAAAATCCCAGTCACTAAGAGTTACCATTGCTCACCTAAATGCTTC
TCAGATGCATGGCAACATCATCGTGTTCTGCATGAACGTGCTGCTAGTGCTGTAAATGAA
AATGGAAACGAGGAGGAAGAAATATTTGGGCGATTTAATAGTACTGGGTCTGGTGTTACT
AATGCAAGTTTGGCTTCTTCTCAATCAAGTGGCAGCTTGGCGAATGGAACCACACCTTTA
TATCCTGCAGCAATAACCCAGAGAAATGGCAGTGAAACCTGGTTTGAAGTTGGACGGGCT
AAAACATATACGCCATCTGCAGATGATATTGGTCACGCGCTTAAATTTGAATGTGTTGTT
GTAGATGCAGAAACAAAATTACCTGTTGGACCTTCTAGTACCATATTGACGTCCCGAGTT
ATTCCAGCTCCGTGTCCAACTCCACGTCGCATGTTTTCAGTTAGCGGAGTTGATATTCCT
GGACATCTGGATTTGGATGGTCGATTATCTTCTTCAGGAACTTTCACTGTGCTCTCCTAC
AATATTCTGTCTGATGCCTATGCAACAAACGAATTATACAGTTATTGCCCCTCTTGGTCT
CTTTCTTGGACATATCGTAGACAGAATCTTTTGCGCGAAATAGTTGGCTACCGTGCAGAC
ATTGTTTGTCTTCAAGAGGTTCAAAGTAATCATTTTGAGGAGTTCTTTGCTCCTGAGCTG
GATAAACACGGTTACCAAGCTCTGTTTAAAAGAAAAACAGCTGAGGTGTTTAGTGGGAGT
ATTAACAATATTGATGGTTGTGCTACATTTTTCCGCCGAGATAGATTCTCACATGTTAAA
AAATATGAGGTCGAGTTTAATAAAGCTGCACAATCTTTGACTGATGCTGTGGTTCCCATT
GCCCAAAAGAAGACTGCATTAAATCGTTTGGTTAAGGATAATGTTGCACTTATAGTGGTT
TTGGAAGCGAAGTTCAGCAACCAGGGGGTTGACAACCCTGGGAAGCGTCAACTAGTTTGT
GTGGCCAACACACATGTAAACGTTCAGCAAGAATTAAGGGATGTCAAACTGTGGCAGGTT
CACACACTTCTTAAAGGACTTGAAAAAATCGCTGCCAGTGCTGACATCCCAATGCTTGTC
TGTGGGGATTTTAATTCGATGCCCGGAAGTGCTCCTCATACACTTCTTGCTTTGGGGAAA
GTTGATCCAATGCATCAAGATCTAGTAGTGGATCCTCTTGGTATTTTGCGTCCAGCTTCA
AAGTTAACACACCAGCTCCCATTGGTTAGTGCTTATTCATCCTTTGCCAGAATGGGGGTG
GGACTTGGACTAGAGCAGCAAAGGAGGAGGATGGATCCTAATACCAATGAGCCCTTGTTT
ACCAACTGCACGAGAGATTTTATTGGCACTCATGATTATATATTCTACTCAGCTGATTCA
TTAACTGTTGAATCTTTATTGGAGCTCTTGGATGAAGAAAGCTTGAGAAAAGACACAGCA
CTTCCCTCTCCAGAGTGGTCCTCTGATCATATAGCACTCTTAGCTGAGTTCCGGTGCAAG
CCGAGAACTAGACGCTGA