Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029791
CDS Infomation

pacid=37477269 polypeptide=PGSC0003DMP400020276 locus=PGSC0003DMG400011446 ID=PGSC0003DMT400029791.v4.03 annot-version=v4.03
Sequence

ATGGCTGATACAGCAAAATATACACCAATTAATGGTGGAAAAACTCTGATTACAGACCTG
AAAACTCACTTCTCTTTTCTTAAAACCAAAAGAACTGTTACTTGTGCATATGGGTTCATG
TTTGTTTTCATTCTTGTTACTTTTTTCTTGGCTTTTAGTCCTTCACCCAACTCTTCTTCT
CCTTGGTTCACAAATATCTTCTCTTTAAGCAGTAGTAGTACTAGTACTAGTAGTGGAAGT
ACTTTTTCTGATGAATCTTCTAGATCTCACTTCTCTTCAGTTTATTCTTACTTTTTCCCC
AATTCCTCACAGCAACTTCAAAATTTCACTAACCCCAGATCCCAAAACTCCAATTTTGAG
CCTCTGAACAATGATTCAGATGATAAAGGTGAAGTCTTGGAAACTCCCTTGAAGCCTTCT
GTGAATGTGTCAGCAGTAGCACCAGTATCTTCATCTGGGTTGAATCAAGAATCATCAAGT
GTGAAGGATCAGTCTAAAAGTAAGGATTTTGATGATAAAAACGGAGTCTTGAAAAACCCC
TTGAAGCCATCTGTGAATGTGTCAGCAGTAGGATCAATATCCCCATCTGGGTTAGATCAA
GAATCATCAAGTGTGAAGAATCAGTCAAAAAGTAAGGATTTTGATGATAAAAATGGAGTC
TTGGAAAGCCCCTCAATGCCTTCTGTGAATGTGTCAGCAGTAGCATCAAAATCCTCTTCT
GGGTTGAATCAAGAATCATCAAGTGTAAAGAATCAGCCTAAAAGTAAAGATTTTGGTGAT
AAAGTTGGAAACTTGAAGGCAAATCAGAGTAAAAATCCATTGGAAAAGTCACCAGCAAGT
GTCAATCAGACAGCAAAATCTGGTAGTGGGAGTAGAGAGAAGGAAATTGCAGAAAAGGGA
GTGAAGGGTAATTTCACTTCCTCATTTGTGAAAAGCCAGAGTGATGGTACAAATTTAGAT
GTGTCTACAAAGAAGAAGAAGGATGAAGATTTGGTTAAGTCGTTGCTGAGTTGTGATTTT
TTTGATGGGAATTGGGTGAAAGATGAGTCTTATCCTTTGTATAAACCTGGTTCTTGTTCT
TTGATTGATGAACAATTTAACTGTTTTCTCAATGGTAGACCTGATAATAATCACATGAAG
ATGAAATGGAAGCCCAATGCTTGTTCTCTTCCAAGATTGAATGGAACTCATATGCTGGAA
TTATTGAGAGGAAAGCGATTAGTATTTGTCGGTGATTCGCTCAATAGGAATATGTGGGAA
TCCCTTGTTTGCATTCTTAGAAACTCTGTCAAAGATCAGAAAAAAGTTTATGAAGAATCT
GGCAGACAACATTTTAGGACCGAGGCTTCATATTCATTTCTATTTGAGGAGTATAATTTC
AGAGTGGAGTTTTTTGTATCTCCATTCTTGGTTCAAGAATGGGAATATGCAGATAAAAAA
GGAACGAAGAAGGAAACACTTCGACTTGATTTAATCGGACAGTCTGCTGATAAATATAAA
AATGCAGATATCTTAATCTTCAACACCGGCCACTGGTGGACACACGAGAAAACTTCGTTG
GGGAAGGACTATTATCAAGAAGGAAGTCATGTGTACAACGAATTAGATGTTCTTGAGGCA
TTTCGAAAAGCTTTAACAACATGGGGAAGATGGGTTGATTCCCATGTAAATCCTAAGAAA
ACATTTGTTCTCTTCAGAGGTTATTCCGCGTCTCATTTTAGCGGCGGACAATGGAATTCA
GGTGGAGCTTGTGACCATGAAACAGAACCAATCAAGAACACAACATATCTAACACCATAT
CCATCAAAGATGAATGTATTAGAAAGAGTTTTAAAAGGGATGAAAACTCAAGTCTCATAT
CTCAATATCACAAGAATGACAGATTTTCGAAAAGATGGTCATCCATCAGTATATAGGAAA
CAAAAATTTACAGTTGAAGAGAAGAAAACACCATTGTTGTTTCAAGATTGTAGTCATTGG
TGTCTCCCTGGTGTGCCTGATGCTTGGAATGAGTTGCTATATGCCAAGATTTTAGTAAAT
CAACATCAAAAACAACAAGACGACAAGAAGTCGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400020276
PEP Infomation

pacid=37477269 transcript=PGSC0003DMT400029791 locus=PGSC0003DMG400011446 ID=PGSC0003DMT400029791.v4.03 annot-version=v4.03
Sequence

MADTAKYTPINGGKTLITDLKTHFSFLKTKRTVTCAYGFMFVFILVTFFLAFSPSPNSSS
PWFTNIFSLSSSSTSTSSGSTFSDESSRSHFSSVYSYFFPNSSQQLQNFTNPRSQNSNFE
PLNNDSDDKGEVLETPLKPSVNVSAVAPVSSSGLNQESSSVKDQSKSKDFDDKNGVLKNP
LKPSVNVSAVGSISPSGLDQESSSVKNQSKSKDFDDKNGVLESPSMPSVNVSAVASKSSS
GLNQESSSVKNQPKSKDFGDKVGNLKANQSKNPLEKSPASVNQTAKSGSGSREKEIAEKG
VKGNFTSSFVKSQSDGTNLDVSTKKKKDEDLVKSLLSCDFFDGNWVKDESYPLYKPGSCS
LIDEQFNCFLNGRPDNNHMKMKWKPNACSLPRLNGTHMLELLRGKRLVFVGDSLNRNMWE
SLVCILRNSVKDQKKVYEESGRQHFRTEASYSFLFEEYNFRVEFFVSPFLVQEWEYADKK
GTKKETLRLDLIGQSADKYKNADILIFNTGHWWTHEKTSLGKDYYQEGSHVYNELDVLEA
FRKALTTWGRWVDSHVNPKKTFVLFRGYSASHFSGGQWNSGGACDHETEPIKNTTYLTPY
PSKMNVLERVLKGMKTQVSYLNITRMTDFRKDGHPSVYRKQKFTVEEKKTPLLFQDCSHW
CLPGVPDAWNELLYAKILVNQHQKQQDDKKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400029791
Transcript Infomation

pacid=37477269 locus=PGSC0003DMG400011446 ID=PGSC0003DMT400029791.v4.03 annot-version=v4.03
Sequence

ATGGCTGATACAGCAAAATATACACCAATTAATGGTGGAAAAACTCTGATTACAGACCTG
AAAACTCACTTCTCTTTTCTTAAAACCAAAAGAACTGTTACTTGTGCATATGGGTTCATG
TTTGTTTTCATTCTTGTTACTTTTTTCTTGGCTTTTAGTCCTTCACCCAACTCTTCTTCT
CCTTGGTTCACAAATATCTTCTCTTTAAGCAGTAGTAGTACTAGTACTAGTAGTGGAAGT
ACTTTTTCTGATGAATCTTCTAGATCTCACTTCTCTTCAGTTTATTCTTACTTTTTCCCC
AATTCCTCACAGCAACTTCAAAATTTCACTAACCCCAGATCCCAAAACTCCAATTTTGAG
CCTCTGAACAATGATTCAGATGATAAAGGTGAAGTCTTGGAAACTCCCTTGAAGCCTTCT
GTGAATGTGTCAGCAGTAGCACCAGTATCTTCATCTGGGTTGAATCAAGAATCATCAAGT
GTGAAGGATCAGTCTAAAAGTAAGGATTTTGATGATAAAAACGGAGTCTTGAAAAACCCC
TTGAAGCCATCTGTGAATGTGTCAGCAGTAGGATCAATATCCCCATCTGGGTTAGATCAA
GAATCATCAAGTGTGAAGAATCAGTCAAAAAGTAAGGATTTTGATGATAAAAATGGAGTC
TTGGAAAGCCCCTCAATGCCTTCTGTGAATGTGTCAGCAGTAGCATCAAAATCCTCTTCT
GGGTTGAATCAAGAATCATCAAGTGTAAAGAATCAGCCTAAAAGTAAAGATTTTGGTGAT
AAAGTTGGAAACTTGAAGGCAAATCAGAGTAAAAATCCATTGGAAAAGTCACCAGCAAGT
GTCAATCAGACAGCAAAATCTGGTAGTGGGAGTAGAGAGAAGGAAATTGCAGAAAAGGGA
GTGAAGGGTAATTTCACTTCCTCATTTGTGAAAAGCCAGAGTGATGGTACAAATTTAGAT
GTGTCTACAAAGAAGAAGAAGGATGAAGATTTGGTTAAGTCGTTGCTGAGTTGTGATTTT
TTTGATGGGAATTGGGTGAAAGATGAGTCTTATCCTTTGTATAAACCTGGTTCTTGTTCT
TTGATTGATGAACAATTTAACTGTTTTCTCAATGGTAGACCTGATAATAATCACATGAAG
ATGAAATGGAAGCCCAATGCTTGTTCTCTTCCAAGATTGAATGGAACTCATATGCTGGAA
TTATTGAGAGGAAAGCGATTAGTATTTGTCGGTGATTCGCTCAATAGGAATATGTGGGAA
TCCCTTGTTTGCATTCTTAGAAACTCTGTCAAAGATCAGAAAAAAGTTTATGAAGAATCT
GGCAGACAACATTTTAGGACCGAGGCTTCATATTCATTTCTATTTGAGGAGTATAATTTC
AGAGTGGAGTTTTTTGTATCTCCATTCTTGGTTCAAGAATGGGAATATGCAGATAAAAAA
GGAACGAAGAAGGAAACACTTCGACTTGATTTAATCGGACAGTCTGCTGATAAATATAAA
AATGCAGATATCTTAATCTTCAACACCGGCCACTGGTGGACACACGAGAAAACTTCGTTG
GGGAAGGACTATTATCAAGAAGGAAGTCATGTGTACAACGAATTAGATGTTCTTGAGGCA
TTTCGAAAAGCTTTAACAACATGGGGAAGATGGGTTGATTCCCATGTAAATCCTAAGAAA
ACATTTGTTCTCTTCAGAGGTTATTCCGCGTCTCATTTTAGCGGCGGACAATGGAATTCA
GGTGGAGCTTGTGACCATGAAACAGAACCAATCAAGAACACAACATATCTAACACCATAT
CCATCAAAGATGAATGTATTAGAAAGAGTTTTAAAAGGGATGAAAACTCAAGTCTCATAT
CTCAATATCACAAGAATGACAGATTTTCGAAAAGATGGTCATCCATCAGTATATAGGAAA
CAAAAATTTACAGTTGAAGAGAAGAAAACACCATTGTTGTTTCAAGATTGTAGTCATTGG
TGTCTCCCTGGTGTGCCTGATGCTTGGAATGAGTTGCTATATGCCAAGATTTTAGTAAAT
CAACATCAAAAACAACAAGACGACAAGAAGTCGTAG