Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029771
CDS Infomation

pacid=37476548 polypeptide=PGSC0003DMP400020269 locus=PGSC0003DMG402011442 ID=PGSC0003DMT400029771.v4.03 annot-version=v4.03
Sequence

ATGGTTTCTTGGCTGGATAGGACTGTAGCAGCTTGTTGCCAACCTTTAGGTCGATATGTC
GGTTTGAGCAGCGGTGAAGATGGTGTTCTGGGAGGTGTAGATTACCCATTGCTATGGTAT
AGAGACCTTGAGAAACATTCATGGTGGGGAGTTCTCTTTGCTGTGGCACAGGCTAATCAA
GTATGTGAAGATTATGGCCACGTTGAACCAGGTCGTGAAGGTACCTTTGTTGGGGTTTAT
GATGGCCATGGTGGCCATGATGCTTCAAGATTTGTCTGTGATAACCTTAGCCGGCATTTA
ATAACGCTTGCTCAAGAAAAGGGAACAATAGATGAAGAAGTCCTTAATAATGCCTTCGCT
GCAACTGAAGACGGCTTCCTTTCTATTGTGGAAAGGGAATTTCATGTTGATCCAACAATT
GCGACAACGGGGTGCTGCTGTCTGGTTGGTGTTATCTGGAAAAGGACATTATATGTTGCT
AACCTGGGGGACTGTAGAGCAGTATTAGGTCATATAGGAAGATTCAATAGGATTGTTGCT
GAGCAATTGACTGATGATCATAATGCCAGGATCAAGGAGGTCAGGGATGAACTGAGAGCT
CTGCACCCAGACGATCCAAACATTGTGCGTCGTGTCAGAAAAACATGGCGTGTTAAAGGC
ATTATACAGGTAACTAGAGCAATTGGAGATGCATCTCTGAAGAAGCCAGAATTTGCTCAT
GGTGTAATGGAACCTTTTAGGCGGCCAGTAGTAAGAGCTGATCCATCTGTCTCTTCAAGA
AACTTACAACCATGCGATAGATTTGTTATATTTGCTTCTGATGGGCTGTGGGATTTCTTA
AGCAATGAAAAGGCTGTACAAATTGTGCATGCCTACCCTAGACAGGGCATAGCTAGAAGA
CTTGTTCTATCAGCCCTGAATGTGGCGGCACATGCAAGAAAGTTGAAGTACGGTGACCTT
ATGAATTATGACAAAGGTGTCAGGAGGGCCTTTCATGATGATATAACAGTCGTGGTCATC
TTTATAGATCACGAGATGCTGAATGACGAATTAACTGTGCCTGGAATGTCAGTTCGAGGA
TTTGTAGACACTCATCGACCATCAGATTTCAATATTGCGCAAGAGGTTGCTACAGAGACT
GAACTCACAGAAACAGTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400020269
PEP Infomation

pacid=37476548 transcript=PGSC0003DMT400029771 locus=PGSC0003DMG402011442 ID=PGSC0003DMT400029771.v4.03 annot-version=v4.03
Sequence

MVSWLDRTVAACCQPLGRYVGLSSGEDGVLGGVDYPLLWYRDLEKHSWWGVLFAVAQANQ
VCEDYGHVEPGREGTFVGVYDGHGGHDASRFVCDNLSRHLITLAQEKGTIDEEVLNNAFA
ATEDGFLSIVEREFHVDPTIATTGCCCLVGVIWKRTLYVANLGDCRAVLGHIGRFNRIVA
EQLTDDHNARIKEVRDELRALHPDDPNIVRRVRKTWRVKGIIQVTRAIGDASLKKPEFAH
GVMEPFRRPVVRADPSVSSRNLQPCDRFVIFASDGLWDFLSNEKAVQIVHAYPRQGIARR
LVLSALNVAAHARKLKYGDLMNYDKGVRRAFHDDITVVVIFIDHEMLNDELTVPGMSVRG
FVDTHRPSDFNIAQEVATETELTETV*

Transcript Sequence

Transcript ID

PGSC0003DMT400029771
Transcript Infomation

pacid=37476548 locus=PGSC0003DMG402011442 ID=PGSC0003DMT400029771.v4.03 annot-version=v4.03
Sequence

ATGGTTTCTTGGCTGGATAGGACTGTAGCAGCTTGTTGCCAACCTTTAGGTCGATATGTC
GGTTTGAGCAGCGGTGAAGATGGTGTTCTGGGAGGTGTAGATTACCCATTGCTATGGTAT
AGAGACCTTGAGAAACATTCATGGTGGGGAGTTCTCTTTGCTGTGGCACAGGCTAATCAA
GTATGTGAAGATTATGGCCACGTTGAACCAGGTCGTGAAGGTACCTTTGTTGGGGTTTAT
GATGGCCATGGTGGCCATGATGCTTCAAGATTTGTCTGTGATAACCTTAGCCGGCATTTA
ATAACGCTTGCTCAAGAAAAGGGAACAATAGATGAAGAAGTCCTTAATAATGCCTTCGCT
GCAACTGAAGACGGCTTCCTTTCTATTGTGGAAAGGGAATTTCATGTTGATCCAACAATT
GCGACAACGGGGTGCTGCTGTCTGGTTGGTGTTATCTGGAAAAGGACATTATATGTTGCT
AACCTGGGGGACTGTAGAGCAGTATTAGGTCATATAGGAAGATTCAATAGGATTGTTGCT
GAGCAATTGACTGATGATCATAATGCCAGGATCAAGGAGGTCAGGGATGAACTGAGAGCT
CTGCACCCAGACGATCCAAACATTGTGCGTCGTGTCAGAAAAACATGGCGTGTTAAAGGC
ATTATACAGGTAACTAGAGCAATTGGAGATGCATCTCTGAAGAAGCCAGAATTTGCTCAT
GGTGTAATGGAACCTTTTAGGCGGCCAGTAGTAAGAGCTGATCCATCTGTCTCTTCAAGA
AACTTACAACCATGCGATAGATTTGTTATATTTGCTTCTGATGGGCTGTGGGATTTCTTA
AGCAATGAAAAGGCTGTACAAATTGTGCATGCCTACCCTAGACAGGGCATAGCTAGAAGA
CTTGTTCTATCAGCCCTGAATGTGGCGGCACATGCAAGAAAGTTGAAGTACGGTGACCTT
ATGAATTATGACAAAGGTGTCAGGAGGGCCTTTCATGATGATATAACAGTCGTGGTCATC
TTTATAGATCACGAGATGCTGAATGACGAATTAACTGTGCCTGGAATGTCAGTTCGAGGA
TTTGTAGACACTCATCGACCATCAGATTTCAATATTGCGCAAGAGGTTGCTACAGAGACT
GAACTCACAGAAACAGTATAA