Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029742
CDS Infomation

pacid=37476960 polypeptide=PGSC0003DMP400020247 locus=PGSC0003DMG400011429 ID=PGSC0003DMT400029742.v4.03 annot-version=v4.03
Sequence

ATGAATGGTTTAGTTGACAAGGAAACTAAGCCCAATATCTGCAGAGGAGGGCAGTCACTG
CAAATGAGTCAGATACTACGATTTCCTTTTGCTGATACCTCAGATAATGAGGGTGCCTTA
AATCATTTCAACCATCGTCATCCATTGTTTCAATCGCACTTTCGACAGAGAGAAAGAATC
CAATGCAGCTTTTGTAACATTGTCATCTCTGGTCGAGGTTATGCCTGCAATAAACATTGT
GATTATTACCTTCATGAGGTGTGTAGTAACTTTCCAAGGGAAATTCAGCATGATTTTCAT
CCTGGATCTGACCACAATCTTATTCTCCGGCCCTTTAAAGCCACAAACCGAGAACAGTTT
CATTGTGCTGCTTGTGGACATGATGATTCTGTTCATTCTCTGTTCCAGTCATACTATGGC
TGCGAGTCGTGCAATTTCAATCTTCATGTTGAATGCGCTTCTATACCCATAACCTTGGAC
CAAAAAGTGAAATATCCGCTTCATCTGTTCCTTTCTTTCCCAATAACCAGTGAGACTGCT
ACTCTCTCCTGCTCAATTTGTACTGAAGTTGTTCCCACTTCTGGATGCTGGCTATTTTAC
AACCATAAGCATGATTACCTCTGTCACGTCAATTGTGCTGCTGTATCAGAATACGGAGTG
GAGAATCATTCCATGGATAGACTACAAAACCGGCTGCAAACTCTGGCAACAACAAACCGC
CCTCCCACAACACTTGAAGGTCAACCATCTGGGAACGTTACACATTTCTCTCACCGCCAT
ACTCTCAAGGAATATAACTCGGACAAGTCCCTGGCATGCAACTTGTGCCGTTCTAAATAC
TTCAAAGGGTACTTTTGTAGTGATTGCAATTACTTTATTGATAGAACTTGCTTCTCGGTT
CCATCTATGATTCAACATATGTCTCATCCGCAACACCCTCTACGGTTAACTTGCTACTTG
GATTATCAAAATGAGAATGTCAATTGCCGGTGCTGCCAGGTTAACAAAGAAAGTAGTCAT
AACAGGGCCTACTATTGCGCTCCATGCAAATTCATTTTGAGTTGCCAGTGTGCTGGAGCT
CCCAAAACCTTGACGCTGGCAAGCAATGTCTCATACAAGCTCTTCTTTGAATTCCCCTTT
AAGCATGAGAATGCAGAGGTCAAGTGCAAAATTTGTTCCGAGAAAGTGGTGATCAAAGAT
GGACTGTTGTACTATAATCTAGAGCGTGATGAAACTTTGCATGTTTCTTGTGCCCTCACA
AACGAATCCAAAAAGAAAATGACCAGTTTAATTCCACGGTTAAATGAAGTGAGGATAACT
GAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400020247
PEP Infomation

pacid=37476960 transcript=PGSC0003DMT400029742 locus=PGSC0003DMG400011429 ID=PGSC0003DMT400029742.v4.03 annot-version=v4.03
Sequence

MNGLVDKETKPNICRGGQSLQMSQILRFPFADTSDNEGALNHFNHRHPLFQSHFRQRERI
QCSFCNIVISGRGYACNKHCDYYLHEVCSNFPREIQHDFHPGSDHNLILRPFKATNREQF
HCAACGHDDSVHSLFQSYYGCESCNFNLHVECASIPITLDQKVKYPLHLFLSFPITSETA
TLSCSICTEVVPTSGCWLFYNHKHDYLCHVNCAAVSEYGVENHSMDRLQNRLQTLATTNR
PPTTLEGQPSGNVTHFSHRHTLKEYNSDKSLACNLCRSKYFKGYFCSDCNYFIDRTCFSV
PSMIQHMSHPQHPLRLTCYLDYQNENVNCRCCQVNKESSHNRAYYCAPCKFILSCQCAGA
PKTLTLASNVSYKLFFEFPFKHENAEVKCKICSEKVVIKDGLLYYNLERDETLHVSCALT
NESKKKMTSLIPRLNEVRITE*

Transcript Sequence

Transcript ID

PGSC0003DMT400029742
Transcript Infomation

pacid=37476960 locus=PGSC0003DMG400011429 ID=PGSC0003DMT400029742.v4.03 annot-version=v4.03
Sequence

ATGAATGGTTTAGTTGACAAGGAAACTAAGCCCAATATCTGCAGAGGAGGGCAGTCACTG
CAAATGAGTCAGATACTACGATTTCCTTTTGCTGATACCTCAGATAATGAGGGTGCCTTA
AATCATTTCAACCATCGTCATCCATTGTTTCAATCGCACTTTCGACAGAGAGAAAGAATC
CAATGCAGCTTTTGTAACATTGTCATCTCTGGTCGAGGTTATGCCTGCAATAAACATTGT
GATTATTACCTTCATGAGGTGTGTAGTAACTTTCCAAGGGAAATTCAGCATGATTTTCAT
CCTGGATCTGACCACAATCTTATTCTCCGGCCCTTTAAAGCCACAAACCGAGAACAGTTT
CATTGTGCTGCTTGTGGACATGATGATTCTGTTCATTCTCTGTTCCAGTCATACTATGGC
TGCGAGTCGTGCAATTTCAATCTTCATGTTGAATGCGCTTCTATACCCATAACCTTGGAC
CAAAAAGTGAAATATCCGCTTCATCTGTTCCTTTCTTTCCCAATAACCAGTGAGACTGCT
ACTCTCTCCTGCTCAATTTGTACTGAAGTTGTTCCCACTTCTGGATGCTGGCTATTTTAC
AACCATAAGCATGATTACCTCTGTCACGTCAATTGTGCTGCTGTATCAGAATACGGAGTG
GAGAATCATTCCATGGATAGACTACAAAACCGGCTGCAAACTCTGGCAACAACAAACCGC
CCTCCCACAACACTTGAAGGTCAACCATCTGGGAACGTTACACATTTCTCTCACCGCCAT
ACTCTCAAGGAATATAACTCGGACAAGTCCCTGGCATGCAACTTGTGCCGTTCTAAATAC
TTCAAAGGGTACTTTTGTAGTGATTGCAATTACTTTATTGATAGAACTTGCTTCTCGGTT
CCATCTATGATTCAACATATGTCTCATCCGCAACACCCTCTACGGTTAACTTGCTACTTG
GATTATCAAAATGAGAATGTCAATTGCCGGTGCTGCCAGGTTAACAAAGAAAGTAGTCAT
AACAGGGCCTACTATTGCGCTCCATGCAAATTCATTTTGAGTTGCCAGTGTGCTGGAGCT
CCCAAAACCTTGACGCTGGCAAGCAATGTCTCATACAAGCTCTTCTTTGAATTCCCCTTT
AAGCATGAGAATGCAGAGGTCAAGTGCAAAATTTGTTCCGAGAAAGTGGTGATCAAAGAT
GGACTGTTGTACTATAATCTAGAGCGTGATGAAACTTTGCATGTTTCTTGTGCCCTCACA
AACGAATCCAAAAAGAAAATGACCAGTTTAATTCCACGGTTAAATGAAGTGAGGATAACT
GAGTAA