Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029685
CDS Infomation

pacid=37479202 polypeptide=PGSC0003DMP400020223 locus=PGSC0003DMG400011415 ID=PGSC0003DMT400029685.v4.03 annot-version=v4.03
Sequence

ATGTCTTGTTTGGCACTTTCTCTGCAACCCACTAATGGACCTGATATCTTACTCCAAACC
CGTGAATGGTTTCCACCATCTCGAGCCCTAATGGCACTTTCAGCTTTTCGCCAGACGCGT
CTTGCATTTTCCAAACAACCACAACAAACTACCGCTGACTCATATCCTTCCGATCCTTCT
ATGTCACTTGGTGATGACCCACTTGCGGCTTCTTCGGGTCAAGTTATTGTTGGGGTTGAA
TCGAGGTATCGGGTTGTGTATCGTCTTGTGAACTCGATTTATGTGCTTGCTATTACTACT
GCTGATGATAATGATAAAGATATGGTTGTTAATAATGTGTTTGAGTGTATTAGTATTGTG
AATCAAGCTGTTTCAGTGGTGGTTACTGCGTGTCGTGGTGTAGATGTGACACCGGAGAAG
TTAGCTAAGAAATACGCGGAGATTTATATGGCGTTGGATATTGTGTTGAGAGGGGTGAGT
AATATTAGGTTGGCAGCTATGTTGGCATCTATGCACGGGGAGAGTATAGCGAAGATGGTG
CATTCAGCTGTTCATACGGAGAATAAGATTAGGGGAGGTGATAGTTGGGTGAATGTGGAG
GCGCATTCGTTGGAACAAGAAGGTGGATTGGAGACATTCTCGAAAGCGTTGTTTGAGTTG
CCTCAGGAAACGTTGGAGGCGGGAGATGAAGTGGCAGCCACGTTGGCGATTACGGGTGGA
GAAAAGGAGGAGGAGAAAATTGAGGAGATTGAGGTGGAGCAGGATCCATTTGCAGCAAGT
GATAAGATTAATCAGCCAGAGTCCTTGATGGGTGGTTTTAAGAAGGACAAGGCTAATGAG
AGTTCAGATGTCGCAAAGGCATTGGCAGGGCTTGACGTGACTACCCTGCCACCTGCTGCA
GCTAGCCAGTCAACTCACATCGGTGTGGAAGGGTTTGAAGGAGAGTATGGAGGGATAGAG
TTTAGTAATGAAGGATCAACACTGCGAGAAGATTTTGAAGGCATCAATGATGCCTGGGGT
GGTGGATTAGATGCTTCTGAGTATGTGGGTACGAAAAAGGTGAAGAAAGATCAGGGTCTT
GGTGGGCTTGAATTACTGGCGACTAGTGAACCACCAAAAGCTGCAGCTGGAGCCACTGCT
GAGGGTGCTGGGAAGAATCTTGAGGATATTTTGGTGAAGAAAATGAATGGTCCAGAAATG
TTTATTACTGAGGAGATCAGTGCCGAGTTCAGAGAATCATTGCTTGCTAGAGTTGGTTTG
ATGGGCATTGTTTACTTAAGAACCCTGCCGCCAAAGTCTTCCGATGATAACGAAACTGAG
TTTTCTTTCAAGGTTGAAGACACTGCTGCTGTTAAAAGGTTTGTCATGCAAAATTCTCGT
GTGAGCAGCCTTGGGAATGGTCTGTTTCATGTGAAGACAGCACCATCAAATGAGCCTATA
CCAATTATCAAGTACAGTTTGCTACCACGTTTAACTCCGCTGCCTTTGAGGATTCGACTT
GTTAAGCGTCTTAGTGGGACATTACTTTCTGTAATGCTGCAGTACGTTGCAAATCCTGAT
ATTCCAGTTCCATTAACCAATGTGACCTTTGTCTTGAAATTGCCAGTGGACCCAACATTA
TTGAAAGTTTCACCTAAAGCTGTGTTGAACCGCTCTGAGAGAGAACTGAAATGGCATGTT
GATGAGATTCCGCTCAAGGGTCATCCTGGCAAATTGAAGGCGAGGTTCCCCATTGATATT
AATGATGATGATGAGGCGGTAGAGCTAGAGCTTTTTGGTTATGTAAAGTTTTCATCCCAA
GGAACTAGATCTTTGTCTGGCATTTCTCTGCAGCCGGCTTTAGAGGGCAAGACTGATTTT
TATGAGGTTGATCACAGGTATTCAAGTGGAGTTTACACATGCAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400020223
PEP Infomation

pacid=37479202 transcript=PGSC0003DMT400029685 locus=PGSC0003DMG400011415 ID=PGSC0003DMT400029685.v4.03 annot-version=v4.03
Sequence

MSCLALSLQPTNGPDILLQTREWFPPSRALMALSAFRQTRLAFSKQPQQTTADSYPSDPS
MSLGDDPLAASSGQVIVGVESRYRVVYRLVNSIYVLAITTADDNDKDMVVNNVFECISIV
NQAVSVVVTACRGVDVTPEKLAKKYAEIYMALDIVLRGVSNIRLAAMLASMHGESIAKMV
HSAVHTENKIRGGDSWVNVEAHSLEQEGGLETFSKALFELPQETLEAGDEVAATLAITGG
EKEEEKIEEIEVEQDPFAASDKINQPESLMGGFKKDKANESSDVAKALAGLDVTTLPPAA
ASQSTHIGVEGFEGEYGGIEFSNEGSTLREDFEGINDAWGGGLDASEYVGTKKVKKDQGL
GGLELLATSEPPKAAAGATAEGAGKNLEDILVKKMNGPEMFITEEISAEFRESLLARVGL
MGIVYLRTLPPKSSDDNETEFSFKVEDTAAVKRFVMQNSRVSSLGNGLFHVKTAPSNEPI
PIIKYSLLPRLTPLPLRIRLVKRLSGTLLSVMLQYVANPDIPVPLTNVTFVLKLPVDPTL
LKVSPKAVLNRSERELKWHVDEIPLKGHPGKLKARFPIDINDDDEAVELELFGYVKFSSQ
GTRSLSGISLQPALEGKTDFYEVDHRYSSGVYTCN*

Transcript Sequence

Transcript ID

PGSC0003DMT400029685
Transcript Infomation

pacid=37479202 locus=PGSC0003DMG400011415 ID=PGSC0003DMT400029685.v4.03 annot-version=v4.03
Sequence

ATGTCTTGTTTGGCACTTTCTCTGCAACCCACTAATGGACCTGATATCTTACTCCAAACC
CGTGAATGGTTTCCACCATCTCGAGCCCTAATGGCACTTTCAGCTTTTCGCCAGACGCGT
CTTGCATTTTCCAAACAACCACAACAAACTACCGCTGACTCATATCCTTCCGATCCTTCT
ATGTCACTTGGTGATGACCCACTTGCGGCTTCTTCGGGTCAAGTTATTGTTGGGGTTGAA
TCGAGGTATCGGGTTGTGTATCGTCTTGTGAACTCGATTTATGTGCTTGCTATTACTACT
GCTGATGATAATGATAAAGATATGGTTGTTAATAATGTGTTTGAGTGTATTAGTATTGTG
AATCAAGCTGTTTCAGTGGTGGTTACTGCGTGTCGTGGTGTAGATGTGACACCGGAGAAG
TTAGCTAAGAAATACGCGGAGATTTATATGGCGTTGGATATTGTGTTGAGAGGGGTGAGT
AATATTAGGTTGGCAGCTATGTTGGCATCTATGCACGGGGAGAGTATAGCGAAGATGGTG
CATTCAGCTGTTCATACGGAGAATAAGATTAGGGGAGGTGATAGTTGGGTGAATGTGGAG
GCGCATTCGTTGGAACAAGAAGGTGGATTGGAGACATTCTCGAAAGCGTTGTTTGAGTTG
CCTCAGGAAACGTTGGAGGCGGGAGATGAAGTGGCAGCCACGTTGGCGATTACGGGTGGA
GAAAAGGAGGAGGAGAAAATTGAGGAGATTGAGGTGGAGCAGGATCCATTTGCAGCAAGT
GATAAGATTAATCAGCCAGAGTCCTTGATGGGTGGTTTTAAGAAGGACAAGGCTAATGAG
AGTTCAGATGTCGCAAAGGCATTGGCAGGGCTTGACGTGACTACCCTGCCACCTGCTGCA
GCTAGCCAGTCAACTCACATCGGTGTGGAAGGGTTTGAAGGAGAGTATGGAGGGATAGAG
TTTAGTAATGAAGGATCAACACTGCGAGAAGATTTTGAAGGCATCAATGATGCCTGGGGT
GGTGGATTAGATGCTTCTGAGTATGTGGGTACGAAAAAGGTGAAGAAAGATCAGGGTCTT
GGTGGGCTTGAATTACTGGCGACTAGTGAACCACCAAAAGCTGCAGCTGGAGCCACTGCT
GAGGGTGCTGGGAAGAATCTTGAGGATATTTTGGTGAAGAAAATGAATGGTCCAGAAATG
TTTATTACTGAGGAGATCAGTGCCGAGTTCAGAGAATCATTGCTTGCTAGAGTTGGTTTG
ATGGGCATTGTTTACTTAAGAACCCTGCCGCCAAAGTCTTCCGATGATAACGAAACTGAG
TTTTCTTTCAAGGTTGAAGACACTGCTGCTGTTAAAAGGTTTGTCATGCAAAATTCTCGT
GTGAGCAGCCTTGGGAATGGTCTGTTTCATGTGAAGACAGCACCATCAAATGAGCCTATA
CCAATTATCAAGTACAGTTTGCTACCACGTTTAACTCCGCTGCCTTTGAGGATTCGACTT
GTTAAGCGTCTTAGTGGGACATTACTTTCTGTAATGCTGCAGTACGTTGCAAATCCTGAT
ATTCCAGTTCCATTAACCAATGTGACCTTTGTCTTGAAATTGCCAGTGGACCCAACATTA
TTGAAAGTTTCACCTAAAGCTGTGTTGAACCGCTCTGAGAGAGAACTGAAATGGCATGTT
GATGAGATTCCGCTCAAGGGTCATCCTGGCAAATTGAAGGCGAGGTTCCCCATTGATATT
AATGATGATGATGAGGCGGTAGAGCTAGAGCTTTTTGGTTATGTAAAGTTTTCATCCCAA
GGAACTAGATCTTTGTCTGGCATTTCTCTGCAGCCGGCTTTAGAGGGCAAGACTGATTTT
TATGAGGTTGATCACAGGTATTCAAGTGGAGTTTACACATGCAACTAA