Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029607
CDS Infomation

pacid=37454764 polypeptide=PGSC0003DMP400020162 locus=PGSC0003DMG400011384 ID=PGSC0003DMT400029607.v4.03 annot-version=v4.03
Sequence

ATGGCAATGAGCCAGCTGAAGATTATTGAGTTGGAGGAAGGATGGGAATTTATGCAGAGG
GGAATCACTAAATTGAAGAAAATTTTAGAAGGACAACAGCATTCTTTCAGCTCTGAAGAG
TACATGATGCTCTACACAACTATATATAACATGTGCACACAGAAGCCGCCAAATGATTAC
TCACAACAGTTGTATGAGAAGTACAGGGAAGCATTTGTAGAATATATCAATTCTACGGTT
CTGCCTGCTTTACGAGAGAGGCATGATGAGTTTATGTTGAGGGAGTTTGTGAAAAGATGG
GCGAATCACAAACTTATGGTTAGGTGGCTCTCGCGGTTCTTCCATTATCTCGACCGTTAT
TTTATTGCCCGAAGGTCGCTACCTGGACTTCATGAAGTTGGTCTGATGTGCTTCCGTGAT
CTGATTTATCAGGAGTTGAATGGTAAAGCTAGAGATGCAGTTAATGTGTTGATTGAACAA
GAACGTGAGGGTGAGCAGATTGACAGAGGTCTACTGAAGAATGTGCTCGATATATTTGTT
GGAATTGGTATGGGGGAAATGGAGTATTATGAGAATGATTTTGAAGATGCAATGCTTAAA
GATACTGCAGCTTATTATTCTCGGAAAGCTTCAAGTTGGATTGTGGAAGATTCTTGTCCA
GATTATATGTTGAAGGCAGAGGAGTGCTTGAAGAAAGAGAAAGATAGAGTGTCTCATTAT
CTCCATGTTCTTAGTGAGACAAAACTTCTAGAGAAAGTGCAAAATGAATTGTTGGTTGTA
TATACCAATCAGTTACTTGAGAAGGAGCATTCTGGATGCCGAGTATTGCTTAGAGATGAT
AAGGTAGAGGATTTATCTCGAATGTATAGGCTATTCCACAGAATCCCCAAGGGATTGGAG
CCTGTTTCAAATATGTTTAAGCAGCATGTCGTAGCTGAAGGCATGGTCTTGGTGCAACAA
GCTGAAGATACGACAAATAGCAAGGCCGAAAGTTCAGGCTCAGGAGAGCAGGTCTTTGTT
AGAAAGTTGATTGAGCTTCACGATAAGTATATGGCTTATGTTACGAACTGTTTTGCTAAT
AACACTCTCTTTCATAAGGCTCTCAAGGAGGCATTTGAGGTCTTCTGCAACAAGATTGTA
TCTGGTTGTTCAAGTGCAGAGCTCCTTGCTTCTTTTTGTGATAATGTTCTTAAGAAAGGT
GGGAGTGAAAAACTCAGTGATGATGATATTGAGGAGACATTGGATAAGGTGGTCAAGCTT
CTCGCTTACATTAGTGACAAAGACCTTTTTGCGGAGTTCTACAGGAAGAAGCTTTCTCGT
CGATTGCTCTTCGATAAAAGTGCCAATGATGACCACGAAAGGCTTATCTTAACAAAGCTA
AAGCAACAGTGTGGTGGGCAGTTCACATCAAAGATGGAGGGAATGGTGACAGACTTGACT
TTGGCTAGGGAAAATCAGAACCATTTTCAAGAATATCTCAGCAACAACCCTGCCGCGAGT
CCTGGAATTGATTTAACTGTCACAGTTCTTACAACTGGGTTCTGGCCTAGTTATAAATCT
TCTGATTTGTGTCTCCCTGTGGAAATGGTGAAGTGTGTAGAAGTCTTCAAGGAATTCTAT
CAGACAAAAACGAAACACAGGAAATTGACATGGATTTATTCATTGGGTACGTGTAACATC
AACGGGAAGTTTGATTCAAAAACCATTGAACTGATTCTGGGAACTTATCAGGCTGCTGCT
CTGTTATTGTTTAATTCTTCAGATAGATTGAGTTACTCAGAAATCAAGAGTCAGTTAAAT
TTGGCTGATGATGACTTGGTCAGATTGCTTCAATCCCTTTCATGTGCCAAGTATAAAATT
CTGATCAAGGAGCCTAGCAATAGAACTGTTTCGTCTTCTGATCATTTTGAGTTCAACTCC
AAGTTCACTGACAGGATGAGGCGGATTAGGGTCCCATTACCTCCTGTAGATGAAAGGAAA
AAGGTGGTCGAGGATGTAGACAAAGATAGACGTTATGCAATTGATGCCTGTATCGTGCGC
ATTATGAAGAGTCGGAAAGTTCTTCCTCATCAACAACTAGTGTTGGAGTGTGTTGAGCAG
TTGAGCCGAATGTTTAAGCCTGACTTCAAAGCAATCAAAAAGAGAATTGAAGATCTCATC
ACTAGAGATTACTTGGAAAGAGACAAAGAGAACCCAAATTTGTTCAAGTATTTAGCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400020162
PEP Infomation

pacid=37454764 transcript=PGSC0003DMT400029607 locus=PGSC0003DMG400011384 ID=PGSC0003DMT400029607.v4.03 annot-version=v4.03
Sequence

MAMSQLKIIELEEGWEFMQRGITKLKKILEGQQHSFSSEEYMMLYTTIYNMCTQKPPNDY
SQQLYEKYREAFVEYINSTVLPALRERHDEFMLREFVKRWANHKLMVRWLSRFFHYLDRY
FIARRSLPGLHEVGLMCFRDLIYQELNGKARDAVNVLIEQEREGEQIDRGLLKNVLDIFV
GIGMGEMEYYENDFEDAMLKDTAAYYSRKASSWIVEDSCPDYMLKAEECLKKEKDRVSHY
LHVLSETKLLEKVQNELLVVYTNQLLEKEHSGCRVLLRDDKVEDLSRMYRLFHRIPKGLE
PVSNMFKQHVVAEGMVLVQQAEDTTNSKAESSGSGEQVFVRKLIELHDKYMAYVTNCFAN
NTLFHKALKEAFEVFCNKIVSGCSSAELLASFCDNVLKKGGSEKLSDDDIEETLDKVVKL
LAYISDKDLFAEFYRKKLSRRLLFDKSANDDHERLILTKLKQQCGGQFTSKMEGMVTDLT
LARENQNHFQEYLSNNPAASPGIDLTVTVLTTGFWPSYKSSDLCLPVEMVKCVEVFKEFY
QTKTKHRKLTWIYSLGTCNINGKFDSKTIELILGTYQAAALLLFNSSDRLSYSEIKSQLN
LADDDLVRLLQSLSCAKYKILIKEPSNRTVSSSDHFEFNSKFTDRMRRIRVPLPPVDERK
KVVEDVDKDRRYAIDACIVRIMKSRKVLPHQQLVLECVEQLSRMFKPDFKAIKKRIEDLI
TRDYLERDKENPNLFKYLA*

Transcript Sequence

Transcript ID

PGSC0003DMT400029607
Transcript Infomation

pacid=37454764 locus=PGSC0003DMG400011384 ID=PGSC0003DMT400029607.v4.03 annot-version=v4.03
Sequence

ATGGCAATGAGCCAGCTGAAGATTATTGAGTTGGAGGAAGGATGGGAATTTATGCAGAGG
GGAATCACTAAATTGAAGAAAATTTTAGAAGGACAACAGCATTCTTTCAGCTCTGAAGAG
TACATGATGCTCTACACAACTATATATAACATGTGCACACAGAAGCCGCCAAATGATTAC
TCACAACAGTTGTATGAGAAGTACAGGGAAGCATTTGTAGAATATATCAATTCTACGGTT
CTGCCTGCTTTACGAGAGAGGCATGATGAGTTTATGTTGAGGGAGTTTGTGAAAAGATGG
GCGAATCACAAACTTATGGTTAGGTGGCTCTCGCGGTTCTTCCATTATCTCGACCGTTAT
TTTATTGCCCGAAGGTCGCTACCTGGACTTCATGAAGTTGGTCTGATGTGCTTCCGTGAT
CTGATTTATCAGGAGTTGAATGGTAAAGCTAGAGATGCAGTTAATGTGTTGATTGAACAA
GAACGTGAGGGTGAGCAGATTGACAGAGGTCTACTGAAGAATGTGCTCGATATATTTGTT
GGAATTGGTATGGGGGAAATGGAGTATTATGAGAATGATTTTGAAGATGCAATGCTTAAA
GATACTGCAGCTTATTATTCTCGGAAAGCTTCAAGTTGGATTGTGGAAGATTCTTGTCCA
GATTATATGTTGAAGGCAGAGGAGTGCTTGAAGAAAGAGAAAGATAGAGTGTCTCATTAT
CTCCATGTTCTTAGTGAGACAAAACTTCTAGAGAAAGTGCAAAATGAATTGTTGGTTGTA
TATACCAATCAGTTACTTGAGAAGGAGCATTCTGGATGCCGAGTATTGCTTAGAGATGAT
AAGGTAGAGGATTTATCTCGAATGTATAGGCTATTCCACAGAATCCCCAAGGGATTGGAG
CCTGTTTCAAATATGTTTAAGCAGCATGTCGTAGCTGAAGGCATGGTCTTGGTGCAACAA
GCTGAAGATACGACAAATAGCAAGGCCGAAAGTTCAGGCTCAGGAGAGCAGGTCTTTGTT
AGAAAGTTGATTGAGCTTCACGATAAGTATATGGCTTATGTTACGAACTGTTTTGCTAAT
AACACTCTCTTTCATAAGGCTCTCAAGGAGGCATTTGAGGTCTTCTGCAACAAGATTGTA
TCTGGTTGTTCAAGTGCAGAGCTCCTTGCTTCTTTTTGTGATAATGTTCTTAAGAAAGGT
GGGAGTGAAAAACTCAGTGATGATGATATTGAGGAGACATTGGATAAGGTGGTCAAGCTT
CTCGCTTACATTAGTGACAAAGACCTTTTTGCGGAGTTCTACAGGAAGAAGCTTTCTCGT
CGATTGCTCTTCGATAAAAGTGCCAATGATGACCACGAAAGGCTTATCTTAACAAAGCTA
AAGCAACAGTGTGGTGGGCAGTTCACATCAAAGATGGAGGGAATGGTGACAGACTTGACT
TTGGCTAGGGAAAATCAGAACCATTTTCAAGAATATCTCAGCAACAACCCTGCCGCGAGT
CCTGGAATTGATTTAACTGTCACAGTTCTTACAACTGGGTTCTGGCCTAGTTATAAATCT
TCTGATTTGTGTCTCCCTGTGGAAATGGTGAAGTGTGTAGAAGTCTTCAAGGAATTCTAT
CAGACAAAAACGAAACACAGGAAATTGACATGGATTTATTCATTGGGTACGTGTAACATC
AACGGGAAGTTTGATTCAAAAACCATTGAACTGATTCTGGGAACTTATCAGGCTGCTGCT
CTGTTATTGTTTAATTCTTCAGATAGATTGAGTTACTCAGAAATCAAGAGTCAGTTAAAT
TTGGCTGATGATGACTTGGTCAGATTGCTTCAATCCCTTTCATGTGCCAAGTATAAAATT
CTGATCAAGGAGCCTAGCAATAGAACTGTTTCGTCTTCTGATCATTTTGAGTTCAACTCC
AAGTTCACTGACAGGATGAGGCGGATTAGGGTCCCATTACCTCCTGTAGATGAAAGGAAA
AAGGTGGTCGAGGATGTAGACAAAGATAGACGTTATGCAATTGATGCCTGTATCGTGCGC
ATTATGAAGAGTCGGAAAGTTCTTCCTCATCAACAACTAGTGTTGGAGTGTGTTGAGCAG
TTGAGCCGAATGTTTAAGCCTGACTTCAAAGCAATCAAAAAGAGAATTGAAGATCTCATC
ACTAGAGATTACTTGGAAAGAGACAAAGAGAACCCAAATTTGTTCAAGTATTTAGCCTGA