Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029566
CDS Infomation

pacid=37455349 polypeptide=PGSC0003DMP400020127 locus=PGSC0003DMG401011368 ID=PGSC0003DMT400029566.v4.03 annot-version=v4.03
Sequence

ATGGCAATTGCAACTCTTCCCTCCTCCCATCGCCTCCATTTCTGCTTCTTCTCTTCAGCA
TCTTCCAAATTCTCACCAACTACACAATTATGCCTAAATTCCCCCCCAAAGAATCGTGTT
TCACTTGTCATTTGTTCTTCTTCTACTTCGCCTCCTCCGCCATCATCGTCGTCGCCCCAA
GTCAGTGAATCCACTCCTACTGCTGAGTCCTGCGTCAATGCCGGCCTCGACCTCTTCTCT
AAAGGACGGGTGAAAGATGCTCTTGTGCTGTTCGACACAGCACTTACTTTAAATCCCAAC
CCTGTGGAGGCTCAAGCTGCATTTTATAACAAAGCATGCTGCCATGCCTACCGGGGGGAA
GGAAAGAAAGCTGCTGAGTGTTTACGCACTGCTTTGAAAGAGTATAACTTAAAGTTTGGG
ACAATCCTTAATGATCCGGATTTGGCTTCCTTCAGAGCATTGCCTGAATTTAAGGAACTA
CAGGAAGAGGCTAGGTTAGGAGGGGAAGACATAGGGTACAGTTTCCGTAGAGACCTTAAG
CTCATCAGTGAGGTACAAGCACCATTTAGGGGGGTCAGAAGATTCTTCTATGTGGCATTC
ATCGCTGCTGCTGGAATTTCTACATTCTTCACTATACCCAGGTTAATCCGTGCAATTCAA
GGTGGAGATGGTGCTCCTGATTTTGGGGCGACTGCAGGAAATGCTGCTATAAATGTCACT
GGTATTGTTGTTTTTGTGGCGTTGTTGTTTTGGGACAACAAAAAAGAGGAGGAACAGCTT
GCACAAATATTGCGTGATGAAACACTATCAAGGCTGCCTTTGCGCCTTTCAACTGATAGG
ATTGTTGAACTTGTCCAGCTAAGAGACACCGTGAGGCCTGTTATTTTGGCTGGAAAAAAG
GAGACAGTCTCTCTGGCTATGAGAAATGCTGAGAAATTCCGCACTGAGCTTCTTAAACGC
GGAGTCCTTCTAGTTCCTGTTATTTGGGGTGAAGGTAGGGAAACAAAAATAAAGAAAGGT
TTTGGTCTTTCGCAAAAAGCAGTCACTTCCCTCCCATCCATAGGGGAGGATTTTGACCAA
AGAACTCAGTCAATAATTGCAAAATCAAAACTGAAGTCAGAGATCCGGTTCAAGGCGGAG
GTCGTTTCACCTGCAGAGTGGGAAAGGTGGATAAGGGATCAACAGAAGTCCGAAGGTGTT
ACTCCTGGTGAAGATGTCTACATTATACTTCGTCTAGATGGTCGTGTTCGACGATCAGGA
AAGGGAATGCCTGACTGGGCTCAAATTTTAAAAGAACTGCCTCCAATGGAAGCAATATTA
AGCAAGCTGGAAAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400020127
PEP Infomation

pacid=37455349 transcript=PGSC0003DMT400029566 locus=PGSC0003DMG401011368 ID=PGSC0003DMT400029566.v4.03 annot-version=v4.03
Sequence

MAIATLPSSHRLHFCFFSSASSKFSPTTQLCLNSPPKNRVSLVICSSSTSPPPPSSSSPQ
VSESTPTAESCVNAGLDLFSKGRVKDALVLFDTALTLNPNPVEAQAAFYNKACCHAYRGE
GKKAAECLRTALKEYNLKFGTILNDPDLASFRALPEFKELQEEARLGGEDIGYSFRRDLK
LISEVQAPFRGVRRFFYVAFIAAAGISTFFTIPRLIRAIQGGDGAPDFGATAGNAAINVT
GIVVFVALLFWDNKKEEEQLAQILRDETLSRLPLRLSTDRIVELVQLRDTVRPVILAGKK
ETVSLAMRNAEKFRTELLKRGVLLVPVIWGEGRETKIKKGFGLSQKAVTSLPSIGEDFDQ
RTQSIIAKSKLKSEIRFKAEVVSPAEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSG
KGMPDWAQILKELPPMEAILSKLER*

Transcript Sequence

Transcript ID

PGSC0003DMT400029566
Transcript Infomation

pacid=37455349 locus=PGSC0003DMG401011368 ID=PGSC0003DMT400029566.v4.03 annot-version=v4.03
Sequence

ATGGCAATTGCAACTCTTCCCTCCTCCCATCGCCTCCATTTCTGCTTCTTCTCTTCAGCA
TCTTCCAAATTCTCACCAACTACACAATTATGCCTAAATTCCCCCCCAAAGAATCGTGTT
TCACTTGTCATTTGTTCTTCTTCTACTTCGCCTCCTCCGCCATCATCGTCGTCGCCCCAA
GTCAGTGAATCCACTCCTACTGCTGAGTCCTGCGTCAATGCCGGCCTCGACCTCTTCTCT
AAAGGACGGGTGAAAGATGCTCTTGTGCTGTTCGACACAGCACTTACTTTAAATCCCAAC
CCTGTGGAGGCTCAAGCTGCATTTTATAACAAAGCATGCTGCCATGCCTACCGGGGGGAA
GGAAAGAAAGCTGCTGAGTGTTTACGCACTGCTTTGAAAGAGTATAACTTAAAGTTTGGG
ACAATCCTTAATGATCCGGATTTGGCTTCCTTCAGAGCATTGCCTGAATTTAAGGAACTA
CAGGAAGAGGCTAGGTTAGGAGGGGAAGACATAGGGTACAGTTTCCGTAGAGACCTTAAG
CTCATCAGTGAGGTACAAGCACCATTTAGGGGGGTCAGAAGATTCTTCTATGTGGCATTC
ATCGCTGCTGCTGGAATTTCTACATTCTTCACTATACCCAGGTTAATCCGTGCAATTCAA
GGTGGAGATGGTGCTCCTGATTTTGGGGCGACTGCAGGAAATGCTGCTATAAATGTCACT
GGTATTGTTGTTTTTGTGGCGTTGTTGTTTTGGGACAACAAAAAAGAGGAGGAACAGCTT
GCACAAATATTGCGTGATGAAACACTATCAAGGCTGCCTTTGCGCCTTTCAACTGATAGG
ATTGTTGAACTTGTCCAGCTAAGAGACACCGTGAGGCCTGTTATTTTGGCTGGAAAAAAG
GAGACAGTCTCTCTGGCTATGAGAAATGCTGAGAAATTCCGCACTGAGCTTCTTAAACGC
GGAGTCCTTCTAGTTCCTGTTATTTGGGGTGAAGGTAGGGAAACAAAAATAAAGAAAGGT
TTTGGTCTTTCGCAAAAAGCAGTCACTTCCCTCCCATCCATAGGGGAGGATTTTGACCAA
AGAACTCAGTCAATAATTGCAAAATCAAAACTGAAGTCAGAGATCCGGTTCAAGGCGGAG
GTCGTTTCACCTGCAGAGTGGGAAAGGTGGATAAGGGATCAACAGAAGTCCGAAGGTGTT
ACTCCTGGTGAAGATGTCTACATTATACTTCGTCTAGATGGTCGTGTTCGACGATCAGGA
AAGGGAATGCCTGACTGGGCTCAAATTTTAAAAGAACTGCCTCCAATGGAAGCAATATTA
AGCAAGCTGGAAAGATAA