Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029547
CDS Infomation

pacid=37456349 polypeptide=PGSC0003DMP400020116 locus=PGSC0003DMG402011364 ID=PGSC0003DMT400029547.v4.03 annot-version=v4.03
Sequence

ATGGTAGCTAGATTCATCACAAGCAATCTCAATCGAATACGAAAAACCTACTCAGTATCA
ACAACTCTCAGTAGGCACAACTACGATTTCAATTCTCTATGTTCTTCTCCGTATTTGCAA
TTGGATGATGACGATTCAGCTACACGTGTAGTGAATCCGAGTTTCATGCTGCAGAAGAGA
TGGCATACAGGCGATTCACATTCTCATCATCATGATCATCACGATCTCCGCTCCGGTAAA
GACGGCGAGAGGATTTTTCGGCTTGGACTTGCTGCTGACATTGGCCTCGCCGCTAGTAAA
ACTTTTACAGGTTATGTATGTGGAAGCACCGCCATTATTGCTGATGCGGCTCATTCTATC
TCCGATGTGGTTCTGAGTGGTGTATCATTGCTGTCCTTTCAAGCTGCAAGGGTTCCCAAG
GACAAAGAACATCCTTATGGACATGGTAAATTTGAAACTCTTGGAGCTCTTGGAATTTCT
GGTGTGCTGTTGGCTACTGCTGGTGGCATAGGATGGCATGCTTTAGATGTTTTGCTGGGA
TTGTGGTCTGCAGCGCCTGAAGTTTTTAATCAGTCAATGACTCATCAGCACGTGCATGAG
CAACATCACCATGGAATTGATATGGATCACCCTATCCTTGCTTTGAGTGTGACGATACTC
TCTATAGCTGTTAAAGAAGGATTATACTGGATAACAAAACGAGAGGGAGAAAGGGTTGGC
AGTGGGCTAATGAAAGCCAATGCCTGGCATCATCGTGCCGATGCAGTATCTTCTTTTGTT
GCTCTCATAGGGGTTGGTGGTTCTATCCTTGGAGTGAGGATCCTGGATCCACTTGCTGGG
CTGGCTGTTGCAGGCATGATCATGAAGGCTGGACTTGAAACTGGATATCAGAGTGTCTTG
GAATTGGTTGATGCTGCTATTCCTTCGCATATCCTGGAGCCTTTCAAGCGCACAATTCTA
CAAGTTGACGGAGTTGAGGGTTGTAGTCACCTGAGAGGAAGGAGGGCTGGTTCATATCTC
TATCTTGATGTCATAGTTGAGGTTGATCCCTTTTCTAGTGTAAGTGCTGCGCATGAGATC
GGGGAAAACGTCAGCCGCGAAATCCAGCGATTACATCCCGAAATAGCTGAAGTCTTCATT
CACATAGAACCATCAACTATACACATTCCACCCGCTGTTGTGTCTCAACAGAGAACTGCT
AACACAATGGATGCAGACATTGAAAATATAGTTCGCAACATTTTATCTACAAACTTTTCT
CAGAAGATGATTGTTGAGCGTGTGACTCCACATCTACTGCAAGGACAGGTTTTACTTCAA
GTGGAAGTTTCTATGCCTCCCGATCTCTTGATTAGGGATGCGATAAAAGTTGCAGAAGAA
GCAGAAAAATTAATCATAGAGGCAGCACCAAATATTGTGCATGTGTGTATCCAGCTGCGC
CTAGGGCAATCCATGCCAGAGTCTTACCACAAATTGGTGGAGATCACAAGTCGGGGACTT
GTATACACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400020116
PEP Infomation

pacid=37456349 transcript=PGSC0003DMT400029547 locus=PGSC0003DMG402011364 ID=PGSC0003DMT400029547.v4.03 annot-version=v4.03
Sequence

MVARFITSNLNRIRKTYSVSTTLSRHNYDFNSLCSSPYLQLDDDDSATRVVNPSFMLQKR
WHTGDSHSHHHDHHDLRSGKDGERIFRLGLAADIGLAASKTFTGYVCGSTAIIADAAHSI
SDVVLSGVSLLSFQAARVPKDKEHPYGHGKFETLGALGISGVLLATAGGIGWHALDVLLG
LWSAAPEVFNQSMTHQHVHEQHHHGIDMDHPILALSVTILSIAVKEGLYWITKREGERVG
SGLMKANAWHHRADAVSSFVALIGVGGSILGVRILDPLAGLAVAGMIMKAGLETGYQSVL
ELVDAAIPSHILEPFKRTILQVDGVEGCSHLRGRRAGSYLYLDVIVEVDPFSSVSAAHEI
GENVSREIQRLHPEIAEVFIHIEPSTIHIPPAVVSQQRTANTMDADIENIVRNILSTNFS
QKMIVERVTPHLLQGQVLLQVEVSMPPDLLIRDAIKVAEEAEKLIIEAAPNIVHVCIQLR
LGQSMPESYHKLVEITSRGLVYT*

Transcript Sequence

Transcript ID

PGSC0003DMT400029547
Transcript Infomation

pacid=37456349 locus=PGSC0003DMG402011364 ID=PGSC0003DMT400029547.v4.03 annot-version=v4.03
Sequence

ATGGTAGCTAGATTCATCACAAGCAATCTCAATCGAATACGAAAAACCTACTCAGTATCA
ACAACTCTCAGTAGGCACAACTACGATTTCAATTCTCTATGTTCTTCTCCGTATTTGCAA
TTGGATGATGACGATTCAGCTACACGTGTAGTGAATCCGAGTTTCATGCTGCAGAAGAGA
TGGCATACAGGCGATTCACATTCTCATCATCATGATCATCACGATCTCCGCTCCGGTAAA
GACGGCGAGAGGATTTTTCGGCTTGGACTTGCTGCTGACATTGGCCTCGCCGCTAGTAAA
ACTTTTACAGGTTATGTATGTGGAAGCACCGCCATTATTGCTGATGCGGCTCATTCTATC
TCCGATGTGGTTCTGAGTGGTGTATCATTGCTGTCCTTTCAAGCTGCAAGGGTTCCCAAG
GACAAAGAACATCCTTATGGACATGGTAAATTTGAAACTCTTGGAGCTCTTGGAATTTCT
GGTGTGCTGTTGGCTACTGCTGGTGGCATAGGATGGCATGCTTTAGATGTTTTGCTGGGA
TTGTGGTCTGCAGCGCCTGAAGTTTTTAATCAGTCAATGACTCATCAGCACGTGCATGAG
CAACATCACCATGGAATTGATATGGATCACCCTATCCTTGCTTTGAGTGTGACGATACTC
TCTATAGCTGTTAAAGAAGGATTATACTGGATAACAAAACGAGAGGGAGAAAGGGTTGGC
AGTGGGCTAATGAAAGCCAATGCCTGGCATCATCGTGCCGATGCAGTATCTTCTTTTGTT
GCTCTCATAGGGGTTGGTGGTTCTATCCTTGGAGTGAGGATCCTGGATCCACTTGCTGGG
CTGGCTGTTGCAGGCATGATCATGAAGGCTGGACTTGAAACTGGATATCAGAGTGTCTTG
GAATTGGTTGATGCTGCTATTCCTTCGCATATCCTGGAGCCTTTCAAGCGCACAATTCTA
CAAGTTGACGGAGTTGAGGGTTGTAGTCACCTGAGAGGAAGGAGGGCTGGTTCATATCTC
TATCTTGATGTCATAGTTGAGGTTGATCCCTTTTCTAGTGTAAGTGCTGCGCATGAGATC
GGGGAAAACGTCAGCCGCGAAATCCAGCGATTACATCCCGAAATAGCTGAAGTCTTCATT
CACATAGAACCATCAACTATACACATTCCACCCGCTGTTGTGTCTCAACAGAGAACTGCT
AACACAATGGATGCAGACATTGAAAATATAGTTCGCAACATTTTATCTACAAACTTTTCT
CAGAAGATGATTGTTGAGCGTGTGACTCCACATCTACTGCAAGGACAGGTTTTACTTCAA
GTGGAAGTTTCTATGCCTCCCGATCTCTTGATTAGGGATGCGATAAAAGTTGCAGAAGAA
GCAGAAAAATTAATCATAGAGGCAGCACCAAATATTGTGCATGTGTGTATCCAGCTGCGC
CTAGGGCAATCCATGCCAGAGTCTTACCACAAATTGGTGGAGATCACAAGTCGGGGACTT
GTATACACTTAA