Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029466
CDS Infomation

pacid=37439922 polypeptide=PGSC0003DMP400020060 locus=PGSC0003DMG400011330 ID=PGSC0003DMT400029466.v4.03 annot-version=v4.03
Sequence

ATGATTTGCCGGAAAATTTATCAAGGTAAGCTCCGGAATTCCGCCCTCCGGCAGACCATT
TTCCGGTGGTTTCAGTCTTCCGTTGAAACTCCGGTGACGCCTGTTACTTCTACTGTATGT
AGTGGCAAGAGAATTCAGTCTCAACTTCACTTTCTTAGAAACTATACGACGCCGTTTTGC
TCATATACTAAGTCAAATGCTTCATTTACTCTAAGAGGGTGTGGTTTTTCAACTCAAGCT
GCATTGGATATTCCTGTTGGTGGGATAATTGATATACCTCTGGCGCAAACTGGTGAAGGC
ATTGCGGAATGTGAACTTATCAAATGGTTTGTTCAGGAGGGGGACCAGGTCGAAGAATTC
CAACCTCTTTGTGAAGTTCAGAGTGACAAGGCAACGATTGAAATAACAAGTCGTTACAAG
GGAAAAATTTCTCAAATTCTTCATGTACCTGGTAGCATCGTAAAGGTTGGAGAAACACTT
TTGAAGATCGGCGTTGATGAAATTCTTGATCCTACTGAGACTTATGATGCTTCAGAAAAG
ATGACATCGGTGGAATCTGATTTCAGTGACACAAGTGACATCAGCTCTGTGCCTGAAGAA
ACCAAGATGGGTGGAGTGTTATCCACACCTGCTGTCCGCAACCTTGTAAAGCAGTATGGT
TTGGACATAAATGATGTTCCTGCAACTGGGAAAGATGGAAGGATACTTAAAGAGGACGTG
ATAAATTATGCAATGCAAAAAGGACTAATTAATGGAGCACCAGCATGTGCACAACAAAAA
CTTTCAGAGGTTTCACCTCTCATTGGAGGGGGATATGAAGATAAGACGCTTCAGCTAAGG
GGGTATCAGCGTGCCATGGTTAAGTCAATGACATTAGCTGCAAGAATTCCACATTTTTAT
TATGTCGAAGAGATAAATTGTGATGCACTTGTGGATCTCAAAACATCATTCAAGAATGAG
ACTTCTGATCCGGAGATCAAGCACACTTTCCTTCCTGTCCTCATAAAATCACTGTCGATG
GCTTTAACTACACATCCCATGCTAAATAGTCGCTTCAGTGAGGAATCCTATGAGGTTATC
CTAAAAGGGTCGCACAACATTGGAATAGCAATGGCTACTCCAAATGGTTTGGTTGTACCA
AACATAAAAAATGTTCAGTCTCTCTCAATCTTGGAGATAACAAAGGAACTGTCACGGCTA
CTGAATTGTGCTAAGATAAACAAGCTTAGTTCTGACGATATATCAGGGGGAACTATTACT
CTAAGCAATATTGGAGGAATTGGTGGAAAGTTTGGTTCCCCGCTTGTAAATTCACCTGAA
GTTGCCATCATAGCAATGGGCCGGATCCAGAAAATTCCACACTTTGCTGAAGATGGGAAT
GTATGTCCTGCATCAGTCATGACGATAAATATAGGTGCAGATCATAGAGTTCTTGATGGA
GCAACTGTTGCAAGGTTCTGTAACGACTGGAAAAAGTTTGTGGAAAAACCAGACCTACTA
TTGTTGCATACAAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400020060
PEP Infomation

pacid=37439922 transcript=PGSC0003DMT400029466 locus=PGSC0003DMG400011330 ID=PGSC0003DMT400029466.v4.03 annot-version=v4.03
Sequence

MICRKIYQGKLRNSALRQTIFRWFQSSVETPVTPVTSTVCSGKRIQSQLHFLRNYTTPFC
SYTKSNASFTLRGCGFSTQAALDIPVGGIIDIPLAQTGEGIAECELIKWFVQEGDQVEEF
QPLCEVQSDKATIEITSRYKGKISQILHVPGSIVKVGETLLKIGVDEILDPTETYDASEK
MTSVESDFSDTSDISSVPEETKMGGVLSTPAVRNLVKQYGLDINDVPATGKDGRILKEDV
INYAMQKGLINGAPACAQQKLSEVSPLIGGGYEDKTLQLRGYQRAMVKSMTLAARIPHFY
YVEEINCDALVDLKTSFKNETSDPEIKHTFLPVLIKSLSMALTTHPMLNSRFSEESYEVI
LKGSHNIGIAMATPNGLVVPNIKNVQSLSILEITKELSRLLNCAKINKLSSDDISGGTIT
LSNIGGIGGKFGSPLVNSPEVAIIAMGRIQKIPHFAEDGNVCPASVMTINIGADHRVLDG
ATVARFCNDWKKFVEKPDLLLLHTR*

Transcript Sequence

Transcript ID

PGSC0003DMT400029466
Transcript Infomation

pacid=37439922 locus=PGSC0003DMG400011330 ID=PGSC0003DMT400029466.v4.03 annot-version=v4.03
Sequence

ATGATTTGCCGGAAAATTTATCAAGGTAAGCTCCGGAATTCCGCCCTCCGGCAGACCATT
TTCCGGTGGTTTCAGTCTTCCGTTGAAACTCCGGTGACGCCTGTTACTTCTACTGTATGT
AGTGGCAAGAGAATTCAGTCTCAACTTCACTTTCTTAGAAACTATACGACGCCGTTTTGC
TCATATACTAAGTCAAATGCTTCATTTACTCTAAGAGGGTGTGGTTTTTCAACTCAAGCT
GCATTGGATATTCCTGTTGGTGGGATAATTGATATACCTCTGGCGCAAACTGGTGAAGGC
ATTGCGGAATGTGAACTTATCAAATGGTTTGTTCAGGAGGGGGACCAGGTCGAAGAATTC
CAACCTCTTTGTGAAGTTCAGAGTGACAAGGCAACGATTGAAATAACAAGTCGTTACAAG
GGAAAAATTTCTCAAATTCTTCATGTACCTGGTAGCATCGTAAAGGTTGGAGAAACACTT
TTGAAGATCGGCGTTGATGAAATTCTTGATCCTACTGAGACTTATGATGCTTCAGAAAAG
ATGACATCGGTGGAATCTGATTTCAGTGACACAAGTGACATCAGCTCTGTGCCTGAAGAA
ACCAAGATGGGTGGAGTGTTATCCACACCTGCTGTCCGCAACCTTGTAAAGCAGTATGGT
TTGGACATAAATGATGTTCCTGCAACTGGGAAAGATGGAAGGATACTTAAAGAGGACGTG
ATAAATTATGCAATGCAAAAAGGACTAATTAATGGAGCACCAGCATGTGCACAACAAAAA
CTTTCAGAGGTTTCACCTCTCATTGGAGGGGGATATGAAGATAAGACGCTTCAGCTAAGG
GGGTATCAGCGTGCCATGGTTAAGTCAATGACATTAGCTGCAAGAATTCCACATTTTTAT
TATGTCGAAGAGATAAATTGTGATGCACTTGTGGATCTCAAAACATCATTCAAGAATGAG
ACTTCTGATCCGGAGATCAAGCACACTTTCCTTCCTGTCCTCATAAAATCACTGTCGATG
GCTTTAACTACACATCCCATGCTAAATAGTCGCTTCAGTGAGGAATCCTATGAGGTTATC
CTAAAAGGGTCGCACAACATTGGAATAGCAATGGCTACTCCAAATGGTTTGGTTGTACCA
AACATAAAAAATGTTCAGTCTCTCTCAATCTTGGAGATAACAAAGGAACTGTCACGGCTA
CTGAATTGTGCTAAGATAAACAAGCTTAGTTCTGACGATATATCAGGGGGAACTATTACT
CTAAGCAATATTGGAGGAATTGGTGGAAAGTTTGGTTCCCCGCTTGTAAATTCACCTGAA
GTTGCCATCATAGCAATGGGCCGGATCCAGAAAATTCCACACTTTGCTGAAGATGGGAAT
GTATGTCCTGCATCAGTCATGACGATAAATATAGGTGCAGATCATAGAGTTCTTGATGGA
GCAACTGTTGCAAGGTTCTGTAACGACTGGAAAAAGTTTGTGGAAAAACCAGACCTACTA
TTGTTGCATACAAGATAA