Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029424
CDS Infomation

pacid=37439817 polypeptide=PGSC0003DMP400020029 locus=PGSC0003DMG400011312 ID=PGSC0003DMT400029424.v4.03 annot-version=v4.03
Sequence

ATGGGCTTGGCAACCTATTTGAAAAACATGATTTTAGTTGTGTGCATGGGAAGGCTGGGA
AGCTTGGAGCTGGCAGGGGGTGCACTGGCCATTGGCTTCACCAATATTACTGGTTACTCA
GTCTTGTCTGGCCTAGCCTTGGGGATGGAACCACTTTCTAGCCAGGCTTTTGGATCAAGA
AACTTAACTTTAGTGTCTCTTGCCCTCCAAAGGACAATCTTTATGTTATTAACTGCATCT
ATACCTATTGCCTTTTTATGGTTTAATTTTGAGTCTCTCATGCTAAAGCTACACCAAGAC
TCACAAATAATACATGTAGCAAGTGTATTTTGCAGATTTGCTGTCCCAGATCTTATTGCT
AACAGCTTTCTTCACCCTTTACGCATCTACTTACGGTGTAAAGGTACAACATGGCCTCTA
TTATGGTGTACTTCACTTGCAACAATGCTGCATTTCCCTATCACAGTTTACCTGACTTTT
ACTCTGAGTCTTGGGATCCAAGGAATTGCAATTTCAACCTTTGTCTCCAACTTTGTCACC
TTATTCTTCCTTTTAGGCTATATATTCTTTACTTATGACCAAAACGGATCTCCATCAAAA
CCCCTAGCAGAAAATGTAAAACTTCTTCCTTCCATTTCTGTGGGAGAACAATGGATAATG
CTTCTTCAACTTGCTATACCTAGCTGTTTAGCAGTTTGCTTAGAGTGGTGGTGGTATGAA
TTCATGACAGTTCTAGCCGGCTACCTTGACAGACCTGAAGTTCCACTTGCTGCATCTGCT
ATCGTTATACAAACCACATCCCTCATGTACACATTACCTTCGGCCCTAAGTGCTTCAGTC
TCAAGCAGGGTAGGGAATGAACTTGGAGCGGGACGGCCAGCTAAGGCCCGCTTGGCAACA
GGGATAGCCATAGGGCTGGCCTTTTTGACTTCAACATTTGGATTCATACTGACCACCCTA
GGGAGAGAAGCATGGGGAAGAGTCTTTACAAAAGATAGAGAAGTTCTGGAGCTAACAGCG
ACCGTTCTTCCCATTATTGGACTTTGTGAACTAGCTAATTGTCCACAGACAACATGTTGT
GGGGTTCTTCGGGGGAGTGCTAGGCCCGGTGTTGGTGCAGGTATTAACTTTTACTCGTTC
TATTTGATGGGAACACCAGTGGCCATCACTTTGGCCTTCGTTTGGAAGCTAGGATTTTTG
GGCCTTTGTTATGGGCTTCTAGCAGCTCAAGTGGCATGTGTAATCTCAATGTTAATAGTC
ACTTATAGTACTGATTGGGAAGGAGCATCATTGAAGGCAAAAGAACTAGTGGGAAGATCT
AATGAACTCCCATATGAAGATCAACTGGTAAAATTTGAGGAGGGTAATGGATTTCTCAAA
AGATTTAGCTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400020029
PEP Infomation

pacid=37439817 transcript=PGSC0003DMT400029424 locus=PGSC0003DMG400011312 ID=PGSC0003DMT400029424.v4.03 annot-version=v4.03
Sequence

MGLATYLKNMILVVCMGRLGSLELAGGALAIGFTNITGYSVLSGLALGMEPLSSQAFGSR
NLTLVSLALQRTIFMLLTASIPIAFLWFNFESLMLKLHQDSQIIHVASVFCRFAVPDLIA
NSFLHPLRIYLRCKGTTWPLLWCTSLATMLHFPITVYLTFTLSLGIQGIAISTFVSNFVT
LFFLLGYIFFTYDQNGSPSKPLAENVKLLPSISVGEQWIMLLQLAIPSCLAVCLEWWWYE
FMTVLAGYLDRPEVPLAASAIVIQTTSLMYTLPSALSASVSSRVGNELGAGRPAKARLAT
GIAIGLAFLTSTFGFILTTLGREAWGRVFTKDREVLELTATVLPIIGLCELANCPQTTCC
GVLRGSARPGVGAGINFYSFYLMGTPVAITLAFVWKLGFLGLCYGLLAAQVACVISMLIV
TYSTDWEGASLKAKELVGRSNELPYEDQLVKFEEGNGFLKRFSF*

Transcript Sequence

Transcript ID

PGSC0003DMT400029424
Transcript Infomation

pacid=37439817 locus=PGSC0003DMG400011312 ID=PGSC0003DMT400029424.v4.03 annot-version=v4.03
Sequence

ATGGGCTTGGCAACCTATTTGAAAAACATGATTTTAGTTGTGTGCATGGGAAGGCTGGGA
AGCTTGGAGCTGGCAGGGGGTGCACTGGCCATTGGCTTCACCAATATTACTGGTTACTCA
GTCTTGTCTGGCCTAGCCTTGGGGATGGAACCACTTTCTAGCCAGGCTTTTGGATCAAGA
AACTTAACTTTAGTGTCTCTTGCCCTCCAAAGGACAATCTTTATGTTATTAACTGCATCT
ATACCTATTGCCTTTTTATGGTTTAATTTTGAGTCTCTCATGCTAAAGCTACACCAAGAC
TCACAAATAATACATGTAGCAAGTGTATTTTGCAGATTTGCTGTCCCAGATCTTATTGCT
AACAGCTTTCTTCACCCTTTACGCATCTACTTACGGTGTAAAGGTACAACATGGCCTCTA
TTATGGTGTACTTCACTTGCAACAATGCTGCATTTCCCTATCACAGTTTACCTGACTTTT
ACTCTGAGTCTTGGGATCCAAGGAATTGCAATTTCAACCTTTGTCTCCAACTTTGTCACC
TTATTCTTCCTTTTAGGCTATATATTCTTTACTTATGACCAAAACGGATCTCCATCAAAA
CCCCTAGCAGAAAATGTAAAACTTCTTCCTTCCATTTCTGTGGGAGAACAATGGATAATG
CTTCTTCAACTTGCTATACCTAGCTGTTTAGCAGTTTGCTTAGAGTGGTGGTGGTATGAA
TTCATGACAGTTCTAGCCGGCTACCTTGACAGACCTGAAGTTCCACTTGCTGCATCTGCT
ATCGTTATACAAACCACATCCCTCATGTACACATTACCTTCGGCCCTAAGTGCTTCAGTC
TCAAGCAGGGTAGGGAATGAACTTGGAGCGGGACGGCCAGCTAAGGCCCGCTTGGCAACA
GGGATAGCCATAGGGCTGGCCTTTTTGACTTCAACATTTGGATTCATACTGACCACCCTA
GGGAGAGAAGCATGGGGAAGAGTCTTTACAAAAGATAGAGAAGTTCTGGAGCTAACAGCG
ACCGTTCTTCCCATTATTGGACTTTGTGAACTAGCTAATTGTCCACAGACAACATGTTGT
GGGGTTCTTCGGGGGAGTGCTAGGCCCGGTGTTGGTGCAGGTATTAACTTTTACTCGTTC
TATTTGATGGGAACACCAGTGGCCATCACTTTGGCCTTCGTTTGGAAGCTAGGATTTTTG
GGCCTTTGTTATGGGCTTCTAGCAGCTCAAGTGGCATGTGTAATCTCAATGTTAATAGTC
ACTTATAGTACTGATTGGGAAGGAGCATCATTGAAGGCAAAAGAACTAGTGGGAAGATCT
AATGAACTCCCATATGAAGATCAACTGGTAAAATTTGAGGAGGGTAATGGATTTCTCAAA
AGATTTAGCTTCTGA