Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029402
CDS Infomation

pacid=37480291 polypeptide=PGSC0003DMP400020015 locus=PGSC0003DMG402011297 ID=PGSC0003DMT400029402.v4.03 annot-version=v4.03
Sequence

ATGGGTGAAGCAGTGATGGCAGGTGAAGGACATGGTGAATGTTTGCCAAAAATGGTGCTT
AGGGTTTTATTGGTTGAAGCTGATGATTGCACTCGTCAGATTATTGCTGCTCTGCTTCGT
AAATGTGGTTATAGAGTTGCTGCTGTTCCTGATGGTTTGAAGGCATGGGAGACACTTAAG
GAAAGGCCTCATAACATAGACCTTGTATTGACTGAGGTTGAGCTGCCATCAATATCCGGA
TATGCACTGCTTACTTTAATTGTGGAGCATGACTTGTGCAAAAACATACCTGTTATAATG
ATGTCCTCCAAAGATTCCATTAGCACAGTCTTGAAATGCATGGTTAAAGGAGCTTCCGAC
TTTCTCATTAAGCCTTTAAGGAAAAATGAGCTGAGGAACTTGTGGCAGCATGTTTGGAGA
AGAAAAACGCAAAGTGCTAGGAGCCATCCTCGGAATGAAGTTGTTGAAAACCAGAAAATT
GTAGCAGCTTCTGAGAATGACACAGCAAGTAACTATTCTAGCGATAATCTGGCTTTTGTT
CATCGAGGAAATGGCAAAGGTTGCCAGTCACAAGGCGTTACAGATACTAGACATAAAGAT
GATTCAAATATGTGCAACGATGGAAGACATGAAGAATGTGTTGAAAGATCATTTATGCCA
GAAAGTAAACCACTAGAAAACATGACAAACTCTGGAATGGGAACTTCTTCCGGCACTACA
CCTGACAGCTCAGTTGCTATTGGTTCAGAAGATGCCACTCTTTGTGCTGAACCAAGGGTT
ACGGCTGATGAAGTGCAGCATGGATGTTTTAGTGCAAATACGTGTACTACTGATGAAGTT
GATTGCCAGTTGAATGAACTCTATTCTGCTCCTAATACTGCTGAAGCTATTGACTTGATG
GGGAATTTTGAAAATTACTTGGCTCACAGTGACGGCCATTCTCATGACAGTAGAGAAAAA
TCAAATCTCGCTTCCAGGCTGGATCTTTCTTTGAGAACCTTTAATCCCAGTTGCTTAAAC
GATGAAGCGTCGTGGGAGCAGAACATGATAAGTCATTCAAAAGCATCCGCCTTTTCTAAA
TATGAAAATAAGATGACGGTGCAACCTCTTTTCTCTGGATTGAGTAGCAATTCAGCTCCA
TTGAAGGAAGGCTCTAGTGCCTCTACTTGGCAGCATGATGCTTCATTGACTGAGAGTCAG
GAAAACGAAACAGCTCTGGTTATGCGCCAACCGGGAAATTGTAAAGTTTCACTATCGGGC
AACCAAGTAAGCTTCATTCCAGTTGACAAGGTAAGGTTTGGAAGTATGGCTGCCAGTGAC
ATTCACATAAATGCTTCAGTGTACAATACACAATCAGGTTCTCAACAAGTACACAGCCCT
CAATCACAGTCTACACTTCCAACAAGTTCTTTGACTTATTCAACTTCCGAAGGTCAAAAT
ATGGAGCATTACAAACAACCATTTGATGATACTACAGTTCACTCTGAGGATAATGCGGAA
GAAGAAGATAACAGAAATTTAGTAACAGTTGAAAAGGCAAGATATGATACTGCAATTTGT
GAATCTAGTGATTTGGGAAGTGGCGTGAAAAATAAGCTCAGTAGCTCTCATTGTGGAAGT
ATTTCTGATGAAGCTGTAGAAAGTTCCTTTCCAGTTGCAAGTCCAGAGAGAGCTCCTGTT
TCTGAGAGTGTGAATTACAATGATAAGACAAGATCAGAGAATCACAGCACCAGCCAAAGG
GAAGCAGCGCTCATGAAGTTTCGGTTAAAACGGAAGGATAGGTGCTATGAGAAAAAGGTT
CGATACGAAAGCAGGAAAAGACTTGCAGAGCAGCGACCACGAGTGAAAGGACAGTTTGTT
CGTCAGCCACAAAACGGAACTCAGCCCAAGGACAAAGACGAAATGCCAATAGTCCATCAA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400020015
PEP Infomation

pacid=37480291 transcript=PGSC0003DMT400029402 locus=PGSC0003DMG402011297 ID=PGSC0003DMT400029402.v4.03 annot-version=v4.03
Sequence

MGEAVMAGEGHGECLPKMVLRVLLVEADDCTRQIIAALLRKCGYRVAAVPDGLKAWETLK
ERPHNIDLVLTEVELPSISGYALLTLIVEHDLCKNIPVIMMSSKDSISTVLKCMVKGASD
FLIKPLRKNELRNLWQHVWRRKTQSARSHPRNEVVENQKIVAASENDTASNYSSDNLAFV
HRGNGKGCQSQGVTDTRHKDDSNMCNDGRHEECVERSFMPESKPLENMTNSGMGTSSGTT
PDSSVAIGSEDATLCAEPRVTADEVQHGCFSANTCTTDEVDCQLNELYSAPNTAEAIDLM
GNFENYLAHSDGHSHDSREKSNLASRLDLSLRTFNPSCLNDEASWEQNMISHSKASAFSK
YENKMTVQPLFSGLSSNSAPLKEGSSASTWQHDASLTESQENETALVMRQPGNCKVSLSG
NQVSFIPVDKVRFGSMAASDIHINASVYNTQSGSQQVHSPQSQSTLPTSSLTYSTSEGQN
MEHYKQPFDDTTVHSEDNAEEEDNRNLVTVEKARYDTAICESSDLGSGVKNKLSSSHCGS
ISDEAVESSFPVASPERAPVSESVNYNDKTRSENHSTSQREAALMKFRLKRKDRCYEKKV
RYESRKRLAEQRPRVKGQFVRQPQNGTQPKDKDEMPIVHQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400029402
Transcript Infomation

pacid=37480291 locus=PGSC0003DMG402011297 ID=PGSC0003DMT400029402.v4.03 annot-version=v4.03
Sequence

ATGGGTGAAGCAGTGATGGCAGGTGAAGGACATGGTGAATGTTTGCCAAAAATGGTGCTT
AGGGTTTTATTGGTTGAAGCTGATGATTGCACTCGTCAGATTATTGCTGCTCTGCTTCGT
AAATGTGGTTATAGAGTTGCTGCTGTTCCTGATGGTTTGAAGGCATGGGAGACACTTAAG
GAAAGGCCTCATAACATAGACCTTGTATTGACTGAGGTTGAGCTGCCATCAATATCCGGA
TATGCACTGCTTACTTTAATTGTGGAGCATGACTTGTGCAAAAACATACCTGTTATAATG
ATGTCCTCCAAAGATTCCATTAGCACAGTCTTGAAATGCATGGTTAAAGGAGCTTCCGAC
TTTCTCATTAAGCCTTTAAGGAAAAATGAGCTGAGGAACTTGTGGCAGCATGTTTGGAGA
AGAAAAACGCAAAGTGCTAGGAGCCATCCTCGGAATGAAGTTGTTGAAAACCAGAAAATT
GTAGCAGCTTCTGAGAATGACACAGCAAGTAACTATTCTAGCGATAATCTGGCTTTTGTT
CATCGAGGAAATGGCAAAGGTTGCCAGTCACAAGGCGTTACAGATACTAGACATAAAGAT
GATTCAAATATGTGCAACGATGGAAGACATGAAGAATGTGTTGAAAGATCATTTATGCCA
GAAAGTAAACCACTAGAAAACATGACAAACTCTGGAATGGGAACTTCTTCCGGCACTACA
CCTGACAGCTCAGTTGCTATTGGTTCAGAAGATGCCACTCTTTGTGCTGAACCAAGGGTT
ACGGCTGATGAAGTGCAGCATGGATGTTTTAGTGCAAATACGTGTACTACTGATGAAGTT
GATTGCCAGTTGAATGAACTCTATTCTGCTCCTAATACTGCTGAAGCTATTGACTTGATG
GGGAATTTTGAAAATTACTTGGCTCACAGTGACGGCCATTCTCATGACAGTAGAGAAAAA
TCAAATCTCGCTTCCAGGCTGGATCTTTCTTTGAGAACCTTTAATCCCAGTTGCTTAAAC
GATGAAGCGTCGTGGGAGCAGAACATGATAAGTCATTCAAAAGCATCCGCCTTTTCTAAA
TATGAAAATAAGATGACGGTGCAACCTCTTTTCTCTGGATTGAGTAGCAATTCAGCTCCA
TTGAAGGAAGGCTCTAGTGCCTCTACTTGGCAGCATGATGCTTCATTGACTGAGAGTCAG
GAAAACGAAACAGCTCTGGTTATGCGCCAACCGGGAAATTGTAAAGTTTCACTATCGGGC
AACCAAGTAAGCTTCATTCCAGTTGACAAGGTAAGGTTTGGAAGTATGGCTGCCAGTGAC
ATTCACATAAATGCTTCAGTGTACAATACACAATCAGGTTCTCAACAAGTACACAGCCCT
CAATCACAGTCTACACTTCCAACAAGTTCTTTGACTTATTCAACTTCCGAAGGTCAAAAT
ATGGAGCATTACAAACAACCATTTGATGATACTACAGTTCACTCTGAGGATAATGCGGAA
GAAGAAGATAACAGAAATTTAGTAACAGTTGAAAAGGCAAGATATGATACTGCAATTTGT
GAATCTAGTGATTTGGGAAGTGGCGTGAAAAATAAGCTCAGTAGCTCTCATTGTGGAAGT
ATTTCTGATGAAGCTGTAGAAAGTTCCTTTCCAGTTGCAAGTCCAGAGAGAGCTCCTGTT
TCTGAGAGTGTGAATTACAATGATAAGACAAGATCAGAGAATCACAGCACCAGCCAAAGG
GAAGCAGCGCTCATGAAGTTTCGGTTAAAACGGAAGGATAGGTGCTATGAGAAAAAGGTT
CGATACGAAAGCAGGAAAAGACTTGCAGAGCAGCGACCACGAGTGAAAGGACAGTTTGTT
CGTCAGCCACAAAACGGAACTCAGCCCAAGGACAAAGACGAAATGCCAATAGTCCATCAA
TGA