Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029389
CDS Infomation

pacid=37477947 polypeptide=PGSC0003DMP400020004 locus=PGSC0003DMG402011292 ID=PGSC0003DMT400029389.v4.03 annot-version=v4.03
Sequence

ATGGAGACTCTGAGAGTACAATTATTGGCTGAAAAAGGTGAGATCTCAGTACCATCACAG
TACGTACAACCACCGGAAACCAGACCACAAATAGAAAAAACTAACGTAAAAGCAGCTGTA
CCAGTAATCGATCTCAGTTCACGAACGAACCTTCTCGATGAACTGAAGAAAGCGTGCAAA
GAATGGGGAGCATTTCAAGTGATAAACCATAAGGTTCCGATTAGTTTGTTGGATGATATG
AGGCGTGTTGGTCGCACTTTTTTTGAAGGTCGCACAATGGAAGAGAAGCTTAAGTATTCT
TGTGATTCTGCTTCTCCTGCTTCTGAAGGATATGGCAGTCGCATGCTTGTAGCATCAAAT
GACACGGTTTTGGATTGGAGAGATTATTTCGATCACCACACTTTGCCTTCATCTCGTCGC
AATCCTTCTCATTGGCCCGAGTCTCCGGCCGATTACAGAAAAGTTGTGGCAGAATACAGC
GATCACATGAAAGCTCTCGCACAGGAACTTCTTGGTTTAGTCTCTGAGAGTCTAGACTTG
ACATGTCAGTGCATAGAAAATGTTGTTGGGGAGTTTTACCAAAATATCACTATTAGTTAC
TATCCACCCTGCCCTCAACCGGAGCTTACTCTTGGACTGCAATCACATTCTGACTTTGGT
GCTATTACACTTCTCATCCAAGATGACGTGGGGGGTCTTGAGGTTTTCAATAATGGAGAA
TGGGTTTCTGTAAATCCAATGTCAAATGCTATCTGTGTGATCTTAGCAGACCAAACTGAG
ATCATAACTAATGGCGAGTACAAAAGTGCTCAACACCGGGCAGTGACGAATGCTGGAAGA
TCCAGACTCTCAGTTGCCACATTCCATGACCCTGCCAAGACTAGGCAAATTTCTCCAGCC
CTCCATCCACCTAGATATCGTCCGGTGATTTATGGCGACTATGTCTCCTCATGGTACACT
AAAGGGCCAGAAGGGAAGAGGAACCTTGATGCACTTCTACTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400020004
PEP Infomation

pacid=37477947 transcript=PGSC0003DMT400029389 locus=PGSC0003DMG402011292 ID=PGSC0003DMT400029389.v4.03 annot-version=v4.03
Sequence

METLRVQLLAEKGEISVPSQYVQPPETRPQIEKTNVKAAVPVIDLSSRTNLLDELKKACK
EWGAFQVINHKVPISLLDDMRRVGRTFFEGRTMEEKLKYSCDSASPASEGYGSRMLVASN
DTVLDWRDYFDHHTLPSSRRNPSHWPESPADYRKVVAEYSDHMKALAQELLGLVSESLDL
TCQCIENVVGEFYQNITISYYPPCPQPELTLGLQSHSDFGAITLLIQDDVGGLEVFNNGE
WVSVNPMSNAICVILADQTEIITNGEYKSAQHRAVTNAGRSRLSVATFHDPAKTRQISPA
LHPPRYRPVIYGDYVSSWYTKGPEGKRNLDALLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400029389
Transcript Infomation

pacid=37477947 locus=PGSC0003DMG402011292 ID=PGSC0003DMT400029389.v4.03 annot-version=v4.03
Sequence

ATGGAGACTCTGAGAGTACAATTATTGGCTGAAAAAGGTGAGATCTCAGTACCATCACAG
TACGTACAACCACCGGAAACCAGACCACAAATAGAAAAAACTAACGTAAAAGCAGCTGTA
CCAGTAATCGATCTCAGTTCACGAACGAACCTTCTCGATGAACTGAAGAAAGCGTGCAAA
GAATGGGGAGCATTTCAAGTGATAAACCATAAGGTTCCGATTAGTTTGTTGGATGATATG
AGGCGTGTTGGTCGCACTTTTTTTGAAGGTCGCACAATGGAAGAGAAGCTTAAGTATTCT
TGTGATTCTGCTTCTCCTGCTTCTGAAGGATATGGCAGTCGCATGCTTGTAGCATCAAAT
GACACGGTTTTGGATTGGAGAGATTATTTCGATCACCACACTTTGCCTTCATCTCGTCGC
AATCCTTCTCATTGGCCCGAGTCTCCGGCCGATTACAGAAAAGTTGTGGCAGAATACAGC
GATCACATGAAAGCTCTCGCACAGGAACTTCTTGGTTTAGTCTCTGAGAGTCTAGACTTG
ACATGTCAGTGCATAGAAAATGTTGTTGGGGAGTTTTACCAAAATATCACTATTAGTTAC
TATCCACCCTGCCCTCAACCGGAGCTTACTCTTGGACTGCAATCACATTCTGACTTTGGT
GCTATTACACTTCTCATCCAAGATGACGTGGGGGGTCTTGAGGTTTTCAATAATGGAGAA
TGGGTTTCTGTAAATCCAATGTCAAATGCTATCTGTGTGATCTTAGCAGACCAAACTGAG
ATCATAACTAATGGCGAGTACAAAAGTGCTCAACACCGGGCAGTGACGAATGCTGGAAGA
TCCAGACTCTCAGTTGCCACATTCCATGACCCTGCCAAGACTAGGCAAATTTCTCCAGCC
CTCCATCCACCTAGATATCGTCCGGTGATTTATGGCGACTATGTCTCCTCATGGTACACT
AAAGGGCCAGAAGGGAAGAGGAACCTTGATGCACTTCTACTTTAA