Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029359
CDS Infomation

pacid=37478749 polypeptide=PGSC0003DMP400019980 locus=PGSC0003DMG400011280 ID=PGSC0003DMT400029359.v4.03 annot-version=v4.03
Sequence

ATGATTTGTTCTTCTAGCCTACGCTTGTCCGGTTCCGGCACCGGCACCAGAAACAGTCCA
TCTCCACCGGCGAGTTCTGAAAATTCCGATGAATCTCAGTCGCAGGTGCGAAGGATTAAA
GCCAGCCCTCAGCTAAACCGGTGGTCCAGAGCTCGAAGCATCCGGTCCGGCAGGAAACTA
GACCGGTCTGCTGTTAGTTACACTGAATCACGCGACAAGTCCGGTTCACCGGAAATTGAG
TTGCCTATGTCTCCTAAAGGTGATAGCCGGTCCGGCTCGTCAGACGATGAAAAAGAGGTT
AACGGAGGAAAACCGATATTTATGGTGTCTGATGGAACTGGATGGACGGCGGAGCACGCC
GTTAACGCAGCTTTAGGACAATTTGATTATTGCTTAGTCGATCGCGTTTGCCCTGTGAAT
ACTCACTTGTTCTCTGGGATTGATGATGTTGAAAAATTAATGGAGATAGTGAAGCAAGCA
GCCAAAGAAGGGGCAATGGTTGTCTTTACTTTAGCTGAGCCTTCCATGGCTCAATTTGCC
AAACAAGCATGTCAACACTGGGGTGTAGCATCTAGTGATATACTGGGGCCAATTACAGAG
GCAATTGCTGGCCATCTTGGTGTTTCACCTTCTGGCCTCTCTCGTTGGGCTCCTGAGAGG
CAGAAATCTCCTCTCAGCGAGGAATACTTCCGGAGGATTGAAGCAATTGAATTTACCATA
AAGCAAGATGATGGTGCCTTGCCGCGAAACCTGCATATGGCGGATATAGTTCTAACCGGT
GTTTCACGAAGTGGGAAGACACCGCTATCTATTTATTTAGCACAGAAAGGATATAAAGTA
GCTAATGTACCCATTGTCATGAATATAGACTTACCCAATACACTGTTTGAAGTTAACCCC
GAAAAGGTTTTTGCTTTGACAATAAATCCCGTTGTTCTGCAATCCATCAGAAGAGCAAGA
GCTAAGACTCTGGGTATGGATGGAGAACTGAAGACCAACTATTGTGACATGGATTACGTG
AAAGAAGAGTTGGAATATGCAGGGAAAATTTTTGCGCAAAACCCTGTCTGGCCAGTAATA
GAAGTTACGTCTAAAGCTATTGAAGAAACAGCTGTTATTGTTCTGAGACTTTACCACGAC
AGAAAGAACAGGTGTTCAATGCCAAGAATTTCCAAACGCTATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400019980
PEP Infomation

pacid=37478749 transcript=PGSC0003DMT400029359 locus=PGSC0003DMG400011280 ID=PGSC0003DMT400029359.v4.03 annot-version=v4.03
Sequence

MICSSSLRLSGSGTGTRNSPSPPASSENSDESQSQVRRIKASPQLNRWSRARSIRSGRKL
DRSAVSYTESRDKSGSPEIELPMSPKGDSRSGSSDDEKEVNGGKPIFMVSDGTGWTAEHA
VNAALGQFDYCLVDRVCPVNTHLFSGIDDVEKLMEIVKQAAKEGAMVVFTLAEPSMAQFA
KQACQHWGVASSDILGPITEAIAGHLGVSPSGLSRWAPERQKSPLSEEYFRRIEAIEFTI
KQDDGALPRNLHMADIVLTGVSRSGKTPLSIYLAQKGYKVANVPIVMNIDLPNTLFEVNP
EKVFALTINPVVLQSIRRARAKTLGMDGELKTNYCDMDYVKEELEYAGKIFAQNPVWPVI
EVTSKAIEETAVIVLRLYHDRKNRCSMPRISKRY*

Transcript Sequence

Transcript ID

PGSC0003DMT400029359
Transcript Infomation

pacid=37478749 locus=PGSC0003DMG400011280 ID=PGSC0003DMT400029359.v4.03 annot-version=v4.03
Sequence

ATGATTTGTTCTTCTAGCCTACGCTTGTCCGGTTCCGGCACCGGCACCAGAAACAGTCCA
TCTCCACCGGCGAGTTCTGAAAATTCCGATGAATCTCAGTCGCAGGTGCGAAGGATTAAA
GCCAGCCCTCAGCTAAACCGGTGGTCCAGAGCTCGAAGCATCCGGTCCGGCAGGAAACTA
GACCGGTCTGCTGTTAGTTACACTGAATCACGCGACAAGTCCGGTTCACCGGAAATTGAG
TTGCCTATGTCTCCTAAAGGTGATAGCCGGTCCGGCTCGTCAGACGATGAAAAAGAGGTT
AACGGAGGAAAACCGATATTTATGGTGTCTGATGGAACTGGATGGACGGCGGAGCACGCC
GTTAACGCAGCTTTAGGACAATTTGATTATTGCTTAGTCGATCGCGTTTGCCCTGTGAAT
ACTCACTTGTTCTCTGGGATTGATGATGTTGAAAAATTAATGGAGATAGTGAAGCAAGCA
GCCAAAGAAGGGGCAATGGTTGTCTTTACTTTAGCTGAGCCTTCCATGGCTCAATTTGCC
AAACAAGCATGTCAACACTGGGGTGTAGCATCTAGTGATATACTGGGGCCAATTACAGAG
GCAATTGCTGGCCATCTTGGTGTTTCACCTTCTGGCCTCTCTCGTTGGGCTCCTGAGAGG
CAGAAATCTCCTCTCAGCGAGGAATACTTCCGGAGGATTGAAGCAATTGAATTTACCATA
AAGCAAGATGATGGTGCCTTGCCGCGAAACCTGCATATGGCGGATATAGTTCTAACCGGT
GTTTCACGAAGTGGGAAGACACCGCTATCTATTTATTTAGCACAGAAAGGATATAAAGTA
GCTAATGTACCCATTGTCATGAATATAGACTTACCCAATACACTGTTTGAAGTTAACCCC
GAAAAGGTTTTTGCTTTGACAATAAATCCCGTTGTTCTGCAATCCATCAGAAGAGCAAGA
GCTAAGACTCTGGGTATGGATGGAGAACTGAAGACCAACTATTGTGACATGGATTACGTG
AAAGAAGAGTTGGAATATGCAGGGAAAATTTTTGCGCAAAACCCTGTCTGGCCAGTAATA
GAAGTTACGTCTAAAGCTATTGAAGAAACAGCTGTTATTGTTCTGAGACTTTACCACGAC
AGAAAGAACAGGTGTTCAATGCCAAGAATTTCCAAACGCTATTAA