Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029352
CDS Infomation

pacid=37477267 polypeptide=PGSC0003DMP400019976 locus=PGSC0003DMG400011278 ID=PGSC0003DMT400029352.v4.03 annot-version=v4.03
Sequence

ATGACTATTGATGATTCAAGCATAATTTCAACTCCAACCAGGCTAGAGGGAAAATATAGT
GGAATGGTGGTATGTTGGATTCTTGGACTTGGGTCACTTGTTTCTTGGAATAGTATGCTA
ACAATTGGAGATTATTATTATCAACTTTTTCCTAAATACCATCCTTCAAGGGTGCTTACC
CTCGTTTATCAGCCGTTTGCACTCGCGACAATGGCAATTCTTGTATATAATGAGGCAAGA
ATCAATACACGAAAACGCAACCTAACTGGATTCACTCTTTTCTTCTTAAGCACATTCGCG
CTCCTAGTGTTGGATTTGGCTACGTCAGGAGCTGGCGGTCTTGGAAATTACATTGGTATA
TGTGCTATAGTCGCGGCTTTTGGAGTTGCTGATGCTTTTGTTGAAGGTGGAATGGTAGGA
GATTTATCCTTCATGTGCCCTGAATTCATCCAATCATACTTAGCCGGTCTGGCTGCGTCT
GGGGCTCTCACCTCGGCTTTAAGGCTAGTGACTAAAGCAGCTTTTGAAAGGGCTAGTAAT
GGTCTTCGCAAAGGAGTTATGTTGTTTCTGGCTATCTCCACATTCTTTGAATTTCTATGC
ATTCTTCTATATGCTTTCGTCTTTCCTAAGCTACCAATCGTTAAGTACTACCGCACAAAG
GCAGCAGCAGAGGGATCAAAAACTGTTGCAGCAGACTTAGCTGCAGCAGGTATCCAAACT
GAAGCAACCGAAAGAGCTGGTGCTAACGCTAAACAATTGGAGCGCCTGAGCAACAAACAG
CTGTTCTTTCAGAACATCGATTACTTATTGGATTTGTTCTTGATTTATGTCCTGACTTTA
TCAATTTTCCCTGGATTCTTGTACGAGAATACTGGTTCACACAAATTAGGTTCATGGTAT
GCTTTAGTCTTGATAGCAGTTTACAACATGTTCGATTTGATAGCAAGATACATTCCATTG
ATAGAGAAAATCAAGTTGAAATCACGAAAGGGCCTAATGATCGCAACACTATCTCGTTTC
TTGTTCATTCCTTGTTTCTACTTCACTGCAAAATACGGTGATCAAGGCTGGATGATAATG
CTCGTGTCCTTCCTCGGACTCACCAATGGTTATCTCACCGTTTGTGTCCTCACAGTTGCT
CCTCAGGGATACAAGGGTCCTGAGCAAAATGCATTGGGCAACTTGCTAGTGTTATGTCTA
CTTGCTGGACTATTCTCTGGTGTTGCACTGGATTGGTTGTGGATTATTGGTAATGGCAAA
TTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400019976
PEP Infomation

pacid=37477267 transcript=PGSC0003DMT400029352 locus=PGSC0003DMG400011278 ID=PGSC0003DMT400029352.v4.03 annot-version=v4.03
Sequence

MTIDDSSIISTPTRLEGKYSGMVVCWILGLGSLVSWNSMLTIGDYYYQLFPKYHPSRVLT
LVYQPFALATMAILVYNEARINTRKRNLTGFTLFFLSTFALLVLDLATSGAGGLGNYIGI
CAIVAAFGVADAFVEGGMVGDLSFMCPEFIQSYLAGLAASGALTSALRLVTKAAFERASN
GLRKGVMLFLAISTFFEFLCILLYAFVFPKLPIVKYYRTKAAAEGSKTVAADLAAAGIQT
EATERAGANAKQLERLSNKQLFFQNIDYLLDLFLIYVLTLSIFPGFLYENTGSHKLGSWY
ALVLIAVYNMFDLIARYIPLIEKIKLKSRKGLMIATLSRFLFIPCFYFTAKYGDQGWMIM
LVSFLGLTNGYLTVCVLTVAPQGYKGPEQNALGNLLVLCLLAGLFSGVALDWLWIIGNGK
F*

Transcript Sequence

Transcript ID

PGSC0003DMT400029352
Transcript Infomation

pacid=37477267 locus=PGSC0003DMG400011278 ID=PGSC0003DMT400029352.v4.03 annot-version=v4.03
Sequence

ATGACTATTGATGATTCAAGCATAATTTCAACTCCAACCAGGCTAGAGGGAAAATATAGT
GGAATGGTGGTATGTTGGATTCTTGGACTTGGGTCACTTGTTTCTTGGAATAGTATGCTA
ACAATTGGAGATTATTATTATCAACTTTTTCCTAAATACCATCCTTCAAGGGTGCTTACC
CTCGTTTATCAGCCGTTTGCACTCGCGACAATGGCAATTCTTGTATATAATGAGGCAAGA
ATCAATACACGAAAACGCAACCTAACTGGATTCACTCTTTTCTTCTTAAGCACATTCGCG
CTCCTAGTGTTGGATTTGGCTACGTCAGGAGCTGGCGGTCTTGGAAATTACATTGGTATA
TGTGCTATAGTCGCGGCTTTTGGAGTTGCTGATGCTTTTGTTGAAGGTGGAATGGTAGGA
GATTTATCCTTCATGTGCCCTGAATTCATCCAATCATACTTAGCCGGTCTGGCTGCGTCT
GGGGCTCTCACCTCGGCTTTAAGGCTAGTGACTAAAGCAGCTTTTGAAAGGGCTAGTAAT
GGTCTTCGCAAAGGAGTTATGTTGTTTCTGGCTATCTCCACATTCTTTGAATTTCTATGC
ATTCTTCTATATGCTTTCGTCTTTCCTAAGCTACCAATCGTTAAGTACTACCGCACAAAG
GCAGCAGCAGAGGGATCAAAAACTGTTGCAGCAGACTTAGCTGCAGCAGGTATCCAAACT
GAAGCAACCGAAAGAGCTGGTGCTAACGCTAAACAATTGGAGCGCCTGAGCAACAAACAG
CTGTTCTTTCAGAACATCGATTACTTATTGGATTTGTTCTTGATTTATGTCCTGACTTTA
TCAATTTTCCCTGGATTCTTGTACGAGAATACTGGTTCACACAAATTAGGTTCATGGTAT
GCTTTAGTCTTGATAGCAGTTTACAACATGTTCGATTTGATAGCAAGATACATTCCATTG
ATAGAGAAAATCAAGTTGAAATCACGAAAGGGCCTAATGATCGCAACACTATCTCGTTTC
TTGTTCATTCCTTGTTTCTACTTCACTGCAAAATACGGTGATCAAGGCTGGATGATAATG
CTCGTGTCCTTCCTCGGACTCACCAATGGTTATCTCACCGTTTGTGTCCTCACAGTTGCT
CCTCAGGGATACAAGGGTCCTGAGCAAAATGCATTGGGCAACTTGCTAGTGTTATGTCTA
CTTGCTGGACTATTCTCTGGTGTTGCACTGGATTGGTTGTGGATTATTGGTAATGGCAAA
TTCTAA