Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029328
CDS Infomation

pacid=37478394 polypeptide=PGSC0003DMP400019959 locus=PGSC0003DMG400011271 ID=PGSC0003DMT400029328.v4.03 annot-version=v4.03
Sequence

ATGGCCGGGTTCAATGATCATGTTGCTAGTGGACATTGGATACCACCTAGCCCTAGCCCG
AGCCCGAGCTCAAGAGCACTCATCTCTTCACTGCTAGCTGATGATTTTGGATGGTCAGCT
CATCTGGAGGAAACTAATGAAAGTAGAAACCTCGTTGTCAAGCCTCAAGAGCATGTCACC
TGGTGCAACTCTGATGGGGCACAAACTGGTGCAATGACTGATCAAACAGTGAATGTGAGT
GCACCATCAGAACAGAACACGAGTTCACGTGGAGGGCTCATGGAAAGAATGGTAGCTAGA
ACTGGATTTAACGTCCCGAGGCTGAATACAGATGGTCTTAGACCTCCTTTTGTGTCACAG
AATCAAGAAGTTAAGTCTCCTTATTTGAGTATTGCTGCTGGTCTCAGTCCATCAATCCTC
TTATATTCACCTGTTTTGCTCTATAATCCACTGGTTTATCCATCTCCTACAACTGGACTA
TTACCATGTGCCTCAGGCAACGAGAGTAGAAGTGTTATGTTGACGACTGAAGCTGCAGAT
AAGAGGAATGAGACTGCTTTAGGGACTAATAGTTCATCTTCCCTGTCTTTCAATCCAATT
ATGGAGACTGGCGGAGTAAACGAGTTTAGTCAAATTGAGGGTTCAGTTCATCCAAATAAC
TCTCTTCAACTTCATAGTATGGAAGCAACTCAAAATGAACAGATATGTCATGAAACAACT
GATTTCCCTATGTTTACTGAAGAGGATGTCCGGGGTAGTGATAAAAATCCAGAGATAAGG
ACCTTTAATGCAGTTGGTGGTAGTACGGAGCATTCTCCGTCTCTTGAAGAGCAACAAGAT
GAGGACAGTACTGATGGTGATTCTTCAGTTGAAGATGGTTATAATTGGATAAAATATGGG
GAAAATCAAGCTAAAGGAAGTGAGTATCCTCGGAGTTTTTATAAGTGCACACATCCAAAT
TGTCTTGTCAAGAAGGAAAGAGCGCGATATCATAAAGGTCATGTCACGGAAATTATATAC
AATGGGGCTCACAATCACCCAAAACCACTGCCAAATCAGATATCAACCCTCGGATCTTCA
AGTTCATTTGGTGACATGCAACTAGACAATGTGGATCCAACTGGAACAGGTGTTAACAGT
GAGCTGGCTTTGGAAATCATCCAACAAGGACCTACTGCTGGAGGCCTCGAGTGGAAGAAC
GACAATCTTGAAGCAACGTCATTAGCAGATTTGCACTCTGAATACTGCAGGGGAGCTGCC
ACTTTACATTCAAATGATGCTCCACTGGGATCAGCGGATGCAGTTGACATATCATCTGCT
TTTACAACTGACGGAGATGATCATGGTACTCGTGGCAGTGCATCTCTAGATTGTGAAGAT
GGAGGAGATGAGTCCGAGTCTAAAATAAGGAAGATAGAACCGGATGCAACAGATACGAGA
AGCGTCAGCAGATCAATCAGGCAGCCAAGAATTGTGGTACAAACTATCAGTGAGGTAGAT
GTCCTTGATGATGGATATCGCTGGCGCAAGTATGGGCAAAAGGTGGTTAAAGGCAATCCA
AATCCTAGGAGTTACTACAAGTGCACAAACCCCGGCTGCAATGTCAGGAAACATGTCGAG
AGGGCCCCATTAGATCAGAGGTCTGTTATCACCACTTATGATGGGAAGCACAACCATGAC
GTTCCAGCAGAACGCAGCAGTAGCCAAGTTATCTCAGGTGCTTCAAACTCTCGCTCCAAC
CCGATAACTACTAATGCTCAAGACCAGGTAGGTAGGCCTGAGCCTAAACAACTTCAGAAG
ACCAGCAAGCGTTATGGAAGGGCTCCCTCATTTGGTCCTACCTCAGGATCTAACAGTTTC
GAAACTAACCAGCAGCAAGGTCTAACCGATCTTTCTATGACCGGATTCAACTCTGATCAG
CACCAGTTTTCAGTCCCTTCCCATCCATATACAGGATGGCTACAACCTGTTAACGATGCT
GGTTTCGTGCTTCCAGAAGGAGAACCAATGCCAGATCCTAATATGAACTACTCCAATGCC
TCATCAACTTATCAGCAAACTATGAATGGATTGCCTCCTGGACCTCAGATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019959
PEP Infomation

pacid=37478394 transcript=PGSC0003DMT400029328 locus=PGSC0003DMG400011271 ID=PGSC0003DMT400029328.v4.03 annot-version=v4.03
Sequence

MAGFNDHVASGHWIPPSPSPSPSSRALISSLLADDFGWSAHLEETNESRNLVVKPQEHVT
WCNSDGAQTGAMTDQTVNVSAPSEQNTSSRGGLMERMVARTGFNVPRLNTDGLRPPFVSQ
NQEVKSPYLSIAAGLSPSILLYSPVLLYNPLVYPSPTTGLLPCASGNESRSVMLTTEAAD
KRNETALGTNSSSSLSFNPIMETGGVNEFSQIEGSVHPNNSLQLHSMEATQNEQICHETT
DFPMFTEEDVRGSDKNPEIRTFNAVGGSTEHSPSLEEQQDEDSTDGDSSVEDGYNWIKYG
ENQAKGSEYPRSFYKCTHPNCLVKKERARYHKGHVTEIIYNGAHNHPKPLPNQISTLGSS
SSFGDMQLDNVDPTGTGVNSELALEIIQQGPTAGGLEWKNDNLEATSLADLHSEYCRGAA
TLHSNDAPLGSADAVDISSAFTTDGDDHGTRGSASLDCEDGGDESESKIRKIEPDATDTR
SVSRSIRQPRIVVQTISEVDVLDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCNVRKHVE
RAPLDQRSVITTYDGKHNHDVPAERSSSQVISGASNSRSNPITTNAQDQVGRPEPKQLQK
TSKRYGRAPSFGPTSGSNSFETNQQQGLTDLSMTGFNSDQHQFSVPSHPYTGWLQPVNDA
GFVLPEGEPMPDPNMNYSNASSTYQQTMNGLPPGPQM*

Transcript Sequence

Transcript ID

PGSC0003DMT400029328
Transcript Infomation

pacid=37478394 locus=PGSC0003DMG400011271 ID=PGSC0003DMT400029328.v4.03 annot-version=v4.03
Sequence

ATGGCCGGGTTCAATGATCATGTTGCTAGTGGACATTGGATACCACCTAGCCCTAGCCCG
AGCCCGAGCTCAAGAGCACTCATCTCTTCACTGCTAGCTGATGATTTTGGATGGTCAGCT
CATCTGGAGGAAACTAATGAAAGTAGAAACCTCGTTGTCAAGCCTCAAGAGCATGTCACC
TGGTGCAACTCTGATGGGGCACAAACTGGTGCAATGACTGATCAAACAGTGAATGTGAGT
GCACCATCAGAACAGAACACGAGTTCACGTGGAGGGCTCATGGAAAGAATGGTAGCTAGA
ACTGGATTTAACGTCCCGAGGCTGAATACAGATGGTCTTAGACCTCCTTTTGTGTCACAG
AATCAAGAAGTTAAGTCTCCTTATTTGAGTATTGCTGCTGGTCTCAGTCCATCAATCCTC
TTATATTCACCTGTTTTGCTCTATAATCCACTGGTTTATCCATCTCCTACAACTGGACTA
TTACCATGTGCCTCAGGCAACGAGAGTAGAAGTGTTATGTTGACGACTGAAGCTGCAGAT
AAGAGGAATGAGACTGCTTTAGGGACTAATAGTTCATCTTCCCTGTCTTTCAATCCAATT
ATGGAGACTGGCGGAGTAAACGAGTTTAGTCAAATTGAGGGTTCAGTTCATCCAAATAAC
TCTCTTCAACTTCATAGTATGGAAGCAACTCAAAATGAACAGATATGTCATGAAACAACT
GATTTCCCTATGTTTACTGAAGAGGATGTCCGGGGTAGTGATAAAAATCCAGAGATAAGG
ACCTTTAATGCAGTTGGTGGTAGTACGGAGCATTCTCCGTCTCTTGAAGAGCAACAAGAT
GAGGACAGTACTGATGGTGATTCTTCAGTTGAAGATGGTTATAATTGGATAAAATATGGG
GAAAATCAAGCTAAAGGAAGTGAGTATCCTCGGAGTTTTTATAAGTGCACACATCCAAAT
TGTCTTGTCAAGAAGGAAAGAGCGCGATATCATAAAGGTCATGTCACGGAAATTATATAC
AATGGGGCTCACAATCACCCAAAACCACTGCCAAATCAGATATCAACCCTCGGATCTTCA
AGTTCATTTGGTGACATGCAACTAGACAATGTGGATCCAACTGGAACAGGTGTTAACAGT
GAGCTGGCTTTGGAAATCATCCAACAAGGACCTACTGCTGGAGGCCTCGAGTGGAAGAAC
GACAATCTTGAAGCAACGTCATTAGCAGATTTGCACTCTGAATACTGCAGGGGAGCTGCC
ACTTTACATTCAAATGATGCTCCACTGGGATCAGCGGATGCAGTTGACATATCATCTGCT
TTTACAACTGACGGAGATGATCATGGTACTCGTGGCAGTGCATCTCTAGATTGTGAAGAT
GGAGGAGATGAGTCCGAGTCTAAAATAAGGAAGATAGAACCGGATGCAACAGATACGAGA
AGCGTCAGCAGATCAATCAGGCAGCCAAGAATTGTGGTACAAACTATCAGTGAGGTAGAT
GTCCTTGATGATGGATATCGCTGGCGCAAGTATGGGCAAAAGGTGGTTAAAGGCAATCCA
AATCCTAGGAGTTACTACAAGTGCACAAACCCCGGCTGCAATGTCAGGAAACATGTCGAG
AGGGCCCCATTAGATCAGAGGTCTGTTATCACCACTTATGATGGGAAGCACAACCATGAC
GTTCCAGCAGAACGCAGCAGTAGCCAAGTTATCTCAGGTGCTTCAAACTCTCGCTCCAAC
CCGATAACTACTAATGCTCAAGACCAGGTAGGTAGGCCTGAGCCTAAACAACTTCAGAAG
ACCAGCAAGCGTTATGGAAGGGCTCCCTCATTTGGTCCTACCTCAGGATCTAACAGTTTC
GAAACTAACCAGCAGCAAGGTCTAACCGATCTTTCTATGACCGGATTCAACTCTGATCAG
CACCAGTTTTCAGTCCCTTCCCATCCATATACAGGATGGCTACAACCTGTTAACGATGCT
GGTTTCGTGCTTCCAGAAGGAGAACCAATGCCAGATCCTAATATGAACTACTCCAATGCC
TCATCAACTTATCAGCAAACTATGAATGGATTGCCTCCTGGACCTCAGATGTGA