Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029327
CDS Infomation

pacid=37477511 polypeptide=PGSC0003DMP400019958 locus=PGSC0003DMG400011270 ID=PGSC0003DMT400029327.v4.03 annot-version=v4.03
Sequence

ATGCATGCTAGGCATCGGAGTCCGGTAGGTGGGTATAAGTCTAGTTCAATGGGAATGGGT
GGTGTGGCTACTGCCTCGCGGGTTTCACCAGATGGATCAGGGAGAGGTCGTGGATTGCAT
AATTCGGAGTACAGAAACTATAACCGAGGTGGATTTGGGCGGGGACAGTCGAGGCAGTTT
GGATTTCAGCAGCCTTCGCATGGGAACGACATTTTCATGGAAGCTGGACGGTTAGCAGCT
GAGTATCTTGTTTCCAAGGGGTTGCTACCACCGAATGCTCTTTCAGGGAAATTGCCAAAT
GGTAGCTTAAAGAGCCCAGTTGGGAATTTTCAGGGATTTAAGCAACAAGATATTGATGAA
GGTCAGACATCAACTCTTTCACGTATGGAGAGTGATGTTGGTCCTGGTAGGAGAAGGTTT
TCTGATGAATATGAACCAGTGGGTTCAAGAAATTATATGAGAGGAAGGAGAAGAAATGAG
TCCTTTCGAAGTTACAGCTCTGAGTTCAATCGAGAATTGCAAAGGACTGGGTCGTTAGAT
AGAGCCAGGGCCTACCCCGATGTGAATGGTCAAGATGAAGCTTTCCCACGTGATAGAGAT
GAACAGCAAGTGGCTAAAGATAGTAGTGTGATGCTACCTAGTTCCCTTCCTGGTAAACAA
AATCCAGATATAGAGAGTGCGGAGGAGTCGATGTGCTGTGATCCAAAACCTGCCCTGGGA
GATTCAGGTAAAGAGACAGGTCCCATCAACACTGGAAATGATCTCCCATCAGATGGTGAA
CCTGAACCAAAGAAGTCTGCAGACATTGGAATGTTGGAAGAAAAAGCTGATCCTGTTAAT
CTTGCCAACAGTACTGATGGGTTGGAGAAAATAGGTGTTAACGAGGATATAGAAGTCAAG
TTGTTCAGCCAAGAACATAACCAGACCAGCATGACTGATAATGATTTACTTAGCTTATGC
AGGTTTGAGAAGGTTCCGACGAGAACACGTTCTTCATTGGCAAACAGAGGTTTGAAGGTT
TGTCATGATTCTGAAGATGAGGATGCTCATGAGAGTGATATCCCTAAAGAAACTGAAGTC
TATTCCCAAGAAGACATCCCTGTGGATGCTTCCCCTGGTGTCATTTTATCAGATCAAAAC
CGTGATGCGAAAAGCCTTGATTCTGACCAACTGAAACCGCAGTCCACCGAGGAAGAGCCA
TGTCTTACTTATGCCAATAAGCAGTTAAATGAGACAAGCTCTTCATCCTTTCCTGGAAGT
AAGTTAATGAGGGAGGAAGAGAAAATAGAGGGACTAACTGAAATTGAAACTTGCAGTGCT
ATAGACATGGGAAGAGGTCAGAAACGAGAACTGGATGACAATGATGATTGTAAGGGAGGA
GGAACTAAGAGACCTAGAGAATTGGCTTCATTAACAAGTACTTTCTCAGATGTCTTTCTG
TACCATTCTAATTCAATGGAAAAGCAACAGATTTCACAGGAACCTAGGAGATCACATAGC
GAGCCGTTAATATTTCCATCTGAGGAGAAGAGATTGGTAGACATTTCTATGATACCCGAG
GGCGATGCGAGGCTGGGCAGTGACTTCACGGAAAAACAACTTTTGCCCAGTTCCTTTAAG
GCTTTTGATCTCAATCTTATGGAAGCTTCTGATGTGAATGAGAACCATGATGCTGATCCT
GTTCATATCTTCCCGTTGATTACTGAAGGTGTAAAACAAGAAGCACCAGTTGATATTCAT
CTGACCATGAGTAGTAACTCTGATATAACAAGTAACTATGCTAAATCTAGCTTTGATGGG
AGAGATGTTGAAGTGATTGATTTGGAAAATGATTCTGAACAAGAAGAGAAGGCTTTCAAT
AACCCTGAGAGAAAGTCTGAAGTTGTATTCACTGGAACAGATAGCTTTTCTGATAATGCA
CATAGTACCAACAATATACCCCACGCTCAGGATGGTTATGGACTTATGATTTCAGAATTA
CTTGGGAATGATATAGCAAACTGTCCTCCTTTACCAGCAGATATGGATTCTTTGCACAAT
GATATGGGCCTCCATAATGGACTCCATAATGGAGAGGGCATGCTTGGTGACGATGATTCA
ATATATATGTCCTTGGGAGAAATTCCGATAAGTTTTCTGTCACCCTGGGAGCAGCCGGCA
CAAGAATTTGGAAAGCCATTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019958
PEP Infomation

pacid=37477511 transcript=PGSC0003DMT400029327 locus=PGSC0003DMG400011270 ID=PGSC0003DMT400029327.v4.03 annot-version=v4.03
Sequence

MHARHRSPVGGYKSSSMGMGGVATASRVSPDGSGRGRGLHNSEYRNYNRGGFGRGQSRQF
GFQQPSHGNDIFMEAGRLAAEYLVSKGLLPPNALSGKLPNGSLKSPVGNFQGFKQQDIDE
GQTSTLSRMESDVGPGRRRFSDEYEPVGSRNYMRGRRRNESFRSYSSEFNRELQRTGSLD
RARAYPDVNGQDEAFPRDRDEQQVAKDSSVMLPSSLPGKQNPDIESAEESMCCDPKPALG
DSGKETGPINTGNDLPSDGEPEPKKSADIGMLEEKADPVNLANSTDGLEKIGVNEDIEVK
LFSQEHNQTSMTDNDLLSLCRFEKVPTRTRSSLANRGLKVCHDSEDEDAHESDIPKETEV
YSQEDIPVDASPGVILSDQNRDAKSLDSDQLKPQSTEEEPCLTYANKQLNETSSSSFPGS
KLMREEEKIEGLTEIETCSAIDMGRGQKRELDDNDDCKGGGTKRPRELASLTSTFSDVFL
YHSNSMEKQQISQEPRRSHSEPLIFPSEEKRLVDISMIPEGDARLGSDFTEKQLLPSSFK
AFDLNLMEASDVNENHDADPVHIFPLITEGVKQEAPVDIHLTMSSNSDITSNYAKSSFDG
RDVEVIDLENDSEQEEKAFNNPERKSEVVFTGTDSFSDNAHSTNNIPHAQDGYGLMISEL
LGNDIANCPPLPADMDSLHNDMGLHNGLHNGEGMLGDDDSIYMSLGEIPISFLSPWEQPA
QEFGKPF*

Transcript Sequence

Transcript ID

PGSC0003DMT400029327
Transcript Infomation

pacid=37477511 locus=PGSC0003DMG400011270 ID=PGSC0003DMT400029327.v4.03 annot-version=v4.03
Sequence

ATGCATGCTAGGCATCGGAGTCCGGTAGGTGGGTATAAGTCTAGTTCAATGGGAATGGGT
GGTGTGGCTACTGCCTCGCGGGTTTCACCAGATGGATCAGGGAGAGGTCGTGGATTGCAT
AATTCGGAGTACAGAAACTATAACCGAGGTGGATTTGGGCGGGGACAGTCGAGGCAGTTT
GGATTTCAGCAGCCTTCGCATGGGAACGACATTTTCATGGAAGCTGGACGGTTAGCAGCT
GAGTATCTTGTTTCCAAGGGGTTGCTACCACCGAATGCTCTTTCAGGGAAATTGCCAAAT
GGTAGCTTAAAGAGCCCAGTTGGGAATTTTCAGGGATTTAAGCAACAAGATATTGATGAA
GGTCAGACATCAACTCTTTCACGTATGGAGAGTGATGTTGGTCCTGGTAGGAGAAGGTTT
TCTGATGAATATGAACCAGTGGGTTCAAGAAATTATATGAGAGGAAGGAGAAGAAATGAG
TCCTTTCGAAGTTACAGCTCTGAGTTCAATCGAGAATTGCAAAGGACTGGGTCGTTAGAT
AGAGCCAGGGCCTACCCCGATGTGAATGGTCAAGATGAAGCTTTCCCACGTGATAGAGAT
GAACAGCAAGTGGCTAAAGATAGTAGTGTGATGCTACCTAGTTCCCTTCCTGGTAAACAA
AATCCAGATATAGAGAGTGCGGAGGAGTCGATGTGCTGTGATCCAAAACCTGCCCTGGGA
GATTCAGGTAAAGAGACAGGTCCCATCAACACTGGAAATGATCTCCCATCAGATGGTGAA
CCTGAACCAAAGAAGTCTGCAGACATTGGAATGTTGGAAGAAAAAGCTGATCCTGTTAAT
CTTGCCAACAGTACTGATGGGTTGGAGAAAATAGGTGTTAACGAGGATATAGAAGTCAAG
TTGTTCAGCCAAGAACATAACCAGACCAGCATGACTGATAATGATTTACTTAGCTTATGC
AGGTTTGAGAAGGTTCCGACGAGAACACGTTCTTCATTGGCAAACAGAGGTTTGAAGGTT
TGTCATGATTCTGAAGATGAGGATGCTCATGAGAGTGATATCCCTAAAGAAACTGAAGTC
TATTCCCAAGAAGACATCCCTGTGGATGCTTCCCCTGGTGTCATTTTATCAGATCAAAAC
CGTGATGCGAAAAGCCTTGATTCTGACCAACTGAAACCGCAGTCCACCGAGGAAGAGCCA
TGTCTTACTTATGCCAATAAGCAGTTAAATGAGACAAGCTCTTCATCCTTTCCTGGAAGT
AAGTTAATGAGGGAGGAAGAGAAAATAGAGGGACTAACTGAAATTGAAACTTGCAGTGCT
ATAGACATGGGAAGAGGTCAGAAACGAGAACTGGATGACAATGATGATTGTAAGGGAGGA
GGAACTAAGAGACCTAGAGAATTGGCTTCATTAACAAGTACTTTCTCAGATGTCTTTCTG
TACCATTCTAATTCAATGGAAAAGCAACAGATTTCACAGGAACCTAGGAGATCACATAGC
GAGCCGTTAATATTTCCATCTGAGGAGAAGAGATTGGTAGACATTTCTATGATACCCGAG
GGCGATGCGAGGCTGGGCAGTGACTTCACGGAAAAACAACTTTTGCCCAGTTCCTTTAAG
GCTTTTGATCTCAATCTTATGGAAGCTTCTGATGTGAATGAGAACCATGATGCTGATCCT
GTTCATATCTTCCCGTTGATTACTGAAGGTGTAAAACAAGAAGCACCAGTTGATATTCAT
CTGACCATGAGTAGTAACTCTGATATAACAAGTAACTATGCTAAATCTAGCTTTGATGGG
AGAGATGTTGAAGTGATTGATTTGGAAAATGATTCTGAACAAGAAGAGAAGGCTTTCAAT
AACCCTGAGAGAAAGTCTGAAGTTGTATTCACTGGAACAGATAGCTTTTCTGATAATGCA
CATAGTACCAACAATATACCCCACGCTCAGGATGGTTATGGACTTATGATTTCAGAATTA
CTTGGGAATGATATAGCAAACTGTCCTCCTTTACCAGCAGATATGGATTCTTTGCACAAT
GATATGGGCCTCCATAATGGACTCCATAATGGAGAGGGCATGCTTGGTGACGATGATTCA
ATATATATGTCCTTGGGAGAAATTCCGATAAGTTTTCTGTCACCCTGGGAGCAGCCGGCA
CAAGAATTTGGAAAGCCATTTTGA