Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029314
CDS Infomation

pacid=37480315 polypeptide=PGSC0003DMP400019950 locus=PGSC0003DMG400011263 ID=PGSC0003DMT400029314.v4.03 annot-version=v4.03
Sequence

ATGAATGAGCAAGATAATAATAATCCCTCTGCTCCAACAATCCTTCCAGCAAAGCGAAGG
CGTGGACGCCCACGTAAAGATGGAGGTGTTGCTAAGAGAGGGAATTTGCAGTCTCCAGCA
CCCGAAAGCATCAAGAAAGTTCAACAAAATGCTGTTGAAGTGAACCAAAAAGATGGCATG
ATTGGCAGTAACAACGGTGTAGGACAGATGGTTTCTGGTGTCGTTGATGGTCGTTTTGAT
GCAGGGTACTTCATCACCGTGAGGGTTGGTAATAGTAGCACCACGCTCCGTGGATTAGTC
TTCCAGCCAGGGAGATTTGCCCCAATTACACCAGCAAATGATGTTGCCCCATCAGCTACA
ATGTATCACAGGAATCAAGTTGCTAGCCCACTCTTAAACCAGCAGCAGCCAAATGTGGCA
CCAGGACAACAAGTTTTACCTTCTAACCCAATGTCAAGCGCTCCATTTATACCGAATACT
AACCAATTTGCTCCTGTTATGGCACCTAACGAGGGACGATGCAATGTGAGTTCTCCCTCG
GGTGAAAAAATCATGCTGCAGCAGCCAAATCAAGATCAAAGAGTCCAAATCCACCAATCC
CATCTGACCATTCCGGTGGAAAATCTTAGAATGGTTGAAAAGGATGAAGTGATGCAGGTA
TATGAAATCTCGAACCAATCAGAAGGGACTAAAATGGTTGCAGAATCCATGTTGGAACCA
AAAGGTAGTGACGGAACTAGCAATCAGGTACAAAAAGCTCAAAACCAACTCATGGGCTCA
ATGTTTCAGTCTGACATTCTTTTTCATGGTAACCTTAACAGCCCAAGTGGTGAAATTCAT
CATAATCCTGTTGTTTCTAAGTCTCAAGAGGCGTCAGACAACCAACTGATTGAATCTGAA
TCCAACAATGATAAGCAACCGAATCCTGAGCAGTCATATATGCAAACTTTACTCCAGCCT
GGAGAGTTGGTTCACTGTGAAGCGAAGAAACTTGAGATCCATCGATCTCCTCCTGTAAAC
GCTCAAACTCAACTCTACTCCTCCCAGGGGCTTCCTCCAATGAATGAAGAGATTCAGCTG
AAACAATGGACTCATGGTGGACAGGAAAACCCACAGAATCAATTCAATCAAAGTACTCTA
TTTGCTGAACTTAACTCTGTTTCCCCTGCTGCAGAAACTCAAGTTCAGCCAAGCAATGAA
CTAAAAAGCACATTTCTTGAACAGAATTATGTTCAGATGACTCAAGCTCTAGAGGTTGGA
GCTAATGAGAATCCGAATCCCGAGATCAACCCAGTACTGGTTGCTGGTGAAACTCAAGTT
GTGACTACTTCAATGGATTTCATGATGGAAAATCTGAATTATCCAAAGAATGATGAACCA
CAAAGCATTCATATTGGACCTGAAGTTGACTTATCAAGAAATGTTGAAACAGCAAATGCA
ACTAAGGAAGCAAGTGATCCTCCTGGTGACAAACTTGTGCTAGGTTCTCAATTATCACCA
CAGCAACAAGAGGTGGAAATCGATAATTCTGATCATTCAGCAAAACTTGAAACTCAGAAC
AAAAGTTGTGATGGTGGCAACATCAACCTGGAGATGTTTCACCAAGTCCAACCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019950
PEP Infomation

pacid=37480315 transcript=PGSC0003DMT400029314 locus=PGSC0003DMG400011263 ID=PGSC0003DMT400029314.v4.03 annot-version=v4.03
Sequence

MNEQDNNNPSAPTILPAKRRRGRPRKDGGVAKRGNLQSPAPESIKKVQQNAVEVNQKDGM
IGSNNGVGQMVSGVVDGRFDAGYFITVRVGNSSTTLRGLVFQPGRFAPITPANDVAPSAT
MYHRNQVASPLLNQQQPNVAPGQQVLPSNPMSSAPFIPNTNQFAPVMAPNEGRCNVSSPS
GEKIMLQQPNQDQRVQIHQSHLTIPVENLRMVEKDEVMQVYEISNQSEGTKMVAESMLEP
KGSDGTSNQVQKAQNQLMGSMFQSDILFHGNLNSPSGEIHHNPVVSKSQEASDNQLIESE
SNNDKQPNPEQSYMQTLLQPGELVHCEAKKLEIHRSPPVNAQTQLYSSQGLPPMNEEIQL
KQWTHGGQENPQNQFNQSTLFAELNSVSPAAETQVQPSNELKSTFLEQNYVQMTQALEVG
ANENPNPEINPVLVAGETQVVTTSMDFMMENLNYPKNDEPQSIHIGPEVDLSRNVETANA
TKEASDPPGDKLVLGSQLSPQQQEVEIDNSDHSAKLETQNKSCDGGNINLEMFHQVQP*

Transcript Sequence

Transcript ID

PGSC0003DMT400029314
Transcript Infomation

pacid=37480315 locus=PGSC0003DMG400011263 ID=PGSC0003DMT400029314.v4.03 annot-version=v4.03
Sequence

ATGAATGAGCAAGATAATAATAATCCCTCTGCTCCAACAATCCTTCCAGCAAAGCGAAGG
CGTGGACGCCCACGTAAAGATGGAGGTGTTGCTAAGAGAGGGAATTTGCAGTCTCCAGCA
CCCGAAAGCATCAAGAAAGTTCAACAAAATGCTGTTGAAGTGAACCAAAAAGATGGCATG
ATTGGCAGTAACAACGGTGTAGGACAGATGGTTTCTGGTGTCGTTGATGGTCGTTTTGAT
GCAGGGTACTTCATCACCGTGAGGGTTGGTAATAGTAGCACCACGCTCCGTGGATTAGTC
TTCCAGCCAGGGAGATTTGCCCCAATTACACCAGCAAATGATGTTGCCCCATCAGCTACA
ATGTATCACAGGAATCAAGTTGCTAGCCCACTCTTAAACCAGCAGCAGCCAAATGTGGCA
CCAGGACAACAAGTTTTACCTTCTAACCCAATGTCAAGCGCTCCATTTATACCGAATACT
AACCAATTTGCTCCTGTTATGGCACCTAACGAGGGACGATGCAATGTGAGTTCTCCCTCG
GGTGAAAAAATCATGCTGCAGCAGCCAAATCAAGATCAAAGAGTCCAAATCCACCAATCC
CATCTGACCATTCCGGTGGAAAATCTTAGAATGGTTGAAAAGGATGAAGTGATGCAGGTA
TATGAAATCTCGAACCAATCAGAAGGGACTAAAATGGTTGCAGAATCCATGTTGGAACCA
AAAGGTAGTGACGGAACTAGCAATCAGGTACAAAAAGCTCAAAACCAACTCATGGGCTCA
ATGTTTCAGTCTGACATTCTTTTTCATGGTAACCTTAACAGCCCAAGTGGTGAAATTCAT
CATAATCCTGTTGTTTCTAAGTCTCAAGAGGCGTCAGACAACCAACTGATTGAATCTGAA
TCCAACAATGATAAGCAACCGAATCCTGAGCAGTCATATATGCAAACTTTACTCCAGCCT
GGAGAGTTGGTTCACTGTGAAGCGAAGAAACTTGAGATCCATCGATCTCCTCCTGTAAAC
GCTCAAACTCAACTCTACTCCTCCCAGGGGCTTCCTCCAATGAATGAAGAGATTCAGCTG
AAACAATGGACTCATGGTGGACAGGAAAACCCACAGAATCAATTCAATCAAAGTACTCTA
TTTGCTGAACTTAACTCTGTTTCCCCTGCTGCAGAAACTCAAGTTCAGCCAAGCAATGAA
CTAAAAAGCACATTTCTTGAACAGAATTATGTTCAGATGACTCAAGCTCTAGAGGTTGGA
GCTAATGAGAATCCGAATCCCGAGATCAACCCAGTACTGGTTGCTGGTGAAACTCAAGTT
GTGACTACTTCAATGGATTTCATGATGGAAAATCTGAATTATCCAAAGAATGATGAACCA
CAAAGCATTCATATTGGACCTGAAGTTGACTTATCAAGAAATGTTGAAACAGCAAATGCA
ACTAAGGAAGCAAGTGATCCTCCTGGTGACAAACTTGTGCTAGGTTCTCAATTATCACCA
CAGCAACAAGAGGTGGAAATCGATAATTCTGATCATTCAGCAAAACTTGAAACTCAGAAC
AAAAGTTGTGATGGTGGCAACATCAACCTGGAGATGTTTCACCAAGTCCAACCTTGA