Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029225
CDS Infomation

pacid=37478720 polypeptide=PGSC0003DMP400019889 locus=PGSC0003DMG402011239 ID=PGSC0003DMT400029225.v4.03 annot-version=v4.03
Sequence

ATGGCCTTCGTGGACTCTATCCTCACCTCTCGCCAAATTTCTCAAGGGAATGCTTGTCAT
TCATCAGAGAGTGAACCAGCATCTAGAGCAGTCCTTATGATGATTTATTCTCCCAGCAAG
TACATTTCTTCCAAAGCAAGATTCATCCTATCTGAAGTTCTGGCACTGAAGGGAAAGGAC
TATGTGGGATATTTACTGGATAGTTTGAAAGCCGCATCTTCTGGAAACAAGTTTGGAATA
CCGAGTAATTTTAGACTTGTCATAAGCTTGACAAGTCTGGCATGTTATTCAGCTCTGCCA
AAATATCAGAAGCATGTAATTCAGCATGGAGGAATAAACATTCTGTCGAGCTTCATTAGT
TGGTGGTTTGACAATCCTGTCCACCTAAATAGATCTAGTGTGGCTCCTCATGTGCAAAGC
CATTTCAGTGGAAGGACTTGTTGCTGGCCTTCTTCAGAAGATTGGGAAGGTGAAGATATG
CTTTTACTTTTTGGACTTGTGGCTCTTGCTGAATTGATAAATGCGGAAGATCGCTGTGGC
ATCTTTCAGAATCAGATGGAATTGCGAGCTGCTTTTATAAGAGATCTCCAGGAGATCTGC
ATAAACAATTCTTACTCCGGACCACGATGGTACGCTGCTTATATTCTTCGCCATCTTGGA
TTATATGGGTTTCCAAGTAAGTTTGGGAGAGAATTTCGGGAACTCCTTACTGACAATGAG
CATTCTGATGTGGAACTTATAATTAAAAATCAGGAACCTGTGCGTGTCCATGGTGTTATT
CTTCTGGTTAGATGCCCATCACTGTTACCTCCTGAAGAATTGCTTAAGGAGAAAACATTT
GATTCTTCTTATAAGCAGGATTCAGATTCATGCAATAGGTTAATCACCAAAGTTCGCCTC
TCTGCTCATGTTGATTGCCAGTCACTGACAAAGTTATTAGAGTATATTTATTCAGGATCC
TTTGAAGCAGGAGAAGACCTTGTGAAGAAGTTGAAAATTTTAGCCAAACATTGCAATTTG
CAATCTCTAGTACAATTGCTTTGTGGAAGCAATCTGAAATGGGGAACTCCATTCCCAAGC
TTTGATTTTACCTCTGCTCTTGAGCCAGCTGGACGTAATTTTTCGGACATTATTTTGGAG
GCTGAAACTTCGGGACCAAGTAATCAGGACTGCAGTTCGTGCTCCATATCTGTTTTACAC
CTGCATGTTCACAAAGTTATACTGTGGCCAAGTTGTGAATACTTACGGGCTCTATTCCAG
TCAGGAATGCAAGAAAGCCATTCACTGACCATCAAGGTGCCAGTTTGTTGGGATTCCTTG
GTTAAGTTAGTCAGCTGGTTCTATTCTGGTGAGTTGCCTAGACCAATATCTGGCTGTCTA
TGGGATAATCTGAGTAAGGAGGAAAAGCTACGCGAACTTGAGCCCTATGTAGAACTATGT
TCGCTTGCTCAATTTTGGCTCTTAGAAGACTTGCATGAAAAATGTTTTAGACTGATTGTA
TCCATTTTGGATTCCTGTCAGTACTTGTCAATAAAAATTATCCAGATGGCTGCTAACCTC
AATCAATGGAAGCTAGTTGAAGTTGCAGCTGAGTATCTATCCCCTATGTATCATCATCTA
CGTAACTCAAGCGAGTTTGATGCATTGGATGAGCATCTCATTGAAATTATCCGTGCTGCC
TCTGTTCAGTTTTCTCAAAGAAATGGACACTTGGTCACATTGACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400019889
PEP Infomation

pacid=37478720 transcript=PGSC0003DMT400029225 locus=PGSC0003DMG402011239 ID=PGSC0003DMT400029225.v4.03 annot-version=v4.03
Sequence

MAFVDSILTSRQISQGNACHSSESEPASRAVLMMIYSPSKYISSKARFILSEVLALKGKD
YVGYLLDSLKAASSGNKFGIPSNFRLVISLTSLACYSALPKYQKHVIQHGGINILSSFIS
WWFDNPVHLNRSSVAPHVQSHFSGRTCCWPSSEDWEGEDMLLLFGLVALAELINAEDRCG
IFQNQMELRAAFIRDLQEICINNSYSGPRWYAAYILRHLGLYGFPSKFGREFRELLTDNE
HSDVELIIKNQEPVRVHGVILLVRCPSLLPPEELLKEKTFDSSYKQDSDSCNRLITKVRL
SAHVDCQSLTKLLEYIYSGSFEAGEDLVKKLKILAKHCNLQSLVQLLCGSNLKWGTPFPS
FDFTSALEPAGRNFSDIILEAETSGPSNQDCSSCSISVLHLHVHKVILWPSCEYLRALFQ
SGMQESHSLTIKVPVCWDSLVKLVSWFYSGELPRPISGCLWDNLSKEEKLRELEPYVELC
SLAQFWLLEDLHEKCFRLIVSILDSCQYLSIKIIQMAANLNQWKLVEVAAEYLSPMYHHL
RNSSEFDALDEHLIEIIRAASVQFSQRNGHLVTLT*

Transcript Sequence

Transcript ID

PGSC0003DMT400029225
Transcript Infomation

pacid=37478720 locus=PGSC0003DMG402011239 ID=PGSC0003DMT400029225.v4.03 annot-version=v4.03
Sequence

ATGGCCTTCGTGGACTCTATCCTCACCTCTCGCCAAATTTCTCAAGGGAATGCTTGTCAT
TCATCAGAGAGTGAACCAGCATCTAGAGCAGTCCTTATGATGATTTATTCTCCCAGCAAG
TACATTTCTTCCAAAGCAAGATTCATCCTATCTGAAGTTCTGGCACTGAAGGGAAAGGAC
TATGTGGGATATTTACTGGATAGTTTGAAAGCCGCATCTTCTGGAAACAAGTTTGGAATA
CCGAGTAATTTTAGACTTGTCATAAGCTTGACAAGTCTGGCATGTTATTCAGCTCTGCCA
AAATATCAGAAGCATGTAATTCAGCATGGAGGAATAAACATTCTGTCGAGCTTCATTAGT
TGGTGGTTTGACAATCCTGTCCACCTAAATAGATCTAGTGTGGCTCCTCATGTGCAAAGC
CATTTCAGTGGAAGGACTTGTTGCTGGCCTTCTTCAGAAGATTGGGAAGGTGAAGATATG
CTTTTACTTTTTGGACTTGTGGCTCTTGCTGAATTGATAAATGCGGAAGATCGCTGTGGC
ATCTTTCAGAATCAGATGGAATTGCGAGCTGCTTTTATAAGAGATCTCCAGGAGATCTGC
ATAAACAATTCTTACTCCGGACCACGATGGTACGCTGCTTATATTCTTCGCCATCTTGGA
TTATATGGGTTTCCAAGTAAGTTTGGGAGAGAATTTCGGGAACTCCTTACTGACAATGAG
CATTCTGATGTGGAACTTATAATTAAAAATCAGGAACCTGTGCGTGTCCATGGTGTTATT
CTTCTGGTTAGATGCCCATCACTGTTACCTCCTGAAGAATTGCTTAAGGAGAAAACATTT
GATTCTTCTTATAAGCAGGATTCAGATTCATGCAATAGGTTAATCACCAAAGTTCGCCTC
TCTGCTCATGTTGATTGCCAGTCACTGACAAAGTTATTAGAGTATATTTATTCAGGATCC
TTTGAAGCAGGAGAAGACCTTGTGAAGAAGTTGAAAATTTTAGCCAAACATTGCAATTTG
CAATCTCTAGTACAATTGCTTTGTGGAAGCAATCTGAAATGGGGAACTCCATTCCCAAGC
TTTGATTTTACCTCTGCTCTTGAGCCAGCTGGACGTAATTTTTCGGACATTATTTTGGAG
GCTGAAACTTCGGGACCAAGTAATCAGGACTGCAGTTCGTGCTCCATATCTGTTTTACAC
CTGCATGTTCACAAAGTTATACTGTGGCCAAGTTGTGAATACTTACGGGCTCTATTCCAG
TCAGGAATGCAAGAAAGCCATTCACTGACCATCAAGGTGCCAGTTTGTTGGGATTCCTTG
GTTAAGTTAGTCAGCTGGTTCTATTCTGGTGAGTTGCCTAGACCAATATCTGGCTGTCTA
TGGGATAATCTGAGTAAGGAGGAAAAGCTACGCGAACTTGAGCCCTATGTAGAACTATGT
TCGCTTGCTCAATTTTGGCTCTTAGAAGACTTGCATGAAAAATGTTTTAGACTGATTGTA
TCCATTTTGGATTCCTGTCAGTACTTGTCAATAAAAATTATCCAGATGGCTGCTAACCTC
AATCAATGGAAGCTAGTTGAAGTTGCAGCTGAGTATCTATCCCCTATGTATCATCATCTA
CGTAACTCAAGCGAGTTTGATGCATTGGATGAGCATCTCATTGAAATTATCCGTGCTGCC
TCTGTTCAGTTTTCTCAAAGAAATGGACACTTGGTCACATTGACATGA