Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029209
CDS Infomation

pacid=37477375 polypeptide=PGSC0003DMP400019880 locus=PGSC0003DMG400011237 ID=PGSC0003DMT400029209.v4.03 annot-version=v4.03
Sequence

ATGGCGATGAGAGACTTGGTCACCGGTGCTCCTAGTTGTGGCGAACCTTCTTCTTCTTCT
AATCCACTTGGTGCTCTCGCTAACGCACTCATCGGTTCATCATCTAAGACTCAGGAGAGG
CTAAAAGAGATCCCTACATCAGTAACTACATCGTCCAATGGCAACTTCCTTGCGGGTGTT
GAAGAGCCATTTGTCTCACTTCCAGGATCAGAGTTTGAACATCCACTTCAGCCTAATATT
CAGGGTTCCCAATTCCTTCAAGGGTTTCGTTCTGCTGATCAAAATAGGCTCGCTGATGCT
TGGGATGAGATACAAAGGCCTCAACTTCCTTTTGCTCATGGAAGTCAGAACATGACAAAC
ATCCCTTTGGAGCATGCTCGGCTTCAACCAGATTTGAATGGGCCTCCACAACAAGTATTG
TCAAGCTTTCTGCACTCGTTTGTCAACAGCGGTCATGGTGGCGTTCCGTTTCGTCCTGCT
TCGCTGCCATTATTAGGTTTATCAGAAGGTGACAAGCAATGCATACGGGACCGTAGCACG
ATCATGGCCCGACATTTTTTTGCCGATAAAACTGAAGACTTCATAAATAGACAGGTTAAT
GCTCTATTGTCTTCATTAGAAATTGATAATCATGTTAGGGCAAGGGGCCCTGTGCCTGGA
AGATATCCCGAGCTTGAGGAGTATTGGAATGAGTCATTAGCTATGAAACCTGTGCCTCAT
GTTGCAGATGGATGGATTAGTGAGTTTGCACAGAACCGAGTAGGACATGCTGACCCCAAT
GCTTGGGCCCAATCATTTGAACAACAACATGGTGCTAATGGCTGGGCATCTGAATTTGAG
CATGAGCAATCCCAACTTGGAATGATTGGTCAAATGAGAGGTGCAAATATTCCTAATCTA
GCAGCAATGGAACAAACACGTATGTTGGCCCATACATTAGCTCAAAACAGTGACCCAAAA
TTTCAGAATTCCAAATTTCTCCAATTTGTATCCAAGATGAGTCGTGGTGAAATTTCTATT
GAAGAAAATCAATTCAAGCCTGCTACAATTTCTTCTGGGGATTGGGCAGCAGAATATGAA
CAGCAGCATAATGGAGGTCAATCATGGGCTGACCAGTTTGCACATGAGGAGCTTTCTCGT
GGACCACAAGGGTGGGTGAATGAGTTTTCTGCTGAACGTGCGCAGCATGGATCTGTAAAT
GATGAGTGGGTAAGTGAATTTTCAAAGTTGAATGTGAATGATGATTGGGCAGATGAATTT
GGGCGTCAAGTTGCTGAGGGAGCATTTGGTGAAACCTCTGCTGATGGTTGGGCAGAGGCT
TATGATGAGTATATGAATGAGCAAGCTGCTCTCAAGCAGCAATCAGACGCATCAAGGGGA
GTTTATGTGTTCTCTGATCTGAACCCTTATGTTGGTCATCCTAATCCTTTAAAAGAAGGG
CAAGAATTGTTTCGTAAGGGTCTCTTAAGTGAAGCAGTTCTTGCTTTGGAGGCTGAAGTT
TTGAAGAACCCTGAAAATGCTGAGGGTTGGAGGTTACTTGGCATAGCACATGCTGAAAAC
GATGATGATCAACAGGCTATAGCTGCTATGATGCGGGCACAGGAGGCTGATCCCGCAAAT
CTGGAAGTTCTTCTTTCCCTTGGAGTAAGTCATACAAATGAACTGGAGCAACAAGCTGCA
TTGAAGTATTTGTATAGTTGGTTACGCCACCACCCGAAGTATGGGAGTATTGCGCCTCAG
GAGCAGCCCATTTCTTTCTATCATGCTGATGTAGCTAGATTGTTTACAGATGCAGCTAAA
ATGGCACCTGAGGATGCTGACGTACACATTGTACTTGGGGTGTTATACAATCTATCAAGA
GAATATGACAAAGCTATAGAGTCTTTTAAGACAGCACTAGAGCTCAAACCTAGGGACTAC
TCACTCTGGAATAAGCTTGGTGCAACACAAGCTAACAGTGTGCAGAGTTCTGATGCAATA
TTGGCTTATCAGCAGGCGCTAGATATAAAGCCTAACTATGTACGTGCATGGGCAAACATG
GGCATCAGTTATGCCAACCAGGGTATGTATGAGGATTCCATCCGTTATTATGTCCGGGCA
CTAGCAATGAATCCGAAAGCAGATAATGCCTGGCAATATTTGAGAATATCTCTGAGCTGT
GCATCTCGAAATGATATGTTGGAAGCTTGTGACTCGCGGAATATTGATGTTCTCCAGAAG
GAATTCCCTCTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019880
PEP Infomation

pacid=37477375 transcript=PGSC0003DMT400029209 locus=PGSC0003DMG400011237 ID=PGSC0003DMT400029209.v4.03 annot-version=v4.03
Sequence

MAMRDLVTGAPSCGEPSSSSNPLGALANALIGSSSKTQERLKEIPTSVTTSSNGNFLAGV
EEPFVSLPGSEFEHPLQPNIQGSQFLQGFRSADQNRLADAWDEIQRPQLPFAHGSQNMTN
IPLEHARLQPDLNGPPQQVLSSFLHSFVNSGHGGVPFRPASLPLLGLSEGDKQCIRDRST
IMARHFFADKTEDFINRQVNALLSSLEIDNHVRARGPVPGRYPELEEYWNESLAMKPVPH
VADGWISEFAQNRVGHADPNAWAQSFEQQHGANGWASEFEHEQSQLGMIGQMRGANIPNL
AAMEQTRMLAHTLAQNSDPKFQNSKFLQFVSKMSRGEISIEENQFKPATISSGDWAAEYE
QQHNGGQSWADQFAHEELSRGPQGWVNEFSAERAQHGSVNDEWVSEFSKLNVNDDWADEF
GRQVAEGAFGETSADGWAEAYDEYMNEQAALKQQSDASRGVYVFSDLNPYVGHPNPLKEG
QELFRKGLLSEAVLALEAEVLKNPENAEGWRLLGIAHAENDDDQQAIAAMMRAQEADPAN
LEVLLSLGVSHTNELEQQAALKYLYSWLRHHPKYGSIAPQEQPISFYHADVARLFTDAAK
MAPEDADVHIVLGVLYNLSREYDKAIESFKTALELKPRDYSLWNKLGATQANSVQSSDAI
LAYQQALDIKPNYVRAWANMGISYANQGMYEDSIRYYVRALAMNPKADNAWQYLRISLSC
ASRNDMLEACDSRNIDVLQKEFPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400029209
Transcript Infomation

pacid=37477375 locus=PGSC0003DMG400011237 ID=PGSC0003DMT400029209.v4.03 annot-version=v4.03
Sequence

ATGGCGATGAGAGACTTGGTCACCGGTGCTCCTAGTTGTGGCGAACCTTCTTCTTCTTCT
AATCCACTTGGTGCTCTCGCTAACGCACTCATCGGTTCATCATCTAAGACTCAGGAGAGG
CTAAAAGAGATCCCTACATCAGTAACTACATCGTCCAATGGCAACTTCCTTGCGGGTGTT
GAAGAGCCATTTGTCTCACTTCCAGGATCAGAGTTTGAACATCCACTTCAGCCTAATATT
CAGGGTTCCCAATTCCTTCAAGGGTTTCGTTCTGCTGATCAAAATAGGCTCGCTGATGCT
TGGGATGAGATACAAAGGCCTCAACTTCCTTTTGCTCATGGAAGTCAGAACATGACAAAC
ATCCCTTTGGAGCATGCTCGGCTTCAACCAGATTTGAATGGGCCTCCACAACAAGTATTG
TCAAGCTTTCTGCACTCGTTTGTCAACAGCGGTCATGGTGGCGTTCCGTTTCGTCCTGCT
TCGCTGCCATTATTAGGTTTATCAGAAGGTGACAAGCAATGCATACGGGACCGTAGCACG
ATCATGGCCCGACATTTTTTTGCCGATAAAACTGAAGACTTCATAAATAGACAGGTTAAT
GCTCTATTGTCTTCATTAGAAATTGATAATCATGTTAGGGCAAGGGGCCCTGTGCCTGGA
AGATATCCCGAGCTTGAGGAGTATTGGAATGAGTCATTAGCTATGAAACCTGTGCCTCAT
GTTGCAGATGGATGGATTAGTGAGTTTGCACAGAACCGAGTAGGACATGCTGACCCCAAT
GCTTGGGCCCAATCATTTGAACAACAACATGGTGCTAATGGCTGGGCATCTGAATTTGAG
CATGAGCAATCCCAACTTGGAATGATTGGTCAAATGAGAGGTGCAAATATTCCTAATCTA
GCAGCAATGGAACAAACACGTATGTTGGCCCATACATTAGCTCAAAACAGTGACCCAAAA
TTTCAGAATTCCAAATTTCTCCAATTTGTATCCAAGATGAGTCGTGGTGAAATTTCTATT
GAAGAAAATCAATTCAAGCCTGCTACAATTTCTTCTGGGGATTGGGCAGCAGAATATGAA
CAGCAGCATAATGGAGGTCAATCATGGGCTGACCAGTTTGCACATGAGGAGCTTTCTCGT
GGACCACAAGGGTGGGTGAATGAGTTTTCTGCTGAACGTGCGCAGCATGGATCTGTAAAT
GATGAGTGGGTAAGTGAATTTTCAAAGTTGAATGTGAATGATGATTGGGCAGATGAATTT
GGGCGTCAAGTTGCTGAGGGAGCATTTGGTGAAACCTCTGCTGATGGTTGGGCAGAGGCT
TATGATGAGTATATGAATGAGCAAGCTGCTCTCAAGCAGCAATCAGACGCATCAAGGGGA
GTTTATGTGTTCTCTGATCTGAACCCTTATGTTGGTCATCCTAATCCTTTAAAAGAAGGG
CAAGAATTGTTTCGTAAGGGTCTCTTAAGTGAAGCAGTTCTTGCTTTGGAGGCTGAAGTT
TTGAAGAACCCTGAAAATGCTGAGGGTTGGAGGTTACTTGGCATAGCACATGCTGAAAAC
GATGATGATCAACAGGCTATAGCTGCTATGATGCGGGCACAGGAGGCTGATCCCGCAAAT
CTGGAAGTTCTTCTTTCCCTTGGAGTAAGTCATACAAATGAACTGGAGCAACAAGCTGCA
TTGAAGTATTTGTATAGTTGGTTACGCCACCACCCGAAGTATGGGAGTATTGCGCCTCAG
GAGCAGCCCATTTCTTTCTATCATGCTGATGTAGCTAGATTGTTTACAGATGCAGCTAAA
ATGGCACCTGAGGATGCTGACGTACACATTGTACTTGGGGTGTTATACAATCTATCAAGA
GAATATGACAAAGCTATAGAGTCTTTTAAGACAGCACTAGAGCTCAAACCTAGGGACTAC
TCACTCTGGAATAAGCTTGGTGCAACACAAGCTAACAGTGTGCAGAGTTCTGATGCAATA
TTGGCTTATCAGCAGGCGCTAGATATAAAGCCTAACTATGTACGTGCATGGGCAAACATG
GGCATCAGTTATGCCAACCAGGGTATGTATGAGGATTCCATCCGTTATTATGTCCGGGCA
CTAGCAATGAATCCGAAAGCAGATAATGCCTGGCAATATTTGAGAATATCTCTGAGCTGT
GCATCTCGAAATGATATGTTGGAAGCTTGTGACTCGCGGAATATTGATGTTCTCCAGAAG
GAATTCCCTCTGTGA