Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029186
CDS Infomation

pacid=37432496 polypeptide=PGSC0003DMP400019860 locus=PGSC0003DMG401011224 ID=PGSC0003DMT400029186.v4.03 annot-version=v4.03
Sequence

ATGAGACAAAGGAAGAATGTTGATGTTTCATCTACTGATAGCAAAACCAACATACCCAAA
TCTTCCAAAAACAATAAATTCACACACCCTTTATTGAAAAAAGTTTTTTTCTTGTGTTTG
TTCGTCAGATTTGTTAATGCTTTTTTGGTCCAAACATATTTCAATCCAGATGAACACTGG
CAAGCCCTTGAAGTTGCTCATCGAATCTCATTTGGATATGGACATTTGACGTGGGAATGG
GAAAAGGGTATAAGGAGTTATCTTCATCCAGTGATATTTGCTGGATTGTATAAAGTTCTT
GCTTTTTTTCATCTTGACAAACCTTGGTTTATGATAAGGACTCCACGACTGCTGCAGTCA
ATATTTTCAGCTTTTGGGGACTTCTATTTGTTTAAGCTCTCTCAAGAGATATTTGGTGAC
CGTGTTGCGAAATTCGCGCTTTTTGCCCAGTTGACAAACTGGTTCATGTTTTTCTGTATC
ACACGTACTTTATCCAATAGTCTGGAGACTGTTCTTACTGTTGTGAGCCTGTACTACTGG
CCTTGCATTAGACCAACTGCTAGTAAAATTTCACGGGGTTCTAGAAAATGGGGTTTAGCT
ACAGCTGCATTAGCATGTGCAATCCGACCTACAAGTGCCATTACATGGATCTATATTGGC
CTCCTAGAGCTGTACCTGACACGTGATAAGCTGAAATTTGTTCTTCTTGAGGTGATTCCT
ATTGGGACATTAATTATGGGACTTACATTTCTGGTGGATCGCTGGATGTATGGCACTTGG
GTCCTCGTGCCTTTGAACTTTCTGAAGTTCAATTTTCTCTCTGCTGGTGGAGACTATTAT
GGAACTCATGCGTGGCATTGGTACTTCACTCAGGGTTTTACAGTTATGGTCTTCACATTC
TTGCCGTTTTCGCTTGCTGGCATTTTCAAATCTAAGCAGTGGAAACTATCTGGTCTAATT
GCTTGGTGTTTGGCAATTTATAGCTTGTTGGGTCACAAAGAGTTCAGGTTTGTCCTCCCT
GTGCTTCCAATAGCTTTAATGTTCTCTGGGTACTGGTTGGCAACAATTGGAGGGCCTGAT
AAGTCTAACGGCCGAGGTAAAAGATCTCCAAGCAGTCATGATAGGTGCTCAGGAAAATTG
CAACTGGCCGTTCTGTTCCTAGCAGTTAGTAATATTCCGATGGCATTTTACATGAGTATG
GTTCATCAGAGAGGGACAGAGGATGTAATGAACTACCTCTCCGTAGAGGCGGACAGTGGG
AAAGTGAAAAGTGTCCTTTTCTTTACACCGTGCCATGCCACACCTTACTACTCAACTCTT
CACCGTAACCTTCCTATGCGTTTCTTAGATTGCACACCAAGTGACGAGAAAGGAGCTCTA
GACGAGTCTGATCAGTTTCTGGTGGATCCAGCTGGTTTTGCAACAGAATTTGCTAAGAAT
TGGTCTATACCTAGTCACATTGTGCTCTTTGACTTTCAGGAAAAACTACTGAAGGACTTT
CTAGCTTTGCATAATTTCGAAGAGATAAAACGGTTCTTCCATGCTCACTTCAAGGTGGAT
CGAGAACTTCAGGCATCTGTTGCTGTGTATACACTGAAAGGCCAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019860
PEP Infomation

pacid=37432496 transcript=PGSC0003DMT400029186 locus=PGSC0003DMG401011224 ID=PGSC0003DMT400029186.v4.03 annot-version=v4.03
Sequence

MRQRKNVDVSSTDSKTNIPKSSKNNKFTHPLLKKVFFLCLFVRFVNAFLVQTYFNPDEHW
QALEVAHRISFGYGHLTWEWEKGIRSYLHPVIFAGLYKVLAFFHLDKPWFMIRTPRLLQS
IFSAFGDFYLFKLSQEIFGDRVAKFALFAQLTNWFMFFCITRTLSNSLETVLTVVSLYYW
PCIRPTASKISRGSRKWGLATAALACAIRPTSAITWIYIGLLELYLTRDKLKFVLLEVIP
IGTLIMGLTFLVDRWMYGTWVLVPLNFLKFNFLSAGGDYYGTHAWHWYFTQGFTVMVFTF
LPFSLAGIFKSKQWKLSGLIAWCLAIYSLLGHKEFRFVLPVLPIALMFSGYWLATIGGPD
KSNGRGKRSPSSHDRCSGKLQLAVLFLAVSNIPMAFYMSMVHQRGTEDVMNYLSVEADSG
KVKSVLFFTPCHATPYYSTLHRNLPMRFLDCTPSDEKGALDESDQFLVDPAGFATEFAKN
WSIPSHIVLFDFQEKLLKDFLALHNFEEIKRFFHAHFKVDRELQASVAVYTLKGQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400029186
Transcript Infomation

pacid=37432496 locus=PGSC0003DMG401011224 ID=PGSC0003DMT400029186.v4.03 annot-version=v4.03
Sequence

ATGAGACAAAGGAAGAATGTTGATGTTTCATCTACTGATAGCAAAACCAACATACCCAAA
TCTTCCAAAAACAATAAATTCACACACCCTTTATTGAAAAAAGTTTTTTTCTTGTGTTTG
TTCGTCAGATTTGTTAATGCTTTTTTGGTCCAAACATATTTCAATCCAGATGAACACTGG
CAAGCCCTTGAAGTTGCTCATCGAATCTCATTTGGATATGGACATTTGACGTGGGAATGG
GAAAAGGGTATAAGGAGTTATCTTCATCCAGTGATATTTGCTGGATTGTATAAAGTTCTT
GCTTTTTTTCATCTTGACAAACCTTGGTTTATGATAAGGACTCCACGACTGCTGCAGTCA
ATATTTTCAGCTTTTGGGGACTTCTATTTGTTTAAGCTCTCTCAAGAGATATTTGGTGAC
CGTGTTGCGAAATTCGCGCTTTTTGCCCAGTTGACAAACTGGTTCATGTTTTTCTGTATC
ACACGTACTTTATCCAATAGTCTGGAGACTGTTCTTACTGTTGTGAGCCTGTACTACTGG
CCTTGCATTAGACCAACTGCTAGTAAAATTTCACGGGGTTCTAGAAAATGGGGTTTAGCT
ACAGCTGCATTAGCATGTGCAATCCGACCTACAAGTGCCATTACATGGATCTATATTGGC
CTCCTAGAGCTGTACCTGACACGTGATAAGCTGAAATTTGTTCTTCTTGAGGTGATTCCT
ATTGGGACATTAATTATGGGACTTACATTTCTGGTGGATCGCTGGATGTATGGCACTTGG
GTCCTCGTGCCTTTGAACTTTCTGAAGTTCAATTTTCTCTCTGCTGGTGGAGACTATTAT
GGAACTCATGCGTGGCATTGGTACTTCACTCAGGGTTTTACAGTTATGGTCTTCACATTC
TTGCCGTTTTCGCTTGCTGGCATTTTCAAATCTAAGCAGTGGAAACTATCTGGTCTAATT
GCTTGGTGTTTGGCAATTTATAGCTTGTTGGGTCACAAAGAGTTCAGGTTTGTCCTCCCT
GTGCTTCCAATAGCTTTAATGTTCTCTGGGTACTGGTTGGCAACAATTGGAGGGCCTGAT
AAGTCTAACGGCCGAGGTAAAAGATCTCCAAGCAGTCATGATAGGTGCTCAGGAAAATTG
CAACTGGCCGTTCTGTTCCTAGCAGTTAGTAATATTCCGATGGCATTTTACATGAGTATG
GTTCATCAGAGAGGGACAGAGGATGTAATGAACTACCTCTCCGTAGAGGCGGACAGTGGG
AAAGTGAAAAGTGTCCTTTTCTTTACACCGTGCCATGCCACACCTTACTACTCAACTCTT
CACCGTAACCTTCCTATGCGTTTCTTAGATTGCACACCAAGTGACGAGAAAGGAGCTCTA
GACGAGTCTGATCAGTTTCTGGTGGATCCAGCTGGTTTTGCAACAGAATTTGCTAAGAAT
TGGTCTATACCTAGTCACATTGTGCTCTTTGACTTTCAGGAAAAACTACTGAAGGACTTT
CTAGCTTTGCATAATTTCGAAGAGATAAAACGGTTCTTCCATGCTCACTTCAAGGTGGAT
CGAGAACTTCAGGCATCTGTTGCTGTGTATACACTGAAAGGCCAGTGA