Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029115
CDS Infomation

pacid=37433153 polypeptide=PGSC0003DMP400019805 locus=PGSC0003DMG400011200 ID=PGSC0003DMT400029115.v4.03 annot-version=v4.03
Sequence

ATGGATGTGTATGAATCAGAGATAGCATTAAAGAAGATTTCAACAGTGGAGGCAAAAAGA
GCTCCATTGATTCAGGCTGAGAAGAACCATGGAAATACTCGCAGGCCAAGAACAAGAGAA
GTTAGTTCTAGGTACAGGTCACCTACTCCATCAGCTTCCTCTGGCCCTAGACGTTGTTCT
TCTCCAAATGTCACAAGAATTGGAACTACTGCATCAACACTTTCGTTACCTAAGAGAGCT
ATATCGGCTGAAAGGAAACGGCCAACGACTCCTTCATCACCTACCAGTCCATCACCATCG
ACACCTGTACATGATACATCTGCAGAAGAATTGTTGTCCAGAAAGATGGCAGGCAATAGG
TTGCCAGAATCTTTATGGCCCTCAACAATGAGGAGTCTGAGTGTTTCTTTTCAGTCTGAT
TCGTTTTCTTTACCTGTTAGTAAGAGAGAAAAACCTGCTCCTCATGCTCTATGTGATCGT
ACTTTGAGACCATCATCAAATGTAGTGCAGAGACAGGAAACACCTCCAGGTTCTCGAAAG
GCCACACCTGAGAGAAGGAGGAGTCCATTGAAGGGAAAGAATTCTTCTGATCAAGCAGAG
AATTCTAGACCAGTTGATAGTTTAAATGCTCGATTAGTCGATCAGCATCGATGGCCAAGT
AGAACGAATAAGAAGGTACCTTCTGGTATTATGAACAGAAGTATTGATCTGAGTGATAAG
AATAGCAAAATTGCGCCAAATACTCATCCAGTCACACCTACGTTGAGGAGATTATCATTG
GATGGTTACAGCAGACCATTGCAAAAATCTGCCAGTGAATTGCTGTCATTAATATCAGTA
GATGATAATTCACTTTCAATGCAGAAGTCCAGACCTTCGACTTCATTGGATAGAACAGTA
TCGACGAATCCAGTAGCTAGATCTCTGACTGTATCAGCTCCTGGATCACGTCTTCCTTCA
CCAAATAAAGCATCTGTTCTATCATCCTCTGCATCTAGAGGAGTCGGTCCATCTCGAACA
AAATCAGTCCCAAGTACGACATCTAGAGGGCCAAGTCCATCTCGGATAAGGCCATCTAGT
CCATCTAGGCAACAACCCAAAACTGCTACTTCTGTCCTCAGCTTTATTGCAGATATCAAA
AAGGGGAAGAAGGCAGCTAACCACATAGAAGATGTTCATCAGCTGAGGCTATTGTATAAT
AGACATCTCCAATGGCGGTATGCTAATGCCAGGTCAAATGCAGCATTGCACACGCAGAAA
GTTAAAACTGAGAAAACATTGTACAATGTCTGGAGAAATACCTCAGACCTATGGACTTCT
GTTATTAAAAAGAGAATTGCGCTACAACAGGTTAAGCTGAGGCTGAAGCTTTTTGCAGTT
CTAAATGAACAGCTTACCTACCTTGATGAGTGGGCATCAATTGAAGGGGATCATACCAGT
TCATTATCCCATGCTATACAAGACCTACAAGCATGCACTCTCCGTCTTCCAATAACTGGA
CGAGCTAAGGGTGACATTGAAAGTGTTAAGGAAGCTGTTTGCTCAGCTGTTGATGTAATG
CAGGCAATGGGATCTTCCATGCGTTTTATATTATCTAGGGTGGAAGGGATGAACTGCCTG
GTTTCTGAACTTGCTGATGTGGCAGCTCAAGAGCGAGCCATGCTGGATGAATGTGAAGCC
TTGTTGGCTTCAACAGCAGCTATGCAGGTGAGACAAAATGCTGGGGCCCTAAAGTTATTG
CCTTCGTTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400019805
PEP Infomation

pacid=37433153 transcript=PGSC0003DMT400029115 locus=PGSC0003DMG400011200 ID=PGSC0003DMT400029115.v4.03 annot-version=v4.03
Sequence

MDVYESEIALKKISTVEAKRAPLIQAEKNHGNTRRPRTREVSSRYRSPTPSASSGPRRCS
SPNVTRIGTTASTLSLPKRAISAERKRPTTPSSPTSPSPSTPVHDTSAEELLSRKMAGNR
LPESLWPSTMRSLSVSFQSDSFSLPVSKREKPAPHALCDRTLRPSSNVVQRQETPPGSRK
ATPERRRSPLKGKNSSDQAENSRPVDSLNARLVDQHRWPSRTNKKVPSGIMNRSIDLSDK
NSKIAPNTHPVTPTLRRLSLDGYSRPLQKSASELLSLISVDDNSLSMQKSRPSTSLDRTV
STNPVARSLTVSAPGSRLPSPNKASVLSSSASRGVGPSRTKSVPSTTSRGPSPSRIRPSS
PSRQQPKTATSVLSFIADIKKGKKAANHIEDVHQLRLLYNRHLQWRYANARSNAALHTQK
VKTEKTLYNVWRNTSDLWTSVIKKRIALQQVKLRLKLFAVLNEQLTYLDEWASIEGDHTS
SLSHAIQDLQACTLRLPITGRAKGDIESVKEAVCSAVDVMQAMGSSMRFILSRVEGMNCL
VSELADVAAQERAMLDECEALLASTAAMQVRQNAGALKLLPSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400029115
Transcript Infomation

pacid=37433153 locus=PGSC0003DMG400011200 ID=PGSC0003DMT400029115.v4.03 annot-version=v4.03
Sequence

ATGGATGTGTATGAATCAGAGATAGCATTAAAGAAGATTTCAACAGTGGAGGCAAAAAGA
GCTCCATTGATTCAGGCTGAGAAGAACCATGGAAATACTCGCAGGCCAAGAACAAGAGAA
GTTAGTTCTAGGTACAGGTCACCTACTCCATCAGCTTCCTCTGGCCCTAGACGTTGTTCT
TCTCCAAATGTCACAAGAATTGGAACTACTGCATCAACACTTTCGTTACCTAAGAGAGCT
ATATCGGCTGAAAGGAAACGGCCAACGACTCCTTCATCACCTACCAGTCCATCACCATCG
ACACCTGTACATGATACATCTGCAGAAGAATTGTTGTCCAGAAAGATGGCAGGCAATAGG
TTGCCAGAATCTTTATGGCCCTCAACAATGAGGAGTCTGAGTGTTTCTTTTCAGTCTGAT
TCGTTTTCTTTACCTGTTAGTAAGAGAGAAAAACCTGCTCCTCATGCTCTATGTGATCGT
ACTTTGAGACCATCATCAAATGTAGTGCAGAGACAGGAAACACCTCCAGGTTCTCGAAAG
GCCACACCTGAGAGAAGGAGGAGTCCATTGAAGGGAAAGAATTCTTCTGATCAAGCAGAG
AATTCTAGACCAGTTGATAGTTTAAATGCTCGATTAGTCGATCAGCATCGATGGCCAAGT
AGAACGAATAAGAAGGTACCTTCTGGTATTATGAACAGAAGTATTGATCTGAGTGATAAG
AATAGCAAAATTGCGCCAAATACTCATCCAGTCACACCTACGTTGAGGAGATTATCATTG
GATGGTTACAGCAGACCATTGCAAAAATCTGCCAGTGAATTGCTGTCATTAATATCAGTA
GATGATAATTCACTTTCAATGCAGAAGTCCAGACCTTCGACTTCATTGGATAGAACAGTA
TCGACGAATCCAGTAGCTAGATCTCTGACTGTATCAGCTCCTGGATCACGTCTTCCTTCA
CCAAATAAAGCATCTGTTCTATCATCCTCTGCATCTAGAGGAGTCGGTCCATCTCGAACA
AAATCAGTCCCAAGTACGACATCTAGAGGGCCAAGTCCATCTCGGATAAGGCCATCTAGT
CCATCTAGGCAACAACCCAAAACTGCTACTTCTGTCCTCAGCTTTATTGCAGATATCAAA
AAGGGGAAGAAGGCAGCTAACCACATAGAAGATGTTCATCAGCTGAGGCTATTGTATAAT
AGACATCTCCAATGGCGGTATGCTAATGCCAGGTCAAATGCAGCATTGCACACGCAGAAA
GTTAAAACTGAGAAAACATTGTACAATGTCTGGAGAAATACCTCAGACCTATGGACTTCT
GTTATTAAAAAGAGAATTGCGCTACAACAGGTTAAGCTGAGGCTGAAGCTTTTTGCAGTT
CTAAATGAACAGCTTACCTACCTTGATGAGTGGGCATCAATTGAAGGGGATCATACCAGT
TCATTATCCCATGCTATACAAGACCTACAAGCATGCACTCTCCGTCTTCCAATAACTGGA
CGAGCTAAGGGTGACATTGAAAGTGTTAAGGAAGCTGTTTGCTCAGCTGTTGATGTAATG
CAGGCAATGGGATCTTCCATGCGTTTTATATTATCTAGGGTGGAAGGGATGAACTGCCTG
GTTTCTGAACTTGCTGATGTGGCAGCTCAAGAGCGAGCCATGCTGGATGAATGTGAAGCC
TTGTTGGCTTCAACAGCAGCTATGCAGGTGAGACAAAATGCTGGGGCCCTAAAGTTATTG
CCTTCGTTATAG