Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029103
CDS Infomation

pacid=37433172 polypeptide=PGSC0003DMP400019801 locus=PGSC0003DMG400011196 ID=PGSC0003DMT400029103.v4.03 annot-version=v4.03
Sequence

ATGCAGGCTGATCAGACGGTGTTAAGTTTGAGACCAGGTGGTGGTAACAGAGGTGGTGGA
AGCAGAGTGCTTGGCCCTCGCTTTGAACCTTCCTCGACTAATTCAGATCTCCCTTTGCTT
CGTCCACATGGCGGTTCTTCATCTATTTCATCTTTCAAGACTGGAGACTCACGTTTTGAG
GGCCGTGAGTGTGTTAGGTATACTCGAGATCAGCTGCTGCAACTGAGGGAGGTGGTTGCC
ATTTCTGATGATATCCTTCGAATCAAACAAGAAGTTGAATCTGAATTGTTTGGTGAAGAT
GGCAGTCGAAGTCGTGCAGACACCAATGTCCAATCTCAGACTCGTTATTCTGAGCCAGAT
AGCCGTGACTGGCGTAGCAAGTCATCACAATTTTCTGCCCCCGCAGAGGACAGATCATGG
GACACTCTACGAGAAAACAGAGAATTTGGTGGCCGGCAAGAACAGCTTAACTCACAGTTT
GCAAGAACTCAAATATCTCCCAACCGAGGGGGAGGACCTGCTCCTACACTTGTCAAAGCT
GAGCTGCCATGGTCAGTTCGAAGAGGCAATCTTTCTGATGAAGCTCGTGTCTTGAAGACT
GTGAAGGGTATCCTCAACAAGCTGACTCCAGAGAAGTTTGATCTCCTCAAAGGTCAACTG
ATAGATTCAGGGATAACAAGTGCAGACATCCTAAAGGGTGTTATTTCCTTGATATTTGAC
AAGGCTGTGTTGGAACCAACATTTTGCCCGATGTATGCCCAACTGTGTTCTGATCTTAAT
GAAAAGCTGCCTCCATTTCCCTCTGATGAACCTGGTGGCAAAGAGATTACGTTCAAGCGC
ATTCTGTTGAATAACTGTCAGGAGGCATTTGAAGGTGCTCACAAGCTGCGAGAAGAGGCG
AGGCAAATGACAGCCCCTGATCAGGAGTCAGAACGCAAGGACAAAGAAAGGTTGATCAAA
TTGCGGACTCTTGGCAATATTAAGCTTATTGGCGAGCTTTTGAAGCAAAAGATGGTCCCT
GAAAAGATTGTTCACCACATTGTTCAGGAACTATTAGGACAAGATCCCACAAGCTGTCCG
GAAGAAGAGAACGTTGAAGCCATCTGTCAGTTCTTCAACACCATTGGCAAGCAGCTTGAT
GAGAACCAAAAATCAAGGCGCATCAACGATGTGTACTTTAATCGGTTGAAGGAACTATCA
ACGAACCCCCAGTTGGCTCCCCGACTGCGGTTCATGGTTCGTAATGTGCTGGACTTACGT
TCCAATAGCTGGGTCCCTAGGCGGGAAGAGGTGAAAGCAAAAACCATCACGGAGATTCAC
TCTGAAGCAGAAAAGACCTTGGGCTTGCGTCCTGGTGCCACTGCAAGCATGAGAAATTCC
CGTGGTCCTCCGGCTCAAGGGAGTTTGAGCCCTGGTGGCTTCCCTATCAATCGGCCAGGC
ACTGGTGGTATGATGCCTGGAATGCCCGGAAATAGGAAGATGCCTGGTACACCTGGGATG
GATAATGACAACTGGGAAGTTCCTAGATCCCGCTCTATGCCAAGAGGTAATGGACCACTG
GTTCAGGCTGGTGGACGAAGTCAGCCACCATTGGTTGGCAAGTCGCCCGCATTGAACCCA
AAACTTCTGCCTCAGGGTAGTGGTGGTTACGTGAGTGGCAGGCCTAGTGCCCTCTTGCAA
GGTAGTGGTGCTCCTCCTGCTCACCCTACGGGCTATGGTATTGGCATGAACCCTGCATCA
CAGGTTCCCGGACCGGTTAGACCACCTTCAACAATTGTTGTTTCTCCAGTTGTTGCAAAA
CCCCAGGCTCCTGCTGCAAGTTCGACACCTGATGTACTAAAGAGAAAAACTGCATCTCTT
CTTGAGGAATATTTCAGTGTTAGGCTTCTGGAAGAAGCTTTGCAGTGTGTTGAGGAGCTC
AAATCCCCAGCCTACCATTCTGAGGTTGTCAAAGAAGCAATATCAATTGGTCTAGACAAA
AGCCCACCATGTGTTGAACCAGTTGCACAGCTTCTCGAACACTTGTTTGCGAAGAAGGTT
TTTACTGCTGGGGACTTGGTCACTGGATTCTTGAATTTTTCCTCTCTGCTGGATGACCTT
GCCATGGATCTTCCAAAAGCACCGGTAAATTTTGGTGACATAATATCAAGACTAGTTTTG
GCTGGAGCTTTCGACTTCAAGGTGGTCAATGAGATCTTGAAGAAGGTAACCGATGATCTA
TACCAGAAAGACGTATTCACAGCTACAATGGGATCTATTAGCTCTAGTCCTACAGGCCAA
GCAGTATTGGATTCACAAGCATCCGATGTTGAGGCATGCAAAGCTCTCTTTCAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400019801
PEP Infomation

pacid=37433172 transcript=PGSC0003DMT400029103 locus=PGSC0003DMG400011196 ID=PGSC0003DMT400029103.v4.03 annot-version=v4.03
Sequence

MQADQTVLSLRPGGGNRGGGSRVLGPRFEPSSTNSDLPLLRPHGGSSSISSFKTGDSRFE
GRECVRYTRDQLLQLREVVAISDDILRIKQEVESELFGEDGSRSRADTNVQSQTRYSEPD
SRDWRSKSSQFSAPAEDRSWDTLRENREFGGRQEQLNSQFARTQISPNRGGGPAPTLVKA
ELPWSVRRGNLSDEARVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFD
KAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRILLNNCQEAFEGAHKLREEA
RQMTAPDQESERKDKERLIKLRTLGNIKLIGELLKQKMVPEKIVHHIVQELLGQDPTSCP
EEENVEAICQFFNTIGKQLDENQKSRRINDVYFNRLKELSTNPQLAPRLRFMVRNVLDLR
SNSWVPRREEVKAKTITEIHSEAEKTLGLRPGATASMRNSRGPPAQGSLSPGGFPINRPG
TGGMMPGMPGNRKMPGTPGMDNDNWEVPRSRSMPRGNGPLVQAGGRSQPPLVGKSPALNP
KLLPQGSGGYVSGRPSALLQGSGAPPAHPTGYGIGMNPASQVPGPVRPPSTIVVSPVVAK
PQAPAASSTPDVLKRKTASLLEEYFSVRLLEEALQCVEELKSPAYHSEVVKEAISIGLDK
SPPCVEPVAQLLEHLFAKKVFTAGDLVTGFLNFSSLLDDLAMDLPKAPVNFGDIISRLVL
AGAFDFKVVNEILKKVTDDLYQKDVFTATMGSISSSPTGQAVLDSQASDVEACKALFQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400029103
Transcript Infomation

pacid=37433172 locus=PGSC0003DMG400011196 ID=PGSC0003DMT400029103.v4.03 annot-version=v4.03
Sequence

ATGCAGGCTGATCAGACGGTGTTAAGTTTGAGACCAGGTGGTGGTAACAGAGGTGGTGGA
AGCAGAGTGCTTGGCCCTCGCTTTGAACCTTCCTCGACTAATTCAGATCTCCCTTTGCTT
CGTCCACATGGCGGTTCTTCATCTATTTCATCTTTCAAGACTGGAGACTCACGTTTTGAG
GGCCGTGAGTGTGTTAGGTATACTCGAGATCAGCTGCTGCAACTGAGGGAGGTGGTTGCC
ATTTCTGATGATATCCTTCGAATCAAACAAGAAGTTGAATCTGAATTGTTTGGTGAAGAT
GGCAGTCGAAGTCGTGCAGACACCAATGTCCAATCTCAGACTCGTTATTCTGAGCCAGAT
AGCCGTGACTGGCGTAGCAAGTCATCACAATTTTCTGCCCCCGCAGAGGACAGATCATGG
GACACTCTACGAGAAAACAGAGAATTTGGTGGCCGGCAAGAACAGCTTAACTCACAGTTT
GCAAGAACTCAAATATCTCCCAACCGAGGGGGAGGACCTGCTCCTACACTTGTCAAAGCT
GAGCTGCCATGGTCAGTTCGAAGAGGCAATCTTTCTGATGAAGCTCGTGTCTTGAAGACT
GTGAAGGGTATCCTCAACAAGCTGACTCCAGAGAAGTTTGATCTCCTCAAAGGTCAACTG
ATAGATTCAGGGATAACAAGTGCAGACATCCTAAAGGGTGTTATTTCCTTGATATTTGAC
AAGGCTGTGTTGGAACCAACATTTTGCCCGATGTATGCCCAACTGTGTTCTGATCTTAAT
GAAAAGCTGCCTCCATTTCCCTCTGATGAACCTGGTGGCAAAGAGATTACGTTCAAGCGC
ATTCTGTTGAATAACTGTCAGGAGGCATTTGAAGGTGCTCACAAGCTGCGAGAAGAGGCG
AGGCAAATGACAGCCCCTGATCAGGAGTCAGAACGCAAGGACAAAGAAAGGTTGATCAAA
TTGCGGACTCTTGGCAATATTAAGCTTATTGGCGAGCTTTTGAAGCAAAAGATGGTCCCT
GAAAAGATTGTTCACCACATTGTTCAGGAACTATTAGGACAAGATCCCACAAGCTGTCCG
GAAGAAGAGAACGTTGAAGCCATCTGTCAGTTCTTCAACACCATTGGCAAGCAGCTTGAT
GAGAACCAAAAATCAAGGCGCATCAACGATGTGTACTTTAATCGGTTGAAGGAACTATCA
ACGAACCCCCAGTTGGCTCCCCGACTGCGGTTCATGGTTCGTAATGTGCTGGACTTACGT
TCCAATAGCTGGGTCCCTAGGCGGGAAGAGGTGAAAGCAAAAACCATCACGGAGATTCAC
TCTGAAGCAGAAAAGACCTTGGGCTTGCGTCCTGGTGCCACTGCAAGCATGAGAAATTCC
CGTGGTCCTCCGGCTCAAGGGAGTTTGAGCCCTGGTGGCTTCCCTATCAATCGGCCAGGC
ACTGGTGGTATGATGCCTGGAATGCCCGGAAATAGGAAGATGCCTGGTACACCTGGGATG
GATAATGACAACTGGGAAGTTCCTAGATCCCGCTCTATGCCAAGAGGTAATGGACCACTG
GTTCAGGCTGGTGGACGAAGTCAGCCACCATTGGTTGGCAAGTCGCCCGCATTGAACCCA
AAACTTCTGCCTCAGGGTAGTGGTGGTTACGTGAGTGGCAGGCCTAGTGCCCTCTTGCAA
GGTAGTGGTGCTCCTCCTGCTCACCCTACGGGCTATGGTATTGGCATGAACCCTGCATCA
CAGGTTCCCGGACCGGTTAGACCACCTTCAACAATTGTTGTTTCTCCAGTTGTTGCAAAA
CCCCAGGCTCCTGCTGCAAGTTCGACACCTGATGTACTAAAGAGAAAAACTGCATCTCTT
CTTGAGGAATATTTCAGTGTTAGGCTTCTGGAAGAAGCTTTGCAGTGTGTTGAGGAGCTC
AAATCCCCAGCCTACCATTCTGAGGTTGTCAAAGAAGCAATATCAATTGGTCTAGACAAA
AGCCCACCATGTGTTGAACCAGTTGCACAGCTTCTCGAACACTTGTTTGCGAAGAAGGTT
TTTACTGCTGGGGACTTGGTCACTGGATTCTTGAATTTTTCCTCTCTGCTGGATGACCTT
GCCATGGATCTTCCAAAAGCACCGGTAAATTTTGGTGACATAATATCAAGACTAGTTTTG
GCTGGAGCTTTCGACTTCAAGGTGGTCAATGAGATCTTGAAGAAGGTAACCGATGATCTA
TACCAGAAAGACGTATTCACAGCTACAATGGGATCTATTAGCTCTAGTCCTACAGGCCAA
GCAGTATTGGATTCACAAGCATCCGATGTTGAGGCATGCAAAGCTCTCTTTCAATAA