Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029079
CDS Infomation

pacid=37432851 polypeptide=PGSC0003DMP400019784 locus=PGSC0003DMG400011189 ID=PGSC0003DMT400029079.v4.03 annot-version=v4.03
Sequence

ATGGCTGGAAGATTAGCTAGGGATGAACAAGGTAGAATTGAAGTTAATTGTAATGGTGAA
GGTGTTTTATTTGTTGAGGCTGAAAGTGATTCATGTATTGATGATTTTGGTGATTTTACA
CCATGTTTGGAACTTAAGAAACTCATTCCTAGTGTTGAAACTTCTGGAGATATCTCAACC
TTTCCACTCGCTATATTTCAGGTTACTCGTTTCAAGTGTGGTGGAATCGCTCTTGGTGGT
GGAGTATTCCACACGTTATCCGATGGTCTCTCATCCCTCCACTTCATCAACACGTGGTCG
GACATCGCCCGTGGCCTCTCCGTCGCAGTCCCCCCATTCATCGACCGGACGCTCCTCCAT
GCACGGGACCCACCAACATCTTCTTTCGAGCATGTTGAGTATCATCCCCCACCTACCCTC
ATCTCATCAAAAAAAGGTGAGTCCACAGGCCCAAAGTCTAGTACCACGGCCATGTTGAAA
TTCTCAAGTGAACAAGTCGGACTTCTTAAGTCTAAGTCCGAAAACGAGGGCAGCACTTAT
GAAATCCTCGCGGCCCATATTTGGCGATGCACGAGCAAGGCACGTGGATTGGCAGATGAT
CAATTGACCAAATTACATGTGGCCACTGACGGTAGGTCAAGGCTTTGCCCTCCCTTGCCA
CCGGGTTACCTAGGAAATGTGGTGTTCACGGCCACACCAATAGCTAAATCATGTGAACTT
CAATCAGAGCCGTTGAGGAATTCCGTTAAGAGAATTCACAATGAGTTGATCAAAATGGAC
GATAATTACCTAAGATCAGCGTTGGATTACCTCGAATTACAACCTGATTTATCGACCCTA
ATCCGGGGCCCGACTTACTTTACTAGCCCTAACCTCAATATTAATAGTTGGACTAGGTTG
CCTGTCCATGAGTGTGATTTTGGATGGGGTAGGCCAATTCATATGGGACCAGCTTGCATT
TTATATGAAGGGACAATATATATTATACCAAGTCCAAATACAAAAGATAGGAACTTGCGT
TTGGCTGTTTGTCTAGATCCTGATCACATGCCACTATTTGAAAAGTATTTGTATGAATTT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400019784
PEP Infomation

pacid=37432851 transcript=PGSC0003DMT400029079 locus=PGSC0003DMG400011189 ID=PGSC0003DMT400029079.v4.03 annot-version=v4.03
Sequence

MAGRLARDEQGRIEVNCNGEGVLFVEAESDSCIDDFGDFTPCLELKKLIPSVETSGDIST
FPLAIFQVTRFKCGGIALGGGVFHTLSDGLSSLHFINTWSDIARGLSVAVPPFIDRTLLH
ARDPPTSSFEHVEYHPPPTLISSKKGESTGPKSSTTAMLKFSSEQVGLLKSKSENEGSTY
EILAAHIWRCTSKARGLADDQLTKLHVATDGRSRLCPPLPPGYLGNVVFTATPIAKSCEL
QSEPLRNSVKRIHNELIKMDDNYLRSALDYLELQPDLSTLIRGPTYFTSPNLNINSWTRL
PVHECDFGWGRPIHMGPACILYEGTIYIIPSPNTKDRNLRLAVCLDPDHMPLFEKYLYEF
*

Transcript Sequence

Transcript ID

PGSC0003DMT400029079
Transcript Infomation

pacid=37432851 locus=PGSC0003DMG400011189 ID=PGSC0003DMT400029079.v4.03 annot-version=v4.03
Sequence

ATGGCTGGAAGATTAGCTAGGGATGAACAAGGTAGAATTGAAGTTAATTGTAATGGTGAA
GGTGTTTTATTTGTTGAGGCTGAAAGTGATTCATGTATTGATGATTTTGGTGATTTTACA
CCATGTTTGGAACTTAAGAAACTCATTCCTAGTGTTGAAACTTCTGGAGATATCTCAACC
TTTCCACTCGCTATATTTCAGGTTACTCGTTTCAAGTGTGGTGGAATCGCTCTTGGTGGT
GGAGTATTCCACACGTTATCCGATGGTCTCTCATCCCTCCACTTCATCAACACGTGGTCG
GACATCGCCCGTGGCCTCTCCGTCGCAGTCCCCCCATTCATCGACCGGACGCTCCTCCAT
GCACGGGACCCACCAACATCTTCTTTCGAGCATGTTGAGTATCATCCCCCACCTACCCTC
ATCTCATCAAAAAAAGGTGAGTCCACAGGCCCAAAGTCTAGTACCACGGCCATGTTGAAA
TTCTCAAGTGAACAAGTCGGACTTCTTAAGTCTAAGTCCGAAAACGAGGGCAGCACTTAT
GAAATCCTCGCGGCCCATATTTGGCGATGCACGAGCAAGGCACGTGGATTGGCAGATGAT
CAATTGACCAAATTACATGTGGCCACTGACGGTAGGTCAAGGCTTTGCCCTCCCTTGCCA
CCGGGTTACCTAGGAAATGTGGTGTTCACGGCCACACCAATAGCTAAATCATGTGAACTT
CAATCAGAGCCGTTGAGGAATTCCGTTAAGAGAATTCACAATGAGTTGATCAAAATGGAC
GATAATTACCTAAGATCAGCGTTGGATTACCTCGAATTACAACCTGATTTATCGACCCTA
ATCCGGGGCCCGACTTACTTTACTAGCCCTAACCTCAATATTAATAGTTGGACTAGGTTG
CCTGTCCATGAGTGTGATTTTGGATGGGGTAGGCCAATTCATATGGGACCAGCTTGCATT
TTATATGAAGGGACAATATATATTATACCAAGTCCAAATACAAAAGATAGGAACTTGCGT
TTGGCTGTTTGTCTAGATCCTGATCACATGCCACTATTTGAAAAGTATTTGTATGAATTT
TGA