Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029075
CDS Infomation

pacid=37432180 polypeptide=PGSC0003DMP400019780 locus=PGSC0003DMG400011187 ID=PGSC0003DMT400029075.v4.03 annot-version=v4.03
Sequence

ATGGCGCCTCAATTTGAAAATAAACTTGATCATATCCAAAACCAACCTGCCAATATGCGT
GAGGCAATTTGGAGAGAGATTGAGAAGGAGAAAATTAAAGAGGAGATTATAGCTGAAGAG
ATAGCTCGAAGACGCATGTTGGAGTTGGAAGTTAGACGAGAGCTCATGATGGAAAGACAA
CTAGCACAGCAGAGTGGAGAGGGATTGTCTCCTTTTTCTTCACCTGCAATGAGTTTCTCT
CCCACGCTTCCATTCTCGAAGCAACAGACTGTTGTAAGGTCTGTAGAGGAAAGAATTGCA
AGGTCACTTGAGGACAGGATGGGAAGGGGGATATCAGTCTCTAGATTGGGTGCAAGAAAT
GAGATTGGGAGACTTGAAATAGTACCATTTGAGGAGCGGATTCCAGAGATTCCTTTTCAG
CAGCGGAGTGTGGAACCAAAAAATTCTGCTTTGAAGCCTGTATCCCATAGTTCAGTGCCA
ATGATTTCTGAATTGCAGTCCCCTTTGGAGCCTAGAAAAGAAAAAGACAAGATCATCTTG
CTGGCTAAGCCTATTACAAGTGTCTCTGGAGCAAAACGAAAAGCTGTAACACCACCAGTG
GAGGTTGCCAGCCAGCCTCCGTCATCCAGTGTTCCCAAGAAAAATGGGAAAGAGGACTGG
AGTTGTGCACTTTGCCAGGTAAGTGCGACATGTGAGCGTGGTCTGAATGATCACCTCCAA
GGAAAGAAACACAAGTCCAAGGAAGCTGCTTTGCGAGAACAGAGGAACGGGAAGAACTAC
AGTATCGGTCTTTTCCCAAAGAAACCTAAGATTAACAACTTTTCAGAAGCCGATGGCAAT
GTTAACATGGAGCAAATGGTAAAACCAAAAGTTGAATTGTTGCTTCATAACAAATCAGGG
GAAAGATCATCTTTGGTAATTTTGGAGAAAGAAGGTGCAGAGGACACCATCACCCCAACT
CTGCATCACAATGCTGATGACTTGAAGAAAAGTGCAAATGCAACTCCAAAAAAGCAGAAG
ACTAGTAAGAAGAAGAAGTACAAATTTTGGTGCGCAACGTGCAAAGTAGGGGCTTTGTCA
GAGGTGTCATTGGAGGCACACAGGGTAGGGAAGAAGCATAAGGCTCGTCTCCTGGTGCTC
AGCAGCGTTGCTGCTTCAGCTTCTAAGGTTGAGAGCACTCAAACTGTTAATGAAGCATTA
GAAGAGGTCGAAGAAACTGAAGCTGTTAAGGTTGAGAGCACTCAGACTGTTCATGAAGCA
TTAGAAGAGGTCGAAGAAACTGAAGCTGCTAAAATTGAGAGCACTCCAACTGTTATTGAA
GCATTAAAAGAGGTTGAAGAAACTGAAACTGCTAAGGTTGAGAGCACTCCAACTGTTAAT
GAAGCATTAGAAGTTGTCAAAGAAACTGAAGTGATCGATGATGTGGGTGCAGGTGTTGAT
AGCATTAACCCCGACGAGCAGGAAGAAGTGTTCACCACTGGCGATAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019780
PEP Infomation

pacid=37432180 transcript=PGSC0003DMT400029075 locus=PGSC0003DMG400011187 ID=PGSC0003DMT400029075.v4.03 annot-version=v4.03
Sequence

MAPQFENKLDHIQNQPANMREAIWREIEKEKIKEEIIAEEIARRRMLELEVRRELMMERQ
LAQQSGEGLSPFSSPAMSFSPTLPFSKQQTVVRSVEERIARSLEDRMGRGISVSRLGARN
EIGRLEIVPFEERIPEIPFQQRSVEPKNSALKPVSHSSVPMISELQSPLEPRKEKDKIIL
LAKPITSVSGAKRKAVTPPVEVASQPPSSSVPKKNGKEDWSCALCQVSATCERGLNDHLQ
GKKHKSKEAALREQRNGKNYSIGLFPKKPKINNFSEADGNVNMEQMVKPKVELLLHNKSG
ERSSLVILEKEGAEDTITPTLHHNADDLKKSANATPKKQKTSKKKKYKFWCATCKVGALS
EVSLEAHRVGKKHKARLLVLSSVAASASKVESTQTVNEALEEVEETEAVKVESTQTVHEA
LEEVEETEAAKIESTPTVIEALKEVEETETAKVESTPTVNEALEVVKETEVIDDVGAGVD
SINPDEQEEVFTTGDN*

Transcript Sequence

Transcript ID

PGSC0003DMT400029075
Transcript Infomation

pacid=37432180 locus=PGSC0003DMG400011187 ID=PGSC0003DMT400029075.v4.03 annot-version=v4.03
Sequence

ATGGCGCCTCAATTTGAAAATAAACTTGATCATATCCAAAACCAACCTGCCAATATGCGT
GAGGCAATTTGGAGAGAGATTGAGAAGGAGAAAATTAAAGAGGAGATTATAGCTGAAGAG
ATAGCTCGAAGACGCATGTTGGAGTTGGAAGTTAGACGAGAGCTCATGATGGAAAGACAA
CTAGCACAGCAGAGTGGAGAGGGATTGTCTCCTTTTTCTTCACCTGCAATGAGTTTCTCT
CCCACGCTTCCATTCTCGAAGCAACAGACTGTTGTAAGGTCTGTAGAGGAAAGAATTGCA
AGGTCACTTGAGGACAGGATGGGAAGGGGGATATCAGTCTCTAGATTGGGTGCAAGAAAT
GAGATTGGGAGACTTGAAATAGTACCATTTGAGGAGCGGATTCCAGAGATTCCTTTTCAG
CAGCGGAGTGTGGAACCAAAAAATTCTGCTTTGAAGCCTGTATCCCATAGTTCAGTGCCA
ATGATTTCTGAATTGCAGTCCCCTTTGGAGCCTAGAAAAGAAAAAGACAAGATCATCTTG
CTGGCTAAGCCTATTACAAGTGTCTCTGGAGCAAAACGAAAAGCTGTAACACCACCAGTG
GAGGTTGCCAGCCAGCCTCCGTCATCCAGTGTTCCCAAGAAAAATGGGAAAGAGGACTGG
AGTTGTGCACTTTGCCAGGTAAGTGCGACATGTGAGCGTGGTCTGAATGATCACCTCCAA
GGAAAGAAACACAAGTCCAAGGAAGCTGCTTTGCGAGAACAGAGGAACGGGAAGAACTAC
AGTATCGGTCTTTTCCCAAAGAAACCTAAGATTAACAACTTTTCAGAAGCCGATGGCAAT
GTTAACATGGAGCAAATGGTAAAACCAAAAGTTGAATTGTTGCTTCATAACAAATCAGGG
GAAAGATCATCTTTGGTAATTTTGGAGAAAGAAGGTGCAGAGGACACCATCACCCCAACT
CTGCATCACAATGCTGATGACTTGAAGAAAAGTGCAAATGCAACTCCAAAAAAGCAGAAG
ACTAGTAAGAAGAAGAAGTACAAATTTTGGTGCGCAACGTGCAAAGTAGGGGCTTTGTCA
GAGGTGTCATTGGAGGCACACAGGGTAGGGAAGAAGCATAAGGCTCGTCTCCTGGTGCTC
AGCAGCGTTGCTGCTTCAGCTTCTAAGGTTGAGAGCACTCAAACTGTTAATGAAGCATTA
GAAGAGGTCGAAGAAACTGAAGCTGTTAAGGTTGAGAGCACTCAGACTGTTCATGAAGCA
TTAGAAGAGGTCGAAGAAACTGAAGCTGCTAAAATTGAGAGCACTCCAACTGTTATTGAA
GCATTAAAAGAGGTTGAAGAAACTGAAACTGCTAAGGTTGAGAGCACTCCAACTGTTAAT
GAAGCATTAGAAGTTGTCAAAGAAACTGAAGTGATCGATGATGTGGGTGCAGGTGTTGAT
AGCATTAACCCCGACGAGCAGGAAGAAGTGTTCACCACTGGCGATAACTGA