Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400029064
CDS Infomation

pacid=37434820 polypeptide=PGSC0003DMP400019773 locus=PGSC0003DMG400011184 ID=PGSC0003DMT400029064.v4.03 annot-version=v4.03
Sequence

ATGAGTGTTTCTTTGAGTGTAATGACTTTTAATCTTCTTGAAGATCAGTTAGAGGACAGT
CCAAACTCATGGGAGAAGAGGAAAGATTTGTGTATAAGTGTTATTACAAGTTATTCTCCT
ATGATTCTCTGTACCCAACAAGGTGTGAAGTCACAGTTGGACTATATTCAGCAGTGCTTG
CAAGGTTATGAACAGTTTGGAATATCAAGGAAAGGAGCTGAAGACACTTCTGATCAGCAC
TGTACCATATTTTACGACAAGGAAAAGGTTGAGCTTTTAGAAGGGGGAACATTTTGGTTG
TCTGAATCACCTTCGGTGCCTGGAAGTATGTCTTGGGGTTCTACAGTACCATGCACCGCA
ACATGGGCAACATTCCAGCTGAAAGGCGCTGAGCCGCCAGGTTTTTCATTTCAGATTGTT
AATACAACCATGGATGAGTTCAGTCCCCGTGCTCGCAGGCGAGGTGCTTTGCTCACTTGG
CAGCATATTGCATCCTTGCCCCCTAGCTTATCCGTCGTGTACTGTGGAGGATTTAATACC
CAAAAGGAATCCACTACAGGTCGTTTTCTTCTTGGGAGATCTAGAGAGCACGGAGTTGTT
GGTGATATGAGAGATGTTTGGCCAAATGCTCGTGTGAGAAAAAATGTATCCCTTATACGG
ACGTATCATGGATTCAAAGGTACCAAGCAGGGTCCACTCGAGTTCTTCAAGTTAATTTTC
CGAGCACTTTGCTTGTGCTGGGATCGCCAAACTCAGGATCTACATGTTGACTGGATCCTT
TTCAGAGGTAGATCTCTGATACCTGTCTCGTGTGAGGTGGTAAGCGACAACATTGATGGC
TTTTATCCTTCTTCTCATTATCCTGTATACGCCGAACTCATGCTTCCTCGATCAGTGAGG
CTAATCGAAGCTCCCCCTGAAAACGGAAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400019773
PEP Infomation

pacid=37434820 transcript=PGSC0003DMT400029064 locus=PGSC0003DMG400011184 ID=PGSC0003DMT400029064.v4.03 annot-version=v4.03
Sequence

MSVSLSVMTFNLLEDQLEDSPNSWEKRKDLCISVITSYSPMILCTQQGVKSQLDYIQQCL
QGYEQFGISRKGAEDTSDQHCTIFYDKEKVELLEGGTFWLSESPSVPGSMSWGSTVPCTA
TWATFQLKGAEPPGFSFQIVNTTMDEFSPRARRRGALLTWQHIASLPPSLSVVYCGGFNT
QKESTTGRFLLGRSREHGVVGDMRDVWPNARVRKNVSLIRTYHGFKGTKQGPLEFFKLIF
RALCLCWDRQTQDLHVDWILFRGRSLIPVSCEVVSDNIDGFYPSSHYPVYAELMLPRSVR
LIEAPPENGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400029064
Transcript Infomation

pacid=37434820 locus=PGSC0003DMG400011184 ID=PGSC0003DMT400029064.v4.03 annot-version=v4.03
Sequence

ATGAGTGTTTCTTTGAGTGTAATGACTTTTAATCTTCTTGAAGATCAGTTAGAGGACAGT
CCAAACTCATGGGAGAAGAGGAAAGATTTGTGTATAAGTGTTATTACAAGTTATTCTCCT
ATGATTCTCTGTACCCAACAAGGTGTGAAGTCACAGTTGGACTATATTCAGCAGTGCTTG
CAAGGTTATGAACAGTTTGGAATATCAAGGAAAGGAGCTGAAGACACTTCTGATCAGCAC
TGTACCATATTTTACGACAAGGAAAAGGTTGAGCTTTTAGAAGGGGGAACATTTTGGTTG
TCTGAATCACCTTCGGTGCCTGGAAGTATGTCTTGGGGTTCTACAGTACCATGCACCGCA
ACATGGGCAACATTCCAGCTGAAAGGCGCTGAGCCGCCAGGTTTTTCATTTCAGATTGTT
AATACAACCATGGATGAGTTCAGTCCCCGTGCTCGCAGGCGAGGTGCTTTGCTCACTTGG
CAGCATATTGCATCCTTGCCCCCTAGCTTATCCGTCGTGTACTGTGGAGGATTTAATACC
CAAAAGGAATCCACTACAGGTCGTTTTCTTCTTGGGAGATCTAGAGAGCACGGAGTTGTT
GGTGATATGAGAGATGTTTGGCCAAATGCTCGTGTGAGAAAAAATGTATCCCTTATACGG
ACGTATCATGGATTCAAAGGTACCAAGCAGGGTCCACTCGAGTTCTTCAAGTTAATTTTC
CGAGCACTTTGCTTGTGCTGGGATCGCCAAACTCAGGATCTACATGTTGACTGGATCCTT
TTCAGAGGTAGATCTCTGATACCTGTCTCGTGTGAGGTGGTAAGCGACAACATTGATGGC
TTTTATCCTTCTTCTCATTATCCTGTATACGCCGAACTCATGCTTCCTCGATCAGTGAGG
CTAATCGAAGCTCCCCCTGAAAACGGAAGCTAA