Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028996
CDS Infomation

pacid=37433763 polypeptide=PGSC0003DMP400019718 locus=PGSC0003DMG400011161 ID=PGSC0003DMT400028996.v4.03 annot-version=v4.03
Sequence

ATGGCAAATCAACCCTCTTCTTACCCAATTCTTTGTGCTTCCTTCAATCAAGACCACAGT
TGCTTTGCTATTGGAACAAGGGAAGGGTTCAAAATTTTTGATTGTAAAACTGGAAGGCTC
CTTTATGAAAGAGTTGCTGGAGCATTTATTATAGTAGAAATGTTGTTTAGCTCAAGCCTT
CTCGCAATTGTTGGAGCTGGTGAACAGCCGTCTTTGTCACCTCGAAGACTGTGTTTGTTT
AATACTGTGACTGGAGTAGCTCTTGAGGAACTTAACTTCTTAACTTCAATCCTTGCTGTT
CGCATGAATAAGAAAAGATTGATTGTCATATTGCAGGAGAAGACATTTATTTATGATATA
AATAGTCTTAAGATACTGGACACAATTGATACGGTGCCGAATCCAAAAGGACTTTGTGCA
TTTTCACCCAGCTTGGATGGTTCATTTTTGGCCCTTCCAGCAAGTACAACCAAAGGATCA
TTGTTAGTCTATAATGTTTCTGACCTCCGTTTGCACTGTGAGATAGATGCTCATCGCTCA
CCATTGGCTGTCTTGAGTCTTTCATCAGGTGGAACTCACATTGCAACAGCATCTGAACAA
GGGACCATGATCAGAATTCATCTTGTTTCAGATGCAACTAAGTCGTATAGCTTCAGGAGA
GGATCATACTCTTCAAATATCTTTTCTTTGTCATTCGCGCCAGCGGCAGAACTTCCAGAT
ATTCTTCTTGCGACTAGTTCTTCTGGTTCTGTTCATGTTTTCTCTTTGGGTTCACCCCCA
AATCAAAGGTCTTCTGGTCTTCTAGGATCAATAAAAGTACCTCATACTATTAACGATGCC
CTGGATCCTGCTCAGCATTGCATACTGCATCATGCTGTCCCGGCTGGCGTGAGAAGTAAT
ACGTTGATCCGCAAAATAGAGAAATTTGACGGGACAGCAACACCTGAACATGTGGTACTA
AGAGCCACTATACCTATGATCACCTATGGCGGATACTTCCTGGAGTACGTCTACAACGTC
AACCATCAGAACAAGTCTTCGTGGACCTTAGAACGAGAATTCAATCTATTAACAGCAGAA
ACATCCTCGTTACCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400019718
PEP Infomation

pacid=37433763 transcript=PGSC0003DMT400028996 locus=PGSC0003DMG400011161 ID=PGSC0003DMT400028996.v4.03 annot-version=v4.03
Sequence

MANQPSSYPILCASFNQDHSCFAIGTREGFKIFDCKTGRLLYERVAGAFIIVEMLFSSSL
LAIVGAGEQPSLSPRRLCLFNTVTGVALEELNFLTSILAVRMNKKRLIVILQEKTFIYDI
NSLKILDTIDTVPNPKGLCAFSPSLDGSFLALPASTTKGSLLVYNVSDLRLHCEIDAHRS
PLAVLSLSSGGTHIATASEQGTMIRIHLVSDATKSYSFRRGSYSSNIFSLSFAPAAELPD
ILLATSSSGSVHVFSLGSPPNQRSSGLLGSIKVPHTINDALDPAQHCILHHAVPAGVRSN
TLIRKIEKFDGTATPEHVVLRATIPMITYGGYFLEYVYNVNHQNKSSWTLEREFNLLTAE
TSSLP*

Transcript Sequence

Transcript ID

PGSC0003DMT400028996
Transcript Infomation

pacid=37433763 locus=PGSC0003DMG400011161 ID=PGSC0003DMT400028996.v4.03 annot-version=v4.03
Sequence

ATGGCAAATCAACCCTCTTCTTACCCAATTCTTTGTGCTTCCTTCAATCAAGACCACAGT
TGCTTTGCTATTGGAACAAGGGAAGGGTTCAAAATTTTTGATTGTAAAACTGGAAGGCTC
CTTTATGAAAGAGTTGCTGGAGCATTTATTATAGTAGAAATGTTGTTTAGCTCAAGCCTT
CTCGCAATTGTTGGAGCTGGTGAACAGCCGTCTTTGTCACCTCGAAGACTGTGTTTGTTT
AATACTGTGACTGGAGTAGCTCTTGAGGAACTTAACTTCTTAACTTCAATCCTTGCTGTT
CGCATGAATAAGAAAAGATTGATTGTCATATTGCAGGAGAAGACATTTATTTATGATATA
AATAGTCTTAAGATACTGGACACAATTGATACGGTGCCGAATCCAAAAGGACTTTGTGCA
TTTTCACCCAGCTTGGATGGTTCATTTTTGGCCCTTCCAGCAAGTACAACCAAAGGATCA
TTGTTAGTCTATAATGTTTCTGACCTCCGTTTGCACTGTGAGATAGATGCTCATCGCTCA
CCATTGGCTGTCTTGAGTCTTTCATCAGGTGGAACTCACATTGCAACAGCATCTGAACAA
GGGACCATGATCAGAATTCATCTTGTTTCAGATGCAACTAAGTCGTATAGCTTCAGGAGA
GGATCATACTCTTCAAATATCTTTTCTTTGTCATTCGCGCCAGCGGCAGAACTTCCAGAT
ATTCTTCTTGCGACTAGTTCTTCTGGTTCTGTTCATGTTTTCTCTTTGGGTTCACCCCCA
AATCAAAGGTCTTCTGGTCTTCTAGGATCAATAAAAGTACCTCATACTATTAACGATGCC
CTGGATCCTGCTCAGCATTGCATACTGCATCATGCTGTCCCGGCTGGCGTGAGAAGTAAT
ACGTTGATCCGCAAAATAGAGAAATTTGACGGGACAGCAACACCTGAACATGTGGTACTA
AGAGCCACTATACCTATGATCACCTATGGCGGATACTTCCTGGAGTACGTCTACAACGTC
AACCATCAGAACAAGTCTTCGTGGACCTTAGAACGAGAATTCAATCTATTAACAGCAGAA
ACATCCTCGTTACCATGA