Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028987
CDS Infomation

pacid=37434291 polypeptide=PGSC0003DMP400019711 locus=PGSC0003DMG400011158 ID=PGSC0003DMT400028987.v4.03 annot-version=v4.03
Sequence

ATGCCGATAGATACTTCCGCTAAGATCTTCGTCGCCGGTCACCGTGGACTCGTCGGATCC
GCCGTGGTTCGGAAACTTTACCAATTAGGCTGCACAAATCTCCTCCTCCGTACACATTCC
GATCTCGATCTCACTAACCAATCCGCCGTCGAATCCTTCTTCGCCGACGAGAAACCTCAA
TACGTCATCCTCGCCGCCGCGAAGGTCGGCGGCATACACGCAAACAATACTTACCCAGCT
GATTTCATCACTATAAATCTTCAAATCCAAACAAACGTCATCGTTTCATCCTTCAATCAC
AAAGTTCAGAAGCTTCTGTTCCTTGGTTCTTCATGTATTTACCCTAAATTTGCTCCTCAA
CCAATTCCCGAAAATGCACTTTTAACTGCCCCTTTGGAACCTACAAATGAATGGTATGCA
ATTGCGAAAATTGCTGGTATTAAAATGTGTCAAGCTTATAGATTGCAGCATAACTTTGAT
GCAATTTCAGCAATGCCCACGAATTTATATGGTACGAATGACAATTTCCATCCTGAGAAT
TCTCATGTTTTGCCTGCTTTGTTACGTAGATTTCATGAAGCAAAAGTTAACAATCTTGAT
AAAGTTGTTGTGTGGGGAACTGGTTCTCCTTTAAGGGAATTTTTACATGTCGATGATTTA
GCCGATGCAGTAGTGTTTTTGTTGGAGAATTATAGTGATTTAGAACATGTTAATGTGGGG
AGTGGAAAGGAAGTGAGTATAAAGGAGCTAGCTGAATTGGTGAAGGAAGTTGTGGGGTTT
AAAGGAGAGTTGGTTTGGGATTCGACTAAGCCGGATGGGACACCAAGGAAGCTTATGGAT
ACTTCAAAGCTTGTTGGATTAGGTTGGACGCCAAAGATTTCGCTCCGGGATGGTCTTGTT
GATACCTACAAATGGTACTTGGAGAATTATGGCAAGCAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400019711
PEP Infomation

pacid=37434291 transcript=PGSC0003DMT400028987 locus=PGSC0003DMG400011158 ID=PGSC0003DMT400028987.v4.03 annot-version=v4.03
Sequence

MPIDTSAKIFVAGHRGLVGSAVVRKLYQLGCTNLLLRTHSDLDLTNQSAVESFFADEKPQ
YVILAAAKVGGIHANNTYPADFITINLQIQTNVIVSSFNHKVQKLLFLGSSCIYPKFAPQ
PIPENALLTAPLEPTNEWYAIAKIAGIKMCQAYRLQHNFDAISAMPTNLYGTNDNFHPEN
SHVLPALLRRFHEAKVNNLDKVVVWGTGSPLREFLHVDDLADAVVFLLENYSDLEHVNVG
SGKEVSIKELAELVKEVVGFKGELVWDSTKPDGTPRKLMDTSKLVGLGWTPKISLRDGLV
DTYKWYLENYGKQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400028987
Transcript Infomation

pacid=37434291 locus=PGSC0003DMG400011158 ID=PGSC0003DMT400028987.v4.03 annot-version=v4.03
Sequence

ATGCCGATAGATACTTCCGCTAAGATCTTCGTCGCCGGTCACCGTGGACTCGTCGGATCC
GCCGTGGTTCGGAAACTTTACCAATTAGGCTGCACAAATCTCCTCCTCCGTACACATTCC
GATCTCGATCTCACTAACCAATCCGCCGTCGAATCCTTCTTCGCCGACGAGAAACCTCAA
TACGTCATCCTCGCCGCCGCGAAGGTCGGCGGCATACACGCAAACAATACTTACCCAGCT
GATTTCATCACTATAAATCTTCAAATCCAAACAAACGTCATCGTTTCATCCTTCAATCAC
AAAGTTCAGAAGCTTCTGTTCCTTGGTTCTTCATGTATTTACCCTAAATTTGCTCCTCAA
CCAATTCCCGAAAATGCACTTTTAACTGCCCCTTTGGAACCTACAAATGAATGGTATGCA
ATTGCGAAAATTGCTGGTATTAAAATGTGTCAAGCTTATAGATTGCAGCATAACTTTGAT
GCAATTTCAGCAATGCCCACGAATTTATATGGTACGAATGACAATTTCCATCCTGAGAAT
TCTCATGTTTTGCCTGCTTTGTTACGTAGATTTCATGAAGCAAAAGTTAACAATCTTGAT
AAAGTTGTTGTGTGGGGAACTGGTTCTCCTTTAAGGGAATTTTTACATGTCGATGATTTA
GCCGATGCAGTAGTGTTTTTGTTGGAGAATTATAGTGATTTAGAACATGTTAATGTGGGG
AGTGGAAAGGAAGTGAGTATAAAGGAGCTAGCTGAATTGGTGAAGGAAGTTGTGGGGTTT
AAAGGAGAGTTGGTTTGGGATTCGACTAAGCCGGATGGGACACCAAGGAAGCTTATGGAT
ACTTCAAAGCTTGTTGGATTAGGTTGGACGCCAAAGATTTCGCTCCGGGATGGTCTTGTT
GATACCTACAAATGGTACTTGGAGAATTATGGCAAGCAATAG