Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028973
CDS Infomation

pacid=37434624 polypeptide=PGSC0003DMP400019700 locus=PGSC0003DMG400011153 ID=PGSC0003DMT400028973.v4.03 annot-version=v4.03
Sequence

ATGAGTTCAAATGTTTCATCTGGTGTGGTACAAGTAGGGAAGCTTTTGGTTCTTATTGCT
GAAAATGGGCAATCATATGAACTGAATTGTGATGAATATACTCTTGTTGATGCTGTCCAG
CAATACCTAGAGTCTGTTTCTGGGATTCCTGTTGGTGATCAGCTTCTTTTGTGCTTAGAT
GTGAAACTTGAATTGCATTGTCCCCTTTCTACTTACAAGCTTCCATCGGATGACCGGGAA
GTTATCTTGTTTAATAAAGCTAGAATGAGAAGCAATGCGCCACCTCCACTACCCGAGCAA
GTTGAGATGATTGATATTCTTGATCCTACATTACCATTGTCCTCTCATGACCCCCACCCT
TTGGATGATGCTACAGACCCTGCCTTAAAAGCCTTGCCTTCTTATGAGAGACAATTCAGG
TTCCACTTCCAACGCGGTCATGCCATTTACAGCCGTTCCCAAATGAGAATTGACATTTGT
GAGAGGCTTTCAAGAGAGCAGAAAGTGCAAGAGAGGGCGTTAGGGATTGCTAGGGGCAAC
CTGGATCACTTCTATGGGATGATACTTCAAAATTACAATGACTTTTTGAAGTGTTACTCC
CAGCAATATCGTAGCCATACTAACTTGCTGAATAATTTTGGAAGGGATATAGAGAAGTTG
AGGGCTTGCAAACTTCATGCTGCTTTGCAGACTGCTAACCGCAAGTGTTTGCTGGATTTC
GTGAAAGAAGAGAACTTGCGGAAGTTGGCAGATGATTGTAATAGTTCCCACAGGCAGTTT
GAGAATAAAGTGTCTGAATTTAAGCTCGAGTTTGGAGAGCTAGAGCACAATGCCAAGCAT
TTATTTTCTACAAAAGTTTCACATCTTATAAGGGAAGTTGAACTAGCTTTAAGAGACCAT
CAGAAGTATGTCAGTGAGCAGAAAAGCATAATGCAGGCTTTGAGCAAGGATGTGAATATG
GTCAAAAAGCTTGTGGATGACTGTTTGACCAATCAGTTATCATCTTCCCTCCGTCCACAT
GATGCTGTTTCAGCTTTGGGACCAATGTATGAATGCCATGAGAAAAGTTACCTTCCTAAG
ATGCAGGCTTGTGATGGTGAAATCTCCAATTTGGTTGAGTTCTGCAAGGATAAAAAGAAT
GAAATGAACATTCTTGTTCATAATTACATGCAAAAGGTAGCATATATCCAGTACACCATC
AAAGATATACGATGCAAATTTGCTGTTTTCCAGGAAGCTTTGAGGCGTCAAAGTGATTTA
TTCGAGCACTTAAAAGTGGTCCGAGGGATTGGTCCTGCATACAGGGCATGCCTTGCCGAA
GTGGTAAGAAGAAAAGCTGCAATGAAACTATATATGGGAATGGCTGGGCAATTAGCTGAA
CGGCTTGCAACCAGGAGGGAGGCAGAAGTTCGTAGAAGAGAGGAGTTTCTGAGGATAAAT
AGTACATACATTCCCCGGGATATTTTGGCTTCCATGGGACTGTATGATACCCCTAACCAC
TGTGATGTCAATATAACTCCTTTTGACACTAAATTGCTCGACGTTGATATCTCAGAAATA
GATCGCTATGCTCCTGAGTATCTATTGGGACTGTCTTCCAGAAGTGAAAAGCATGGGACC
TTAAAGAGTCCACTTTCCACGTCTAATGATGGTTCTCAGTTAGCGGAAGCTGAGATTACC
GACTTCACTGAGAAATTTGATTGTGAGGAATTACTTCAGGGCTCAGAGATTCTGGATATT
GCTGGAACTAGCAAAATGGAAGTGGAGAATGCAAAATTGAGGGCTGAACTTGCTTCTAAA
ATAGCCTTTATGTGTTCCACTTGTCCTGAATTTGATTATGAATCACTTGATGACAGTAAA
ATTGATAGTTTATTAAAAGAAGCAAGAGAGAAAACCTCTGAGGCTCTACATCATAAAGAA
GAGTATGAAAAACACCTCCATTCTATGCTTAAGGCGAAGCAAATTCAGTGTGAATCTTAT
GAAAAACGGATTCAGGAGTTGGAACAGAGGTTGTCTGATCATTACTCGCAAGGGCACACA
CATTCTGCTGATGAGGGTGTATCTAACTTAACTGTTTCAGCTGTGAAGAATGATGACAGC
AAATCAGATGTGTCAGGTGTTGGAGACACTCACATGCCTTGTATGCCTGCTGAAGTCATG
GATGAGGTTTCTTGTGCCTCTAGTTCATCAAATATAAAACCTGGCTCTAAACAAATCAAG
GAACAAGAAGGCTTAGATGACAATATGACAGATTCCTCTGGTATGATTAATCCTCAGTTG
GATTCATCTATGCTAGATCCACACCGTGATGAAGAGCATGAAAACCTTCCTGCGAAAGAC
AAGAAAGATACCACATTGGTTGGTGGAGATATGGCACTTGCGACAAGTTCCATGGCTGTG
AGCATATCCCAGGCTCAGACTGACATACCTTCTGAAGTAACTGCTGAACAAGGTTTGGAT
GCTAAAGCTAGAGAGGATCTTCTCCTGGAGTTGCAAGGTGTCCTGGCTGATAAATCGAAG
CTACTGGATGAAAGTGAAAGCAAGGTGAAATCCTTAACAGAGGAGATAGCCAAGCGGGTG
AGGGAGTTGGAGATCAGAGGGAAGCTTCTTGATGAATCTCAGATGAACTGTGCTCATTTA
GAAAATTGCCTTCATGAAGCAAGAGAGGAAGCTCAAACACATCTGTGTGCAGCTGATAGA
AGAGCCTCTGAGTATAGCGCATTGCGTGCTTCTGCAGTCAAAATGCGTGGCCTCTTTGAA
AGATTGAGAGTATGTGTTTTGTCCGGCGGTGTGGCTAGTTTGGCCGAGTCCTTGCGTGCA
TTATCTCAATCTTTATCCAATTCAATAAATGAAAAAGAGGAGGATGGCTCAGCTGAATTT
CGGGAATGCATCCGGGTACTTGCTGATAAAGTTGGTACATTATCAAGGCATCGAGCAGAG
CTGGCTGATAAATGTTCCAAATTTGATACTGCGAATAAGCAGGTATCAAAGGAGTTGGAA
GAAAAGAAAGATTTGGTTAACACACTCTACAAAAAGCATCAACACGAGAAGCAGGCAAAC
AAAGAGAAGATATCGTTTGGGCGTTTAGAAGTCCATGAGATTGCAGCATTTGTTCTCAAC
TCCACTGGAAACTATGAAGCTATCAATCGAAACTGCCCTCATTACTACCTCTCTGCAGAA
TCTGTTGCTCTGTTTACTGACCATCTTCCAAATCGTCCAAGCTATATTGTAGGGCTGGTT
GTGCATATTGAACGACAAACTGTGAGGTCGACACCCTCAACATCAGTTCGAGCTGACCAT
GATAGAGATCATTTAGATATACTGACTTCTGACACAGGAACCAGTCGTTTGTCCTTGAAT
TCAGGATCAACTACGAACCCGTATGGTCTTCCTGTTGGCTGTGAATACTTCGTCGTGACA
GTAGCCATGTTACCTGATACCACCATTCATTCACCAACTCCTTCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019700
PEP Infomation

pacid=37434624 transcript=PGSC0003DMT400028973 locus=PGSC0003DMG400011153 ID=PGSC0003DMT400028973.v4.03 annot-version=v4.03
Sequence

MSSNVSSGVVQVGKLLVLIAENGQSYELNCDEYTLVDAVQQYLESVSGIPVGDQLLLCLD
VKLELHCPLSTYKLPSDDREVILFNKARMRSNAPPPLPEQVEMIDILDPTLPLSSHDPHP
LDDATDPALKALPSYERQFRFHFQRGHAIYSRSQMRIDICERLSREQKVQERALGIARGN
LDHFYGMILQNYNDFLKCYSQQYRSHTNLLNNFGRDIEKLRACKLHAALQTANRKCLLDF
VKEENLRKLADDCNSSHRQFENKVSEFKLEFGELEHNAKHLFSTKVSHLIREVELALRDH
QKYVSEQKSIMQALSKDVNMVKKLVDDCLTNQLSSSLRPHDAVSALGPMYECHEKSYLPK
MQACDGEISNLVEFCKDKKNEMNILVHNYMQKVAYIQYTIKDIRCKFAVFQEALRRQSDL
FEHLKVVRGIGPAYRACLAEVVRRKAAMKLYMGMAGQLAERLATRREAEVRRREEFLRIN
STYIPRDILASMGLYDTPNHCDVNITPFDTKLLDVDISEIDRYAPEYLLGLSSRSEKHGT
LKSPLSTSNDGSQLAEAEITDFTEKFDCEELLQGSEILDIAGTSKMEVENAKLRAELASK
IAFMCSTCPEFDYESLDDSKIDSLLKEAREKTSEALHHKEEYEKHLHSMLKAKQIQCESY
EKRIQELEQRLSDHYSQGHTHSADEGVSNLTVSAVKNDDSKSDVSGVGDTHMPCMPAEVM
DEVSCASSSSNIKPGSKQIKEQEGLDDNMTDSSGMINPQLDSSMLDPHRDEEHENLPAKD
KKDTTLVGGDMALATSSMAVSISQAQTDIPSEVTAEQGLDAKAREDLLLELQGVLADKSK
LLDESESKVKSLTEEIAKRVRELEIRGKLLDESQMNCAHLENCLHEAREEAQTHLCAADR
RASEYSALRASAVKMRGLFERLRVCVLSGGVASLAESLRALSQSLSNSINEKEEDGSAEF
RECIRVLADKVGTLSRHRAELADKCSKFDTANKQVSKELEEKKDLVNTLYKKHQHEKQAN
KEKISFGRLEVHEIAAFVLNSTGNYEAINRNCPHYYLSAESVALFTDHLPNRPSYIVGLV
VHIERQTVRSTPSTSVRADHDRDHLDILTSDTGTSRLSLNSGSTTNPYGLPVGCEYFVVT
VAMLPDTTIHSPTPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400028973
Transcript Infomation

pacid=37434624 locus=PGSC0003DMG400011153 ID=PGSC0003DMT400028973.v4.03 annot-version=v4.03
Sequence

ATGAGTTCAAATGTTTCATCTGGTGTGGTACAAGTAGGGAAGCTTTTGGTTCTTATTGCT
GAAAATGGGCAATCATATGAACTGAATTGTGATGAATATACTCTTGTTGATGCTGTCCAG
CAATACCTAGAGTCTGTTTCTGGGATTCCTGTTGGTGATCAGCTTCTTTTGTGCTTAGAT
GTGAAACTTGAATTGCATTGTCCCCTTTCTACTTACAAGCTTCCATCGGATGACCGGGAA
GTTATCTTGTTTAATAAAGCTAGAATGAGAAGCAATGCGCCACCTCCACTACCCGAGCAA
GTTGAGATGATTGATATTCTTGATCCTACATTACCATTGTCCTCTCATGACCCCCACCCT
TTGGATGATGCTACAGACCCTGCCTTAAAAGCCTTGCCTTCTTATGAGAGACAATTCAGG
TTCCACTTCCAACGCGGTCATGCCATTTACAGCCGTTCCCAAATGAGAATTGACATTTGT
GAGAGGCTTTCAAGAGAGCAGAAAGTGCAAGAGAGGGCGTTAGGGATTGCTAGGGGCAAC
CTGGATCACTTCTATGGGATGATACTTCAAAATTACAATGACTTTTTGAAGTGTTACTCC
CAGCAATATCGTAGCCATACTAACTTGCTGAATAATTTTGGAAGGGATATAGAGAAGTTG
AGGGCTTGCAAACTTCATGCTGCTTTGCAGACTGCTAACCGCAAGTGTTTGCTGGATTTC
GTGAAAGAAGAGAACTTGCGGAAGTTGGCAGATGATTGTAATAGTTCCCACAGGCAGTTT
GAGAATAAAGTGTCTGAATTTAAGCTCGAGTTTGGAGAGCTAGAGCACAATGCCAAGCAT
TTATTTTCTACAAAAGTTTCACATCTTATAAGGGAAGTTGAACTAGCTTTAAGAGACCAT
CAGAAGTATGTCAGTGAGCAGAAAAGCATAATGCAGGCTTTGAGCAAGGATGTGAATATG
GTCAAAAAGCTTGTGGATGACTGTTTGACCAATCAGTTATCATCTTCCCTCCGTCCACAT
GATGCTGTTTCAGCTTTGGGACCAATGTATGAATGCCATGAGAAAAGTTACCTTCCTAAG
ATGCAGGCTTGTGATGGTGAAATCTCCAATTTGGTTGAGTTCTGCAAGGATAAAAAGAAT
GAAATGAACATTCTTGTTCATAATTACATGCAAAAGGTAGCATATATCCAGTACACCATC
AAAGATATACGATGCAAATTTGCTGTTTTCCAGGAAGCTTTGAGGCGTCAAAGTGATTTA
TTCGAGCACTTAAAAGTGGTCCGAGGGATTGGTCCTGCATACAGGGCATGCCTTGCCGAA
GTGGTAAGAAGAAAAGCTGCAATGAAACTATATATGGGAATGGCTGGGCAATTAGCTGAA
CGGCTTGCAACCAGGAGGGAGGCAGAAGTTCGTAGAAGAGAGGAGTTTCTGAGGATAAAT
AGTACATACATTCCCCGGGATATTTTGGCTTCCATGGGACTGTATGATACCCCTAACCAC
TGTGATGTCAATATAACTCCTTTTGACACTAAATTGCTCGACGTTGATATCTCAGAAATA
GATCGCTATGCTCCTGAGTATCTATTGGGACTGTCTTCCAGAAGTGAAAAGCATGGGACC
TTAAAGAGTCCACTTTCCACGTCTAATGATGGTTCTCAGTTAGCGGAAGCTGAGATTACC
GACTTCACTGAGAAATTTGATTGTGAGGAATTACTTCAGGGCTCAGAGATTCTGGATATT
GCTGGAACTAGCAAAATGGAAGTGGAGAATGCAAAATTGAGGGCTGAACTTGCTTCTAAA
ATAGCCTTTATGTGTTCCACTTGTCCTGAATTTGATTATGAATCACTTGATGACAGTAAA
ATTGATAGTTTATTAAAAGAAGCAAGAGAGAAAACCTCTGAGGCTCTACATCATAAAGAA
GAGTATGAAAAACACCTCCATTCTATGCTTAAGGCGAAGCAAATTCAGTGTGAATCTTAT
GAAAAACGGATTCAGGAGTTGGAACAGAGGTTGTCTGATCATTACTCGCAAGGGCACACA
CATTCTGCTGATGAGGGTGTATCTAACTTAACTGTTTCAGCTGTGAAGAATGATGACAGC
AAATCAGATGTGTCAGGTGTTGGAGACACTCACATGCCTTGTATGCCTGCTGAAGTCATG
GATGAGGTTTCTTGTGCCTCTAGTTCATCAAATATAAAACCTGGCTCTAAACAAATCAAG
GAACAAGAAGGCTTAGATGACAATATGACAGATTCCTCTGGTATGATTAATCCTCAGTTG
GATTCATCTATGCTAGATCCACACCGTGATGAAGAGCATGAAAACCTTCCTGCGAAAGAC
AAGAAAGATACCACATTGGTTGGTGGAGATATGGCACTTGCGACAAGTTCCATGGCTGTG
AGCATATCCCAGGCTCAGACTGACATACCTTCTGAAGTAACTGCTGAACAAGGTTTGGAT
GCTAAAGCTAGAGAGGATCTTCTCCTGGAGTTGCAAGGTGTCCTGGCTGATAAATCGAAG
CTACTGGATGAAAGTGAAAGCAAGGTGAAATCCTTAACAGAGGAGATAGCCAAGCGGGTG
AGGGAGTTGGAGATCAGAGGGAAGCTTCTTGATGAATCTCAGATGAACTGTGCTCATTTA
GAAAATTGCCTTCATGAAGCAAGAGAGGAAGCTCAAACACATCTGTGTGCAGCTGATAGA
AGAGCCTCTGAGTATAGCGCATTGCGTGCTTCTGCAGTCAAAATGCGTGGCCTCTTTGAA
AGATTGAGAGTATGTGTTTTGTCCGGCGGTGTGGCTAGTTTGGCCGAGTCCTTGCGTGCA
TTATCTCAATCTTTATCCAATTCAATAAATGAAAAAGAGGAGGATGGCTCAGCTGAATTT
CGGGAATGCATCCGGGTACTTGCTGATAAAGTTGGTACATTATCAAGGCATCGAGCAGAG
CTGGCTGATAAATGTTCCAAATTTGATACTGCGAATAAGCAGGTATCAAAGGAGTTGGAA
GAAAAGAAAGATTTGGTTAACACACTCTACAAAAAGCATCAACACGAGAAGCAGGCAAAC
AAAGAGAAGATATCGTTTGGGCGTTTAGAAGTCCATGAGATTGCAGCATTTGTTCTCAAC
TCCACTGGAAACTATGAAGCTATCAATCGAAACTGCCCTCATTACTACCTCTCTGCAGAA
TCTGTTGCTCTGTTTACTGACCATCTTCCAAATCGTCCAAGCTATATTGTAGGGCTGGTT
GTGCATATTGAACGACAAACTGTGAGGTCGACACCCTCAACATCAGTTCGAGCTGACCAT
GATAGAGATCATTTAGATATACTGACTTCTGACACAGGAACCAGTCGTTTGTCCTTGAAT
TCAGGATCAACTACGAACCCGTATGGTCTTCCTGTTGGCTGTGAATACTTCGTCGTGACA
GTAGCCATGTTACCTGATACCACCATTCATTCACCAACTCCTTCCTGA