Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028956
CDS Infomation

pacid=37434621 polypeptide=PGSC0003DMP400019688 locus=PGSC0003DMG400011147 ID=PGSC0003DMT400028956.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTCTCACCACTAGTACCTCCTTCACCTTGACACCCATTTGCTCTAAGCCCTTA
ACCAACAAACCCCTTTTCCTCCCTTCCCTTAATTCTTCCATTTTTGGGCTTCGATTTTAT
ATTCCTCAGCTTCGTTCTTGCCCTTCACTTATCTGCTATTCCGCCACTATCTCCGCCCGA
TACGGAGGAGGTGGTGGTAGAGGAGGATTCAGACCGCCCCCACGTTCTGAGGAAGATGAA
GCACTTGATATTTCATCTATCAGGTCAGACAAGGTTAGGCTCATTGATGATAAGCAGAAC
ATGTTGGGGATAGTGTCGAAAATGGAAGCTCTTCAGAGAGCTGAGGATGCAAGCCTTGAC
TTGGTGATTCTATCGCCAGAAGCAGACCCGCCGGTCGTCAAAATTATGGATTACAATAAG
TATAAGTATGAACTGCAAAAGAAGAAAAAGGAGCAGCAAAAGAAAAATGCTGCCAGCCGC
ATGGATTTGAAGGAGCTCAAAATGGGTTATAATATTGATTCTCACGATTATTCAGTGCGT
TTGAAAGCTGCTCAGAAGTTCTTGAAAGATGGTGACAAGGTAAAAATCATAGTGAACTTA
AAAGGCCGTGAAAATGAGTTCAGAAATAATGCTATTGAGCTACTTAGGCGTTTTCAGAAT
GATGTTGGTGAGCTTGCAACCGAGGAGAACAAGAATTTCAGGGATAGGAACGTCTTCATA
GTTTTGGTACCGAATAAGGCTATTGTACAGAAAGCTCCTGAGCAACCGAAGAAAAAGGAA
AAACCAGCAACTGAAGTTTCAGCCAGTGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019688
PEP Infomation

pacid=37434621 transcript=PGSC0003DMT400028956 locus=PGSC0003DMG400011147 ID=PGSC0003DMT400028956.v4.03 annot-version=v4.03
Sequence

MAGLTTSTSFTLTPICSKPLTNKPLFLPSLNSSIFGLRFYIPQLRSCPSLICYSATISAR
YGGGGGRGGFRPPPRSEEDEALDISSIRSDKVRLIDDKQNMLGIVSKMEALQRAEDASLD
LVILSPEADPPVVKIMDYNKYKYELQKKKKEQQKKNAASRMDLKELKMGYNIDSHDYSVR
LKAAQKFLKDGDKVKIIVNLKGRENEFRNNAIELLRRFQNDVGELATEENKNFRDRNVFI
VLVPNKAIVQKAPEQPKKKEKPATEVSASV*

Transcript Sequence

Transcript ID

PGSC0003DMT400028956
Transcript Infomation

pacid=37434621 locus=PGSC0003DMG400011147 ID=PGSC0003DMT400028956.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTCTCACCACTAGTACCTCCTTCACCTTGACACCCATTTGCTCTAAGCCCTTA
ACCAACAAACCCCTTTTCCTCCCTTCCCTTAATTCTTCCATTTTTGGGCTTCGATTTTAT
ATTCCTCAGCTTCGTTCTTGCCCTTCACTTATCTGCTATTCCGCCACTATCTCCGCCCGA
TACGGAGGAGGTGGTGGTAGAGGAGGATTCAGACCGCCCCCACGTTCTGAGGAAGATGAA
GCACTTGATATTTCATCTATCAGGTCAGACAAGGTTAGGCTCATTGATGATAAGCAGAAC
ATGTTGGGGATAGTGTCGAAAATGGAAGCTCTTCAGAGAGCTGAGGATGCAAGCCTTGAC
TTGGTGATTCTATCGCCAGAAGCAGACCCGCCGGTCGTCAAAATTATGGATTACAATAAG
TATAAGTATGAACTGCAAAAGAAGAAAAAGGAGCAGCAAAAGAAAAATGCTGCCAGCCGC
ATGGATTTGAAGGAGCTCAAAATGGGTTATAATATTGATTCTCACGATTATTCAGTGCGT
TTGAAAGCTGCTCAGAAGTTCTTGAAAGATGGTGACAAGGTAAAAATCATAGTGAACTTA
AAAGGCCGTGAAAATGAGTTCAGAAATAATGCTATTGAGCTACTTAGGCGTTTTCAGAAT
GATGTTGGTGAGCTTGCAACCGAGGAGAACAAGAATTTCAGGGATAGGAACGTCTTCATA
GTTTTGGTACCGAATAAGGCTATTGTACAGAAAGCTCCTGAGCAACCGAAGAAAAAGGAA
AAACCAGCAACTGAAGTTTCAGCCAGTGTTTGA