Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028945
CDS Infomation

pacid=37433437 polypeptide=PGSC0003DMP400019679 locus=PGSC0003DMG400011142 ID=PGSC0003DMT400028945.v4.03 annot-version=v4.03
Sequence

ATGTCTAAGAAGATGAAAAGGGTTGTTTTAGAATCATCACCTTATGTGGTGTTTGAGGAG
AATAATGCTAGATTGAAGCATCAGACTCTATTGCAGGACTATCAAGTACTCTATAAGGAC
ACTAATGACACGAGGAACAAATTGGAGGACCTGAAAATGAGGAAACAAAGATTACTTGCT
GAAGTTCATTTCTTGCGCCGAAGACACAAATACCTATTGCAGATGAAGTCATCAAGTCAT
CCTGAACAGCAAGAACGAGCAGCCCTGCTGAACTCAGAGTTTTACTGTATAAATGGGGTG
AATGATCGATTTCCCAGCAAAAAGAAGGCGAAGCAACACAAACTGCCCCCTCTTCCTGGG
CTGAAACAGAAAGCGAGGATTCAAGTTGCAAAGGAAGCTTCTTCGCAGAAGACACCTTCT
GATATTCTTGTGAATCACAAGCAGGCATTACATATTGGGAAAGACGCTGTTCAGCGTAGT
ACAGTTTCAGGTTTGAAGCATAAATCAAGAGTGTATAGTGGTAAGGAAATGCTGCTCCGA
AACGCAGCTCCAGCGTTTGATTTGAATCAGAATGACAGGTCATTCGCTGGGAATGGTTTT
GTTTCGAGGAGTACCACACCTGTCTTTGATTTGAATCAGGAAACTGGTCATGTTGGGAAA
GTTGTATTGCCTAGTCAAGCTCCAGTCATTGATTTGAATGAAATCTCGGTAAGTATCTCA
ACAAGAAATCCCAAGTTTGAACTTGTGTGTATAGACGCTATGACATTTCTATGGAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400019679
PEP Infomation

pacid=37433437 transcript=PGSC0003DMT400028945 locus=PGSC0003DMG400011142 ID=PGSC0003DMT400028945.v4.03 annot-version=v4.03
Sequence

MSKKMKRVVLESSPYVVFEENNARLKHQTLLQDYQVLYKDTNDTRNKLEDLKMRKQRLLA
EVHFLRRRHKYLLQMKSSSHPEQQERAALLNSEFYCINGVNDRFPSKKKAKQHKLPPLPG
LKQKARIQVAKEASSQKTPSDILVNHKQALHIGKDAVQRSTVSGLKHKSRVYSGKEMLLR
NAAPAFDLNQNDRSFAGNGFVSRSTTPVFDLNQETGHVGKVVLPSQAPVIDLNEISVSIS
TRNPKFELVCIDAMTFLWK*

Transcript Sequence

Transcript ID

PGSC0003DMT400028945
Transcript Infomation

pacid=37433437 locus=PGSC0003DMG400011142 ID=PGSC0003DMT400028945.v4.03 annot-version=v4.03
Sequence

ATGTCTAAGAAGATGAAAAGGGTTGTTTTAGAATCATCACCTTATGTGGTGTTTGAGGAG
AATAATGCTAGATTGAAGCATCAGACTCTATTGCAGGACTATCAAGTACTCTATAAGGAC
ACTAATGACACGAGGAACAAATTGGAGGACCTGAAAATGAGGAAACAAAGATTACTTGCT
GAAGTTCATTTCTTGCGCCGAAGACACAAATACCTATTGCAGATGAAGTCATCAAGTCAT
CCTGAACAGCAAGAACGAGCAGCCCTGCTGAACTCAGAGTTTTACTGTATAAATGGGGTG
AATGATCGATTTCCCAGCAAAAAGAAGGCGAAGCAACACAAACTGCCCCCTCTTCCTGGG
CTGAAACAGAAAGCGAGGATTCAAGTTGCAAAGGAAGCTTCTTCGCAGAAGACACCTTCT
GATATTCTTGTGAATCACAAGCAGGCATTACATATTGGGAAAGACGCTGTTCAGCGTAGT
ACAGTTTCAGGTTTGAAGCATAAATCAAGAGTGTATAGTGGTAAGGAAATGCTGCTCCGA
AACGCAGCTCCAGCGTTTGATTTGAATCAGAATGACAGGTCATTCGCTGGGAATGGTTTT
GTTTCGAGGAGTACCACACCTGTCTTTGATTTGAATCAGGAAACTGGTCATGTTGGGAAA
GTTGTATTGCCTAGTCAAGCTCCAGTCATTGATTTGAATGAAATCTCGGTAAGTATCTCA
ACAAGAAATCCCAAGTTTGAACTTGTGTGTATAGACGCTATGACATTTCTATGGAAGTAA